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  5. Zm00001e041130_P001

Zm00001e041130_P001 (Zm00001e041130)


Aliases : Zm00001e041130

Description : RRF translation ribosome recycling factor


Gene families : OG0006739 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006739_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e041130_P001
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AT3G01800 No alias Ribosome recycling factor 0.03 OrthoFinder output from all 47 species
Als_g09350 No alias translation ribosome recycling factor *(RRF) & original... 0.03 OrthoFinder output from all 47 species
Aop_g14062 No alias translation ribosome recycling factor *(RRF) & original... 0.04 OrthoFinder output from all 47 species
Ceric.03G014600.1 Ceric.03G014600 translation ribosome recycling factor *(RRF) & original... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000350.30 No alias Protein biosynthesis.organelle translation... 0.01 OrthoFinder output from all 47 species
Ehy_g17932 No alias translation ribosome recycling factor *(RRF) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01001818001 No alias Protein biosynthesis.organelle translation... 0.08 OrthoFinder output from all 47 species
LOC_Os04g41300.1 LOC_Os04g41300 RRF translation ribosome recycling factor 0.1 OrthoFinder output from all 47 species
Nbi_g00582 No alias translation ribosome recycling factor *(RRF) & original... 0.02 OrthoFinder output from all 47 species
Pp3c24_18680V3.1 Pp3c24_18680 Ribosome recycling factor 0.03 OrthoFinder output from all 47 species
Solyc11g007740.2.1 Solyc11g007740 RRF translation ribosome recycling factor 0.1 OrthoFinder output from all 47 species
Spa_g21753 No alias translation ribosome recycling factor *(RRF) & original... 0.02 OrthoFinder output from all 47 species
Tin_g19048 No alias translation ribosome recycling factor *(RRF) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004827 proline-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006433 prolyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR023584 Ribosome_recyc_fac_dom 96 256
No external refs found!