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  5. Zm00001e038238_P001

Zm00001e038238_P001 (VSR2;2, ATVSR3,...)


Aliases : VSR2;2, ATVSR3, BP80-2;2, VSR3, Zm00001e038238

Description : vacuolar sorting receptor (VSR)


Gene families : OG0000585 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000585_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e038238_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00189440 VSR6, VSR3;3,... Vesicle trafficking.endomembrane trafficking.vacuolar... 0.03 OrthoFinder output from all 47 species
AMTR_s00077p00095230 VSR1;1, BP80,... Vesicle trafficking.endomembrane trafficking.vacuolar... 0.03 OrthoFinder output from all 47 species
AT1G30900 VSR6, VSR3;3, BP80-3;3 VACUOLAR SORTING RECEPTOR 6 0.05 OrthoFinder output from all 47 species
AT2G14720 VSR4, VSR2;1,... vacuolar sorting receptor 4 0.03 OrthoFinder output from all 47 species
AT2G34940 VSR5, VSR3;2, BP80-3;2 VACUOLAR SORTING RECEPTOR 5 0.04 OrthoFinder output from all 47 species
AT3G52850 VSR1;1, BP80,... vacuolar sorting receptor homolog 1 0.04 OrthoFinder output from all 47 species
AT4G20110 VSR7, BP80-3;1, VSR3;1 VACUOLAR SORTING RECEPTOR 7 0.05 OrthoFinder output from all 47 species
Adi_g051957 VSR4, VSR2;1,... lytic vacuole protein sorting receptor *(VSR) & original... 0.03 OrthoFinder output from all 47 species
Adi_g082179 VSR4, VSR2;1,... lytic vacuole protein sorting receptor *(VSR) & original... 0.02 OrthoFinder output from all 47 species
Aev_g07171 VSR2;2, ATVSR3,... lytic vacuole protein sorting receptor *(VSR) & original... 0.03 OrthoFinder output from all 47 species
Aev_g17238 VSR4, VSR2;1,... lytic vacuole protein sorting receptor *(VSR) & original... 0.03 OrthoFinder output from all 47 species
Ala_g12206 VSR2;2, ATVSR3,... lytic vacuole protein sorting receptor *(VSR) & original... 0.01 OrthoFinder output from all 47 species
Als_g56634 VSR4, VSR2;1,... lytic vacuole protein sorting receptor *(VSR) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene22822.t1 VSR2;2, ATVSR3,... lytic vacuole protein sorting receptor *(VSR) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0524.g075296 VSR4, VSR2;1,... lytic vacuole protein sorting receptor *(VSR) & original... 0.03 OrthoFinder output from all 47 species
Cba_g07669 VSR4, VSR2;1,... lytic vacuole protein sorting receptor *(VSR) & original... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021168.4 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g08227 VSR2;2, ATVSR3,... lytic vacuole protein sorting receptor *(VSR) & original... 0.02 OrthoFinder output from all 47 species
Dde_g17035 VSR2;2, ATVSR3,... lytic vacuole protein sorting receptor *(VSR) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g05912 VSR4, VSR2;1,... lytic vacuole protein sorting receptor *(VSR) & original... 0.04 OrthoFinder output from all 47 species
LOC_Os03g21720.1 AtVSR2,... vacuolar sorting receptor (VSR) 0.12 OrthoFinder output from all 47 species
LOC_Os04g52190.1 VSR6, VSR3;3,... vacuolar sorting receptor (VSR) 0.03 OrthoFinder output from all 47 species
LOC_Os06g45380.1 VSR6, VSR3;3,... vacuolar sorting receptor (VSR) 0.03 OrthoFinder output from all 47 species
Len_g04782 VSR4, VSR2;1,... lytic vacuole protein sorting receptor *(VSR) & original... 0.02 OrthoFinder output from all 47 species
Len_g17548 VSR4, VSR2;1,... lytic vacuole protein sorting receptor *(VSR) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g10412 VSR4, VSR2;1,... lytic vacuole protein sorting receptor *(VSR) & original... 0.02 OrthoFinder output from all 47 species
Msp_g24105 VSR4, VSR2;1,... lytic vacuole protein sorting receptor *(VSR) & original... 0.03 OrthoFinder output from all 47 species
Ore_g12704 VSR4, VSR2;1,... lytic vacuole protein sorting receptor *(VSR) & original... 0.03 OrthoFinder output from all 47 species
Pir_g05166 VSR2;2, ATVSR3,... lytic vacuole protein sorting receptor *(VSR) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g03102 VSR2;2, ATVSR3,... lytic vacuole protein sorting receptor *(VSR) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006038 VSR4, VSR2;1,... lytic vacuole protein sorting receptor *(VSR) & original... 0.03 OrthoFinder output from all 47 species
Sam_g02553 No alias lytic vacuole protein sorting receptor *(VSR) & original... 0.02 OrthoFinder output from all 47 species
Sam_g03986 No alias lytic vacuole protein sorting receptor *(VSR) & original... 0.02 OrthoFinder output from all 47 species
Sam_g09347 No alias lytic vacuole protein sorting receptor *(VSR) & original... 0.04 OrthoFinder output from all 47 species
Sam_g29379 No alias lytic vacuole protein sorting receptor *(VSR) & original... 0.04 OrthoFinder output from all 47 species
Sam_g50923 No alias lytic vacuole protein sorting receptor *(VSR) & original... 0.02 OrthoFinder output from all 47 species
Smo440462 VSR4, VSR2;1,... Vesicle trafficking.endomembrane trafficking.vacuolar... 0.03 OrthoFinder output from all 47 species
Solyc02g081970.4.1 VSR6, VSR3;3,... vacuolar sorting receptor (VSR) 0.02 OrthoFinder output from all 47 species
Solyc10g074980.2.1 AtVSR2,... vacuolar sorting receptor (VSR) 0.04 OrthoFinder output from all 47 species
Spa_g20464 VSR2;2, ATVSR3,... lytic vacuole protein sorting receptor *(VSR) & original... 0.02 OrthoFinder output from all 47 species
Tin_g35295 VSR2;2, ATVSR3,... lytic vacuole protein sorTing receptor *(VSR) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e037729_P002 VSR6, VSR3;3,... vacuolar sorting receptor (VSR) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP HCCA
MF GO:0003997 acyl-CoA oxidase activity IEP HCCA
MF GO:0004061 arylformamidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006568 tryptophan metabolic process IEP HCCA
BP GO:0006569 tryptophan catabolic process IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006586 indolalkylamine metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006635 fatty acid beta-oxidation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009074 aromatic amino acid family catabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0019441 tryptophan catabolic process to kynurenine IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042180 cellular ketone metabolic process IEP HCCA
BP GO:0042430 indole-containing compound metabolic process IEP HCCA
BP GO:0042436 indole-containing compound catabolic process IEP HCCA
BP GO:0042537 benzene-containing compound metabolic process IEP HCCA
CC GO:0042579 microbody IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0070189 kynurenine metabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003137 PA_domain 96 162
No external refs found!