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  5. Zm00001e025196_P001

Zm00001e025196_P001 (Zm00001e025196)


Aliases : Zm00001e025196

Description : CCT7 subunit eta of CCT chaperonin folding complex


Gene families : OG0006075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e025196_P001
Cluster HCCA: Cluster_183

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00107630 evm_27.TU.AmTr_v1... Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.05 OrthoFinder output from all 47 species
AT3G11830 No alias TCP-1/cpn60 chaperonin family protein 0.05 OrthoFinder output from all 47 species
Adi_g113191 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.05 OrthoFinder output from all 47 species
Aev_g01135 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.02 OrthoFinder output from all 47 species
Ala_g16611 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.03 OrthoFinder output from all 47 species
Als_g10726 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.03 OrthoFinder output from all 47 species
Aop_g01325 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene46582.t1 Aspi01Gene46582 subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.02 OrthoFinder output from all 47 species
Azfi_s0015.g014027 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.05 OrthoFinder output from all 47 species
Azfi_s0054.g033787 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.03 OrthoFinder output from all 47 species
Cba_g11703 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.03 OrthoFinder output from all 47 species
Cba_g11704 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.02 OrthoFinder output from all 47 species
Ceric.05G016500.1 Ceric.05G016500 subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.08 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001371.8 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.04 OrthoFinder output from all 47 species
Cre01.g026550 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.05 OrthoFinder output from all 47 species
Dac_g09536 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.05 OrthoFinder output from all 47 species
Dcu_g14177 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.08 OrthoFinder output from all 47 species
Len_g04756 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.03 OrthoFinder output from all 47 species
Lfl_g17138 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.04 OrthoFinder output from all 47 species
MA_20110g0010 No alias CCT7 subunit eta of CCT chaperonin folding complex 0.09 OrthoFinder output from all 47 species
Mp7g09680.1 No alias CCT7 subunit eta of CCT chaperonin folding complex 0.06 OrthoFinder output from all 47 species
Nbi_g00986 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.04 OrthoFinder output from all 47 species
Pp3c15_8230V3.1 Pp3c15_8230 TCP-1/cpn60 chaperonin family protein 0.01 OrthoFinder output from all 47 species
Ppi_g06900 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010398 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.04 OrthoFinder output from all 47 species
Sam_g18786 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.04 OrthoFinder output from all 47 species
Sam_g27520 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.02 OrthoFinder output from all 47 species
Smo168086 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.08 OrthoFinder output from all 47 species
Solyc06g065520.3.1 Solyc06g065520 CCT7 subunit eta of CCT chaperonin folding complex 0.07 OrthoFinder output from all 47 species
Spa_g06049 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.07 OrthoFinder output from all 47 species
Tin_g01076 No alias subunit eta *(CCT7) of CCT chaperonin folding complex &... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003883 CTP synthase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004826 phenylalanine-tRNA ligase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006220 pyrimidine nucleotide metabolic process IEP HCCA
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 37 526
No external refs found!