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  5. Zm00001e023452_P001

Zm00001e023452_P001 (SPPA1, SPPA, Zm00001e023452)


Aliases : SPPA1, SPPA, Zm00001e023452

Description : plastidial protease (SppA)


Gene families : OG0003669 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003669_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e023452_P001
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00260630 SPPA1, SPPA,... Protein degradation.peptidase families.serine-type... 0.06 OrthoFinder output from all 47 species
Aev_g10536 SPPA1, SPPA plastidial protease *(SppA) & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g17029 SPPA1, SPPA plastidial protease *(SppA) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g18046 SPPA1, SPPA plastidial protease *(SppA) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g03551 SPPA1, SPPA plastidial protease *(SppA) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08975 SPPA1, SPPA plastidial protease *(SppA) & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene63154.t1 SPPA1, SPPA,... plastidial protease *(SppA) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0230.g059188 SPPA1, SPPA plastidial protease *(SppA) & original description: CDS=185-2362 0.06 OrthoFinder output from all 47 species
Cba_g01199 SPPA1, SPPA plastidial protease *(SppA) & original description: none 0.08 OrthoFinder output from all 47 species
Ceric.37G010400.1 SPPA1, SPPA,... plastidial protease *(SppA) & original description:... 0.08 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000663.54 SPPA1, SPPA Protein degradation.peptidase families.serine-type... 0.05 OrthoFinder output from all 47 species
Cre10.g444550 SPPA1, SPPA Protein degradation.peptidase families.serine-type... 0.08 OrthoFinder output from all 47 species
Dcu_g07614 SPPA1, SPPA plastidial protease *(SppA) & original description: none 0.1 OrthoFinder output from all 47 species
Dde_g10356 SPPA1, SPPA plastidial protease *(SppA) & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g03951 SPPA1, SPPA plastidial protease *(SppA) & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01008179001 SPPA1, SPPA Protein degradation.peptidase families.serine-type... 0.04 OrthoFinder output from all 47 species
Gb_05224 SPPA1, SPPA plastidial protease (SppA) 0.1 OrthoFinder output from all 47 species
LOC_Os02g49570.1 SPPA1, SPPA,... plastidial protease (SppA) 0.09 OrthoFinder output from all 47 species
Len_g23586 SPPA1, SPPA plastidial protease *(SppA) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01983 SPPA1, SPPA plastidial protease *(SppA) & original description: none 0.1 OrthoFinder output from all 47 species
MA_10431775g0010 SPPA1, SPPA Serine protease SPPA, chloroplastic OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
MA_179977g0010 SPPA1, SPPA Serine protease SPPA, chloroplastic OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Mp8g11270.1 SPPA1, SPPA plastidial protease (SppA) 0.04 OrthoFinder output from all 47 species
Msp_g26653 SPPA1, SPPA plastidial protease *(SppA) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03780 SPPA1, SPPA plastidial protease *(SppA) & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g06891 SPPA1, SPPA plastidial protease *(SppA) & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g10891 SPPA1, SPPA plastidial protease *(SppA) & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g06529 SPPA1, SPPA plastidial protease *(SppA) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31090 SPPA1, SPPA plastidial protease *(SppA) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0977.g027894 SPPA1, SPPA plastidial protease *(SppA) & original description: CDS=2-775 0.02 OrthoFinder output from all 47 species
Sam_g19405 No alias plastidial protease *(SppA) & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g27118 No alias plastidial protease *(SppA) & original description: none 0.03 OrthoFinder output from all 47 species
Smo173134 SPPA1, SPPA Protein degradation.peptidase families.serine-type... 0.05 OrthoFinder output from all 47 species
Spa_g12494 SPPA1, SPPA plastidial protease *(SppA) & original description: none 0.09 OrthoFinder output from all 47 species
Tin_g11091 SPPA1, SPPA plastidial protease *(SppA) & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008233 peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004813 alanine-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006419 alanyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002142 Peptidase_S49 439 590
IPR002142 Peptidase_S49 188 339
No external refs found!