1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e021705_P002

Zm00001e021705_P002 (VPS45, ATVPS45, Zm00001e021705)


Aliases : VPS45, ATVPS45, Zm00001e021705

Description : VPS45 vesicle trafficking regulator protein


Gene families : OG0005423 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005423_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e021705_P002

Target Alias Description ECC score Gene Family Method Actions
Als_g07759 VPS45, ATVPS45 regulatory protein *(VPS45) of vesicle trafficking &... 0.03 OrthoFinder output from all 47 species
Aop_g03807 VPS45, ATVPS45 regulatory protein *(VPS45) of vesicle trafficking &... 0.02 OrthoFinder output from all 47 species
Cba_g02007 VPS45, ATVPS45 regulatory protein *(VPS45) of vesicle trafficking &... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020961.111 VPS45, ATVPS45 Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from all 47 species
Cre07.g333950 VPS45, ATVPS45 Vesicle trafficking.SNARE target membrane recognition... 0.01 OrthoFinder output from all 47 species
Dcu_g13973 VPS45, ATVPS45 regulatory protein *(VPS45) of vesicle trafficking &... 0.03 OrthoFinder output from all 47 species
Ehy_g01397 VPS45, ATVPS45 regulatory protein *(VPS45) of vesicle trafficking &... 0.02 OrthoFinder output from all 47 species
GSVIVT01010038001 VPS45, ATVPS45 Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from all 47 species
MA_10435658g0010 VPS45, ATVPS45 Vacuolar protein sorting-associated protein 45 homolog... 0.03 OrthoFinder output from all 47 species
MA_9252668g0010 VPS45, ATVPS45 VPS45 vesicle trafficking regulator protein 0.02 OrthoFinder output from all 47 species
Pir_g14503 VPS45, ATVPS45 regulatory protein *(VPS45) of vesicle trafficking &... 0.02 OrthoFinder output from all 47 species
Smo170447 VPS45, ATVPS45 Vesicle trafficking.SNARE target membrane recognition... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006904 vesicle docking involved in exocytosis IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006505 GPI anchor metabolic process IEP HCCA
BP GO:0006506 GPI anchor biosynthetic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001619 Sec1-like 22 553
No external refs found!