Zm00001e020499_P001 (ftsh4, Zm00001e020499)

Aliases : ftsh4, Zm00001e020499

Description : component FtsH4|11 of FtsH mitochondrial protease complexes

Gene families : OG0001340 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001340_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e020499_P001

Target	Alias	Description	ECC score	Gene Family Method
Adi_g025495	FTSH11	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.02	OrthoFinder output from all 47 species
Ala_g28204	ftsh4	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene70934.t1	ftsh4, Aspi01Gene70934	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.04	OrthoFinder output from all 47 species
Ceric.25G029600.1	ftsh4, Ceric.25G029600	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.03	OrthoFinder output from all 47 species
Dac_g20599	ftsh4	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.03	OrthoFinder output from all 47 species
GSVIVT01035393001	ftsh4	Protein degradation.peptidase families.metallopeptidase...	0.03	OrthoFinder output from all 47 species
Lfl_g07062	ftsh4	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.02	OrthoFinder output from all 47 species
Lfl_g10762	ftsh4	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.02	OrthoFinder output from all 47 species
Mp2g03880.1	ftsh4	component FtsH4\|11 of FtsH mitochondrial protease complexes	0.03	OrthoFinder output from all 47 species
Msp_g10134	ftsh4	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.02	OrthoFinder output from all 47 species
Ore_g19291	ftsh4	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.02	OrthoFinder output from all 47 species
Ore_g40942	FTSH11	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.02	OrthoFinder output from all 47 species
Pir_g02556	ftsh4	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.02	OrthoFinder output from all 47 species
Sam_g29548	No alias	ATP-dependent metalloprotease *(FtsH4/11) & original...	0.02	OrthoFinder output from all 47 species
Smo172575	ftsh4	Protein degradation.peptidase families.metallopeptidase...	0.03	OrthoFinder output from all 47 species
Solyc08g063050.3.1	ftsh4, Solyc08g063050	component FtsH4\|11 of FtsH mitochondrial protease complexes	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004222	metalloendopeptidase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006508	proteolysis	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008237	metallopeptidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	259	388
IPR041569	AAA_lid_3	411	454
IPR000642	Peptidase_M41	470	650

External Links

No external refs found!

Zm00001e020499_P001 (ftsh4, Zm00001e020499)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation