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  5. Zm00001e017228_P001

Zm00001e017228_P001 (Zm00001e017228)


Aliases : Zm00001e017228

Description : CCT2 subunit beta of CCT chaperonin folding complex


Gene families : OG0005353 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005353_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e017228_P001
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00149p00026500 evm_27.TU.AmTr_v1... Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.06 OrthoFinder output from all 47 species
AT5G20890 No alias TCP-1/cpn60 chaperonin family protein 0.13 OrthoFinder output from all 47 species
Adi_g092819 No alias subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.02 OrthoFinder output from all 47 species
Aob_g06619 No alias subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.03 OrthoFinder output from all 47 species
Azfi_s0251.g060285 No alias subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.04 OrthoFinder output from all 47 species
Ceric.02G085300.1 Ceric.02G085300 subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.08 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020903.30 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.03 OrthoFinder output from all 47 species
Cre09.g416750 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.06 OrthoFinder output from all 47 species
Dac_g00849 No alias subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.03 OrthoFinder output from all 47 species
Dcu_g14728 No alias subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.07 OrthoFinder output from all 47 species
Ehy_g02581 No alias subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.05 OrthoFinder output from all 47 species
GSVIVT01008708001 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.13 OrthoFinder output from all 47 species
LOC_Os03g42220.1 LOC_Os03g42220 CCT2 subunit beta of CCT chaperonin folding complex 0.16 OrthoFinder output from all 47 species
LOC_Os05g48290.3 LOC_Os05g48290 CCT2 subunit beta of CCT chaperonin folding complex 0.08 OrthoFinder output from all 47 species
Len_g15421 No alias subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.02 OrthoFinder output from all 47 species
MA_10434959g0010 No alias CCT2 subunit beta of CCT chaperonin folding complex 0.06 OrthoFinder output from all 47 species
Mp5g16030.1 No alias CCT2 subunit beta of CCT chaperonin folding complex 0.07 OrthoFinder output from all 47 species
Nbi_g03110 No alias subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.03 OrthoFinder output from all 47 species
Ore_g15486 No alias subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.06 OrthoFinder output from all 47 species
Pp3c6_15940V3.1 Pp3c6_15940 TCP-1/cpn60 chaperonin family protein 0.02 OrthoFinder output from all 47 species
Ppi_g31150 No alias subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.02 OrthoFinder output from all 47 species
Sam_g12467 No alias subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.06 OrthoFinder output from all 47 species
Smo171093 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.05 OrthoFinder output from all 47 species
Solyc11g069000.2.1 Solyc11g069000 CCT2 subunit beta of CCT chaperonin folding complex 0.09 OrthoFinder output from all 47 species
Spa_g11138 No alias subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.06 OrthoFinder output from all 47 species
Tin_g02689 No alias subunit beta *(CCT2) of CCT chaperonin folding complex &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004826 phenylalanine-tRNA ligase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 28 515
No external refs found!