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  5. Zm00001e016059_P003

Zm00001e016059_P003 (Zm00001e016059)


Aliases : Zm00001e016059

Description : no hits & (original description: none)


Gene families : OG0004428 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004428_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e016059_P003
Cluster HCCA: Cluster_183

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00264760 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT2G34357 No alias ARM repeat superfamily protein 0.21 OrthoFinder output from all 47 species
Adi_g021099 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13675 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07501 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g05321 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011517 No alias not classified & original description: CDS=97-4008 0.03 OrthoFinder output from all 47 species
Cba_g11874 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.18G047800.1 Ceric.18G047800 not classified & original description: pacid=50622555... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020554.42 No alias No description available 0.09 OrthoFinder output from all 47 species
Cre19.g751197 No alias No description available 0.11 OrthoFinder output from all 47 species
Dcu_g11589 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g08172 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05092 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01023097001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_09813 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Gb_23183 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g54110.1 LOC_Os02g54110 no hits & (original description: none) 0.22 OrthoFinder output from all 47 species
Len_g20663 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g07438 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10433024g0020 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_242029g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_55053g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Mp1g25050.1 No alias no hits & (original description: none) 0.14 OrthoFinder output from all 47 species
Msp_g16189 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g36824 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g20752 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c2_3190V3.1 Pp3c2_3190 ARM repeat superfamily protein 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g012003 No alias not classified & original description: CDS=123-3902 0.02 OrthoFinder output from all 47 species
Sam_g16187 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo78845 No alias No description available 0.06 OrthoFinder output from all 47 species
Solyc07g042380.4.1 Solyc07g042380 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
Tin_g09496 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005049 nuclear export signal receptor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR012978 RRP12-like_dom 411 609
No external refs found!