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  5. Zm00001e002454_P001

Zm00001e002454_P001 (Zm00001e002454)


Aliases : Zm00001e002454

Description : Probable plastid-lipid-associated protein 3, chloroplastic OS=Oryza sativa subsp. japonica (sp|q7xbw5|pap3_orysj : 341.0)


Gene families : OG0002240 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002240_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e002454_P001
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00085290 evm_27.TU.AmTr_v1... Plastid lipid-associated protein 3, chloroplastic... 0.05 OrthoFinder output from all 47 species
Adi_g113978 No alias Fibrillin plastoglobule core protein *(FBN1/2) &... 0.02 OrthoFinder output from all 47 species
Aev_g10976 No alias Fibrillin plastoglobule core protein *(FBN1/2) &... 0.07 OrthoFinder output from all 47 species
Aev_g39447 No alias Fibrillin plastoglobule core protein *(FBN1/2) &... 0.03 OrthoFinder output from all 47 species
Als_g02332 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.06 OrthoFinder output from all 47 species
Aob_g19138 No alias Fibrillin plastoglobule core protein *(FBN1/2) &... 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000159 No alias Fibrillin plastoglobule core protein *(FBN1/2) &... 0.06 OrthoFinder output from all 47 species
Cba_g01687 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020943.18 No alias Plastoglobulin-1, chloroplastic OS=Pisum sativum 0.02 OrthoFinder output from all 47 species
Dac_g17027 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.03 OrthoFinder output from all 47 species
Dde_g12841 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.04 OrthoFinder output from all 47 species
Ehy_g24089 No alias Fibrillin plastoglobule core protein *(FBN8) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01013072001 No alias Probable plastid-lipid-associated protein 3,... 0.03 OrthoFinder output from all 47 species
LOC_Os09g04790.1 LOC_Os09g04790 Probable plastid-lipid-associated protein 2,... 0.05 OrthoFinder output from all 47 species
LOC_Os10g42500.1 LOC_Os10g42500 Probable plastid-lipid-associated protein 3,... 0.05 OrthoFinder output from all 47 species
MA_153977g0010 No alias Plastid-lipid-associated protein, chloroplastic... 0.08 OrthoFinder output from all 47 species
MA_28715g0010 No alias Light-induced protein, chloroplastic OS=Solanum... 0.03 OrthoFinder output from all 47 species
Ore_g45290 No alias Fibrillin plastoglobule core protein *(FBN1/2) &... 0.05 OrthoFinder output from all 47 species
Pir_g18705 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.03 OrthoFinder output from all 47 species
Ppi_g09162 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.07 OrthoFinder output from all 47 species
Sam_g29401 No alias Fibrillin plastoglobule core protein *(FBN1/2) &... 0.04 OrthoFinder output from all 47 species
Smo163532 No alias Plastid lipid-associated protein 2, chloroplastic... 0.02 OrthoFinder output from all 47 species
Spa_g08959 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.03 OrthoFinder output from all 47 species
Spa_g25316 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.03 OrthoFinder output from all 47 species
Tin_g21553 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006843 PAP/fibrillin_dom 156 372
No external refs found!