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  5. Zm00001e001127_P004

Zm00001e001127_P004 (Zm00001e001127)


Aliases : Zm00001e001127

Description : IMB4 nucleocytoplasmic import karyopherin


Gene families : OG0005260 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005260_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e001127_P004

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00059110 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.05 OrthoFinder output from all 47 species
AT4G27640 No alias ARM repeat superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g008189 No alias nucleocytoplasmic import karyopherin *(IMB4) & original... 0.04 OrthoFinder output from all 47 species
Ala_g03927 No alias nucleocytoplasmic import karyopherin *(IMB4) & original... 0.06 OrthoFinder output from all 47 species
Als_g05135 No alias nucleocytoplasmic import karyopherin *(IMB4) & original... 0.02 OrthoFinder output from all 47 species
Aop_g07002 No alias nucleocytoplasmic import karyopherin *(IMB4) & original... 0.02 OrthoFinder output from all 47 species
Ceric.27G000100.1 Ceric.27G000100 nucleocytoplasmic import karyopherin *(IMB4) & original... 0.08 OrthoFinder output from all 47 species
Dac_g14126 No alias nucleocytoplasmic import karyopherin *(IMB4) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g04972 No alias nucleocytoplasmic import karyopherin *(IMB4) & original... 0.1 OrthoFinder output from all 47 species
GSVIVT01022879001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.13 OrthoFinder output from all 47 species
LOC_Os03g15540.1 LOC_Os03g15540 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g14349 No alias nucleocytoplasmic import karyopherin *(IMB4) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g10041 No alias nucleocytoplasmic import karyopherin *(IMB4) & original... 0.02 OrthoFinder output from all 47 species
MA_10061366g0010 No alias IMB4 nucleocytoplasmic import karyopherin 0.11 OrthoFinder output from all 47 species
MA_10435245g0010 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Mp1g01470.1 No alias IMB4 nucleocytoplasmic import karyopherin 0.07 OrthoFinder output from all 47 species
Msp_g13617 No alias nucleocytoplasmic import karyopherin *(IMB4) & original... 0.04 OrthoFinder output from all 47 species
Nbi_g13492 No alias nucleocytoplasmic import karyopherin *(IMB4) & original... 0.02 OrthoFinder output from all 47 species
Solyc01g104070.3.1 Solyc01g104070 IMB4 nucleocytoplasmic import karyopherin 0.02 OrthoFinder output from all 47 species
Tin_g15675 No alias nucleocytoplasmic import karyopherin *(IMB4) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004832 valine-tRNA ligase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006438 valyl-tRNA aminoacylation IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:0140352 export from cell IEP HCCA
InterPro domains Description Start Stop
IPR001494 Importin-beta_N 23 87
IPR000357 HEAT 160 190
No external refs found!