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  5. Gb_36066

Gb_36066 (ATSCO1/CPEF-G, SCO1, ATSCO1)


Aliases : ATSCO1/CPEF-G, SCO1, ATSCO1

Description : EF-G translation elongation factor


Gene families : OG0002078 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002078_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_36066
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00149p00031690 ATSCO1/CPEF-G,... Protein biosynthesis.organelle translation... 0.07 OrthoFinder output from all 47 species
AT1G62750 ATSCO1/CPEF-G,... Translation elongation factor EFG/EF2 protein 0.15 OrthoFinder output from all 47 species
Adi_g024951 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.05 OrthoFinder output from all 47 species
Adi_g087916 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.04 OrthoFinder output from all 47 species
Ala_g02375 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.06 OrthoFinder output from all 47 species
Als_g15105 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.06 OrthoFinder output from all 47 species
Aob_g05315 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.04 OrthoFinder output from all 47 species
Aop_g06164 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.12 OrthoFinder output from all 47 species
Aspi01Gene31691.t1 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.06 OrthoFinder output from all 47 species
Azfi_s0027.g023510 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.06 OrthoFinder output from all 47 species
Cba_g01251 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.07 OrthoFinder output from all 47 species
Ceric.04G106300.1 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.14 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000144.55 No alias Protein biosynthesis.organelle translation... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000144.56 No alias Elongation factor G-1, mitochondrial OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre02.g076250 ATSCO1/CPEF-G,... Protein biosynthesis.organelle translation... 0.07 OrthoFinder output from all 47 species
Cre11.g467553 No alias Elongation factor G, mitochondrial OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
Dac_g00996 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.05 OrthoFinder output from all 47 species
Dcu_g08930 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.05 OrthoFinder output from all 47 species
Ehy_g01583 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.06 OrthoFinder output from all 47 species
GSVIVT01006035001 ATSCO1/CPEF-G,... Protein biosynthesis.organelle translation... 0.12 OrthoFinder output from all 47 species
LOC_Os04g45490.1 ATSCO1/CPEF-G,... EF-G translation elongation factor 0.06 OrthoFinder output from all 47 species
Len_g12465 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.05 OrthoFinder output from all 47 species
Len_g18043 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g02343 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.04 OrthoFinder output from all 47 species
Mp1g01140.1 No alias EF-G translation elongation factor 0.02 OrthoFinder output from all 47 species
Mp7g06620.1 ATSCO1/CPEF-G,... EF-G translation elongation factor 0.03 OrthoFinder output from all 47 species
Msp_g07900 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.05 OrthoFinder output from all 47 species
Nbi_g06861 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.06 OrthoFinder output from all 47 species
Ore_g06596 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.07 OrthoFinder output from all 47 species
Ppi_g15053 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002734 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.04 OrthoFinder output from all 47 species
Sam_g17251 No alias translation elongation factor *(EF-G) & original... 0.02 OrthoFinder output from all 47 species
Smo143627 ATSCO1/CPEF-G,... Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
Solyc08g079180.3.1 ATSCO1/CPEF-G,... EF-G translation elongation factor 0.02 OrthoFinder output from all 47 species
Spa_g05896 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.03 OrthoFinder output from all 47 species
Tin_g01189 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.06 OrthoFinder output from all 47 species
Zm00001e007402_P001 ATSCO1/CPEF-G,... EF-G translation elongation factor 0.05 OrthoFinder output from all 47 species
Zm00001e041325_P001 ATSCO1/CPEF-G,... EF-G translation elongation factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004096 catalase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004618 phosphoglycerate kinase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004813 alanine-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006419 alanyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006536 glutamate metabolic process IEP HCCA
BP GO:0006537 glutamate biosynthetic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0015930 glutamate synthase activity IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0017038 protein import IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0043650 dicarboxylic acid biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR041095 EFG_II 493 566
IPR005517 Transl_elong_EFG/EF2_IV 568 686
IPR000640 EFG_V-like 689 776
IPR004161 EFTu-like_2 413 480
IPR000795 T_Tr_GTP-bd_dom 99 370
No external refs found!