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  5. Gb_19640

Gb_19640


Description : component TASH3 of TPLATE AP-2 co-adaptor complex


Gene families : OG0004200 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004200_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_19640
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00228240 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 OrthoFinder output from all 47 species
AT2G07360 No alias SH3 domain-containing protein 0.05 OrthoFinder output from all 47 species
Adi_g012263 No alias component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.04 OrthoFinder output from all 47 species
Aev_g03405 No alias component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.03 OrthoFinder output from all 47 species
Ala_g04411 No alias component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.06 OrthoFinder output from all 47 species
Als_g06409 No alias component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.06 OrthoFinder output from all 47 species
Aob_g04488 No alias component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene43034.t1 Aspi01Gene43034 component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.04 OrthoFinder output from all 47 species
Cba_g01323 No alias component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.04 OrthoFinder output from all 47 species
Ceric.19G017700.1 Ceric.19G017700 component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.05 OrthoFinder output from all 47 species
Cre08.g384864 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g10947 No alias component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.07 OrthoFinder output from all 47 species
GSVIVT01022289001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.08 OrthoFinder output from all 47 species
LOC_Os03g15900.2 LOC_Os03g15900 component TASH3 of TPLATE AP-2 co-adaptor complex 0.04 OrthoFinder output from all 47 species
Len_g00758 No alias component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.05 OrthoFinder output from all 47 species
Lfl_g10824 No alias component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.06 OrthoFinder output from all 47 species
MA_10436368g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10437142g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp2g09190.1 No alias component TASH3 of TPLATE AP-2 co-adaptor complex 0.04 OrthoFinder output from all 47 species
Nbi_g02456 No alias component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.03 OrthoFinder output from all 47 species
Ore_g20423 No alias component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.05 OrthoFinder output from all 47 species
Pir_g19886 No alias component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.04 OrthoFinder output from all 47 species
Solyc05g025750.3.1 Solyc05g025750 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Spa_g09386 No alias component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.02 OrthoFinder output from all 47 species
Tin_g02184 No alias component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.02 OrthoFinder output from all 47 species
Zm00001e001169_P001 Zm00001e001169 component TASH3 of TPLATE AP-2 co-adaptor complex 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001452 SH3_domain 1169 1218
No external refs found!