Gb_11357 (ERMO2, SEC24A)

Aliases : ERMO2, SEC24A

Description : component Sec24 of Sec23/24 cargo adaptor subcomplex

Gene families : OG0002578 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002578_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_11357
Cluster	HCCA: Cluster_41

Target	Alias	Description	ECC score	Gene Family Method
AT3G07100	ERMO2, SEC24A	Sec23/Sec24 protein transport family protein	0.07	OrthoFinder output from all 47 species
Adi_g014897	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g036391	ERMO2, SEC24A	component *(Sec24) of Sec23/24 cargo adaptor subcomplex...	0.03	OrthoFinder output from all 47 species
Adi_g104712	ERMO2, SEC24A	component *(Sec24) of Sec23/24 cargo adaptor subcomplex...	0.04	OrthoFinder output from all 47 species
Ala_g07463	ERMO2, SEC24A	component *(Sec24) of Sec23/24 cargo adaptor subcomplex...	0.03	OrthoFinder output from all 47 species
Als_g15715	ERMO2, SEC24A	component *(Sec24) of Sec23/24 cargo adaptor subcomplex...	0.05	OrthoFinder output from all 47 species
Als_g31835	ERMO2, SEC24A	component *(Sec24) of Sec23/24 cargo adaptor subcomplex...	0.03	OrthoFinder output from all 47 species
Aob_g16669	ERMO2, SEC24A	component *(Sec24) of Sec23/24 cargo adaptor subcomplex...	0.03	OrthoFinder output from all 47 species
Aop_g09723	ERMO2, SEC24A	component *(Sec24) of Sec23/24 cargo adaptor subcomplex...	0.03	OrthoFinder output from all 47 species
Aspi01Gene63097.t1	ERMO2, SEC24A,...	component *(Sec24) of Sec23/24 cargo adaptor subcomplex...	0.06	OrthoFinder output from all 47 species
Azfi_s0022.g015967	ERMO2, SEC24A	component *(Sec24) of Sec23/24 cargo adaptor subcomplex...	0.02	OrthoFinder output from all 47 species
Ceric.37G019900.1	ERMO2, SEC24A,...	component *(Sec24) of Sec23/24 cargo adaptor subcomplex...	0.04	OrthoFinder output from all 47 species
Cre02.g091150	ERMO2, SEC24A	Vesicle trafficking.Coat protein II (COPII) coatomer...	0.03	OrthoFinder output from all 47 species
Dcu_g06981	ERMO2, SEC24A	component *(Sec24) of Sec23/24 cargo adaptor subcomplex...	0.09	OrthoFinder output from all 47 species
Dcu_g09947	ERMO2, SEC24A	component *(Sec24) of Sec23/24 cargo adaptor subcomplex...	0.06	OrthoFinder output from all 47 species
Dcu_g41600	ERMO2, SEC24A	component *(Sec24) of Sec23/24 cargo adaptor subcomplex...	0.06	OrthoFinder output from all 47 species
Dde_g10689	ERMO2, SEC24A	component *(Sec24) of Sec23/24 cargo adaptor subcomplex...	0.03	OrthoFinder output from all 47 species
GSVIVT01014261001	ERMO2, SEC24A	Vesicle trafficking.Coat protein II (COPII) coatomer...	0.09	OrthoFinder output from all 47 species
LOC_Os04g04020.1	ERMO2, SEC24A,...	component Sec24 of Sec23/24 cargo adaptor subcomplex	0.06	OrthoFinder output from all 47 species
Lfl_g03448	ERMO2, SEC24A	component *(Sec24) of Sec23/24 cargo adaptor subcomplex...	0.05	OrthoFinder output from all 47 species
MA_10430919g0010	ERMO2, SEC24A	component Sec24 of Sec23/24 cargo adaptor subcomplex	0.04	OrthoFinder output from all 47 species
MA_10434705g0010	ERMO2, SEC24A	component Sec24 of Sec23/24 cargo adaptor subcomplex	0.05	OrthoFinder output from all 47 species
Mp7g13560.1	ERMO2, SEC24A	component Sec24 of Sec23/24 cargo adaptor subcomplex	0.06	OrthoFinder output from all 47 species
Msp_g47860	ERMO2, SEC24A	component *(Sec24) of Sec23/24 cargo adaptor subcomplex...	0.02	OrthoFinder output from all 47 species
Ore_g05015	ERMO2, SEC24A	component *(Sec24) of Sec23/24 cargo adaptor subcomplex...	0.03	OrthoFinder output from all 47 species
Sam_g16600	No alias	component *(Sec24) of Sec23/24 cargo adaptor subcomplex...	0.02	OrthoFinder output from all 47 species
Sam_g18078	No alias	component *(Sec24) of Sec23/24 cargo adaptor subcomplex...	0.02	OrthoFinder output from all 47 species
Solyc02g082220.3.1	ERMO2, SEC24A,...	component Sec24 of Sec23/24 cargo adaptor subcomplex	0.05	OrthoFinder output from all 47 species
Tin_g40335	ERMO2, SEC24A	component *(Sec24) of Sec23/24 cargo adaptor subcomplex...	0.04	OrthoFinder output from all 47 species
Zm00001e008766_P001	ERMO2, SEC24A,...	component Sec24 of Sec23/24 cargo adaptor subcomplex	0.08	OrthoFinder output from all 47 species
Zm00001e040573_P001	ERMO2, SEC24A,...	component Sec24 of Sec23/24 cargo adaptor subcomplex	0.09	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
CC	GO:0030117	membrane coat	None	Extended
CC	GO:0030120	vesicle coat	None	Extended
CC	GO:0030127	COPII vesicle coat	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0048193	Golgi vesicle transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	IEP	HCCA
BP	GO:0000956	nuclear-transcribed mRNA catabolic process	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0004386	helicase activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006260	DNA replication	IEP	HCCA
BP	GO:0006401	RNA catabolic process	IEP	HCCA
BP	GO:0006402	mRNA catabolic process	IEP	HCCA
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0009892	negative regulation of metabolic process	IEP	HCCA
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0010629	negative regulation of gene expression	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
BP	GO:0016197	endosomal transport	IEP	HCCA
BP	GO:0016482	cytosolic transport	IEP	HCCA
BP	GO:0019439	aromatic compound catabolic process	IEP	HCCA
MF	GO:0019899	enzyme binding	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
CC	GO:0030119	AP-type membrane coat adaptor complex	IEP	HCCA
CC	GO:0030126	COPI vesicle coat	IEP	HCCA
CC	GO:0030131	clathrin adaptor complex	IEP	HCCA
MF	GO:0031625	ubiquitin protein ligase binding	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	HCCA
BP	GO:0042147	retrograde transport, endosome to Golgi	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	HCCA
MF	GO:0044389	ubiquitin-like protein ligase binding	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0046700	heterocycle catabolic process	IEP	HCCA
BP	GO:0048519	negative regulation of biological process	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
BP	GO:1901361	organic cyclic compound catabolic process	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006896	Sec23/24_trunk_dom	466	702
IPR012990	Sec23_24_beta_S	708	792
IPR006895	Znf_Sec23_Sec24	391	429
IPR006900	Sec23/24_helical_dom	803	906

External Links

No external refs found!

Gb_11357 (ERMO2, SEC24A)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation