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  5. Gb_04525

Gb_04525


Description : protease (SPF)


Gene families : OG0001045 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001045_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_04525

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00238470 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.03 OrthoFinder output from all 47 species
Adi_g008933 No alias protease *(SPF) & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001234.8 OTS2, ULP1C Probable ubiquitin-like-specific protease 2A... 0.02 OrthoFinder output from all 47 species
Dac_g11324 OTS2, ULP1C protease *(OTS) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os05g11770.1 LOC_Os05g11770 protease (SPF) 0.05 OrthoFinder output from all 47 species
Mp2g26300.1 No alias protease (SPF). protease (OTS) 0.03 OrthoFinder output from all 47 species
Nbi_g02477 No alias protease *(SPF) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g35911 No alias protease *(SPF) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16073 No alias protease *(SPF) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13848 No alias protease *(SPF) & original description: none 0.02 OrthoFinder output from all 47 species
Smo404271 No alias Protein degradation.peptide... 0.03 OrthoFinder output from all 47 species
Spa_g55241 OTS2, ULP1C protease *(OTS) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004609 phosphatidylserine decarboxylase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004819 glutamine-tRNA ligase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006425 glutaminyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 398 598
No external refs found!