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  5. Cpa|evm.model.tig00021621.13

Cpa|evm.model.tig00021621.13


Description : Cell cycle.mitosis and meiosis.chromosome segregation.kinetochore proteins.NDC80 outer kinetochore complex.NDC80 component


Gene families : OG0005714 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005714_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021621.13
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AT3G54630 No alias CONTAINS InterPro DOMAIN/s: Kinetochore protein Ndc80... 0.08 OrthoFinder output from all 47 species
Ala_g33371 No alias component *(NDC80) of NDC80 outer kinetochore complex &... 0.01 OrthoFinder output from all 47 species
Als_g05052 No alias component *(NDC80) of NDC80 outer kinetochore complex &... 0.03 OrthoFinder output from all 47 species
Aop_g08964 No alias component *(NDC80) of NDC80 outer kinetochore complex &... 0.08 OrthoFinder output from all 47 species
Azfi_s0004.g008544 No alias component *(NDC80) of NDC80 outer kinetochore complex &... 0.04 OrthoFinder output from all 47 species
Ceric.39G004100.1 Ceric.39G004100 component *(NDC80) of NDC80 outer kinetochore complex &... 0.03 OrthoFinder output from all 47 species
Cre02.g098300 No alias Cell cycle.mitosis and meiosis.chromosome... 0.05 OrthoFinder output from all 47 species
Dcu_g10017 No alias component *(NDC80) of NDC80 outer kinetochore complex &... 0.06 OrthoFinder output from all 47 species
GSVIVT01023023001 No alias Cell cycle.mitosis and meiosis.chromosome... 0.01 OrthoFinder output from all 47 species
Gb_08872 No alias component NDC80 of NDC80 outer kinetochore complex 0.09 OrthoFinder output from all 47 species
LOC_Os08g36490.1 LOC_Os08g36490 component NDC80 of NDC80 outer kinetochore complex 0.01 OrthoFinder output from all 47 species
MA_10432519g0010 No alias component NDC80 of NDC80 outer kinetochore complex 0.01 OrthoFinder output from all 47 species
MA_180359g0010 No alias component NDC80 of NDC80 outer kinetochore complex 0.01 OrthoFinder output from all 47 species
Mp2g14660.1 No alias component NDC80 of NDC80 outer kinetochore complex 0.05 OrthoFinder output from all 47 species
Msp_g07559 No alias component *(NDC80) of NDC80 outer kinetochore complex &... 0.09 OrthoFinder output from all 47 species
Nbi_g11443 No alias component *(NDC80) of NDC80 outer kinetochore complex &... 0.08 OrthoFinder output from all 47 species
Ppi_g12827 No alias component *(NDC80) of NDC80 outer kinetochore complex &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0028.g009856 No alias component *(NDC80) of NDC80 outer kinetochore complex &... 0.02 OrthoFinder output from all 47 species
Solyc01g104520.3.1 Solyc01g104520 component NDC80 of NDC80 outer kinetochore complex 0.04 OrthoFinder output from all 47 species
Solyc01g104570.4.1 Solyc01g104570 component NDC80 of NDC80 outer kinetochore complex 0.02 OrthoFinder output from all 47 species
Zm00001e003996_P001 Zm00001e003996 component NDC80 of NDC80 outer kinetochore complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005694 chromosome IEP HCCA
CC GO:0005815 microtubule organizing center IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034453 microtubule anchoring IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR005550 Kinetochore_Ndc80 102 180
No external refs found!