Cpa|evm.model.tig00021108.19 (XIF, ATMYO5, ATXIF)

Aliases : XIF, ATMYO5, ATXIF

Description : Myosin-7 OS=Arabidopsis thaliana

Gene families : OG0000203 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000203_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00021108.19

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00039p00219460	XI-8, XI-B, XIB, ATXIB	Cytoskeleton.microfilament network.myosin...	0.01	OrthoFinder output from all 47 species
AT4G33200	XI-15, ATXI-I, XI-I	myosin, putative	0.01	OrthoFinder output from all 47 species
Adi_g055864	ATXIE, XIE	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Adi_g104758	ATVIIIA, VIIIA	class VIII myosin microfilament-based motor protein &...	0.02	OrthoFinder output from all 47 species
Aob_g19963	ATXIK, XI-17, XIK	class XI myosin microfilament-based motor protein &...	0.01	OrthoFinder output from all 47 species
Aspi01Gene03542.t1	XIC, ATXIC,...	class XI myosin microfilament-based motor protein &...	0.02	OrthoFinder output from all 47 species
Azfi_s0027.g023600	ATVIIIA, VIIIA	not classified & original description: CDS=1-2967	0.02	OrthoFinder output from all 47 species
Cba_g07782	ATXIK, XI-17, XIK	class XI myosin microfilament-based motor protein &...	0.02	OrthoFinder output from all 47 species
Ceric.21G040400.1	ATVIIIA, VIIIA,...	class VIII myosin microfilament-based motor protein &...	0.02	OrthoFinder output from all 47 species
Cre03.g197800	ATXIK, XI-17, XIK	Myosin-11 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
Dac_g15523	ATVIIIA, VIIIA	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g37414	ATXIK, XI-17, XIK	class XI myosin microfilament-based motor protein &...	0.01	OrthoFinder output from all 47 species
Ehy_g09617	ATXIK, XI-17, XIK	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Gb_18085	ATXIE, XIE	Myosin-11 OS=Arabidopsis thaliana (sp\|f4hwy6\|myo11_arath : 259.0)	0.02	OrthoFinder output from all 47 species
LOC_Os01g51632.1	ATXIK, XI-17,...	Myosin-17 OS=Arabidopsis thaliana (sp\|f4k5j1\|myo17_arath : 422.0)	0.01	OrthoFinder output from all 47 species
LOC_Os02g53740.2	XI-15, ATXI-I,...	class XI myosin microfilament-based motor protein	0.01	OrthoFinder output from all 47 species
MA_10435018g0010	XI-15, ATXI-I, XI-I	Myosin-15 OS=Arabidopsis thaliana (sp\|q0wpu1\|myo15_arath : 474.0)	0.01	OrthoFinder output from all 47 species
Ppi_g03285	ATXIE, XIE	class XI myosin microfilament-based motor protein &...	0.02	OrthoFinder output from all 47 species
Solyc07g063590.4.1	ATMYOS1, ATM4,...	class VIII myosin microfilament-based motor protein	0.01	OrthoFinder output from all 47 species
Solyc08g061520.3.1	XI-15, ATXI-I,...	Myosin-15 OS=Arabidopsis thaliana (sp\|q0wpu1\|myo15_arath : 724.0)	0.01	OrthoFinder output from all 47 species
Spa_g06967	ATXIK, XI-17, XIK	class XI myosin microfilament-based motor protein &...	0.01	OrthoFinder output from all 47 species
Spa_g17557	ATVIIIA, VIIIA	not classified & original description: none	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003774	cytoskeletal motor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0016459	myosin complex	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004222	metalloendopeptidase activity	IEP	HCCA
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
MF	GO:0005506	iron ion binding	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006790	sulfur compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0008150	biological_process	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
BP	GO:0009987	cellular process	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
BP	GO:0016226	iron-sulfur cluster assembly	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016866	intramolecular transferase activity	IEP	HCCA
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
BP	GO:0019725	cellular homeostasis	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
MF	GO:0020037	heme binding	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0042592	homeostatic process	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0045454	cell redox homeostasis	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046906	tetrapyrrole binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA
BP	GO:0055114	obsolete oxidation-reduction process	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001609	Myosin_head_motor_dom	169	701

External Links

No external refs found!

Cpa|evm.model.tig00021108.19 (XIF, ATMYO5, ATXIF)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation