Aliases : RPT3, NPH3, JK218
Description : Phototropic-responsive NPH3 family protein
Gene families : OG0000449 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000449_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00038p00155420 | RPT3, NPH3,... | Root phototropism protein 3 OS=Arabidopsis thaliana | 0.06 | OrthoFinder output from all 47 species | |
AMTR_s00049p00216130 | evm_27.TU.AmTr_v1... | BTB/POZ domain-containing protein At1g67900... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00061p00174950 | NPY2,... | No description available | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00061p00175030 | evm_27.TU.AmTr_v1... | BTB/POZ domain-containing protein At5g47800... | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00065p00211770 | MAB4, NPY1, ENP,... | BTB/POZ domain-containing protein NPY1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00137p00096710 | NPY2,... | BTB/POZ domain-containing protein NPY2 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
AT1G67900 | No alias | Phototropic-responsive NPH3 family protein | 0.06 | OrthoFinder output from all 47 species | |
AT2G14820 | NPY2 | Phototropic-responsive NPH3 family protein | 0.06 | OrthoFinder output from all 47 species | |
AT5G10250 | DOT3 | Phototropic-responsive NPH3 family protein | 0.06 | OrthoFinder output from all 47 species | |
Ala_g18908 | No alias | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
Ala_g21241 | No alias | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
Ala_g21688 | RPT3, NPH3, JK218 | substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
Ala_g32547 | No alias | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.04 | OrthoFinder output from all 47 species | |
Als_g08124 | No alias | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.04 | OrthoFinder output from all 47 species | |
Als_g15911 | RPT3, NPH3, JK218 | substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
Als_g17659 | No alias | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
Aob_g19940 | No alias | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g09592 | RPT3, NPH3, JK218 | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene09339.t1 | RPT3, NPH3,... | substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene17057.t1 | RPT3, NPH3,... | substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0033.g025021 | No alias | substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0076.g037787 | No alias | not classified & original description: CDS=431-2302 | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0116.g046412 | No alias | not classified & original description: CDS=1316-3601 | 0.05 | OrthoFinder output from all 47 species | |
Cba_g03356 | RPT3, NPH3, JK218 | substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
Cba_g15372 | No alias | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.11G059700.1 | Ceric.11G059700 | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.32G010700.1 | Ceric.32G010700 | not classified & original description: pacid=50597870... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.34G006100.1 | Ceric.34G006100 | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g10465 | No alias | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g16053 | RPT3, NPH3, JK218 | substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g07068 | No alias | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g31714 | No alias | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01002274001 | DOT3 | BTB/POZ domain-containing protein DOT3 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01012508001 | RPT3, NPH3, JK218 | Root phototropism protein 3 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01035968001 | MAB4, NPY1, ENP | BTB/POZ domain-containing protein NPY1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01037852001 | NPY2 | BTB/POZ domain-containing protein NPY2 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
Gb_41063 | RPT3, NPH3, JK218 | Root phototropism protein 3 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g35970.1 | RPT3, NPH3,... | component NPH3 of CUL3-BTB E3 ubiquitin ligase complex | 0.07 | OrthoFinder output from all 47 species | |
LOC_Os03g10800.2 | NPY2, LOC_Os03g10800 | BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os06g08550.1 | MAB4, NPY1, ENP,... | BTB/POZ domain-containing protein NPY1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Len_g01351 | RPT3, NPH3, JK218 | substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g10716 | No alias | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
MA_135496g0010 | RPT3, NPH3, JK218 | Root phototropism protein 3 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
MA_42230g0010 | No alias | BTB/POZ domain-containing protein At1g67900... | 0.05 | OrthoFinder output from all 47 species | |
MA_52004g0010 | RPT3, NPH3, JK218 | component NPH3 of CUL3-BTB E3 ubiquitin ligase complex | 0.06 | OrthoFinder output from all 47 species | |
Msp_g24094 | No alias | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g01322 | RPT3, NPH3, JK218 | substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... | 0.06 | OrthoFinder output from all 47 species | |
Nbi_g04882 | No alias | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g10804 | No alias | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
Pp3c4_7160V3.1 | Pp3c4_7160 | Phototropic-responsive NPH3 family protein | 0.01 | OrthoFinder output from all 47 species | |
Ppi_g06471 | RPT3, NPH3, JK218 | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0002.g000950 | No alias | not classified & original description: CDS=1-2517 | 0.04 | OrthoFinder output from all 47 species | |
Sam_g36660 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g38846 | No alias | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g39393 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc01g105680.4.1 | RPT3, NPH3,... | component NPH3 of CUL3-BTB E3 ubiquitin ligase complex | 0.03 | OrthoFinder output from all 47 species | |
Solyc05g013570.3.1 | Solyc05g013570 | BTB/POZ domain-containing protein At1g67900... | 0.06 | OrthoFinder output from all 47 species | |
Solyc10g047530.2.1 | RPT3, NPH3,... | component NPH3 of CUL3-BTB E3 ubiquitin ligase complex | 0.06 | OrthoFinder output from all 47 species | |
Solyc10g049660.2.1 | NPY2, Solyc10g049660 | BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... | 0.07 | OrthoFinder output from all 47 species | |
Spa_g07090 | No alias | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.02 | OrthoFinder output from all 47 species | |
Spa_g16161 | No alias | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g22065 | No alias | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g39095 | MAB4, NPY1, ENP | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Spa_g47140 | No alias | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e003063_P004 | NPY2, Zm00001e003063 | BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e008748_P001 | RPT3, NPH3,... | Coleoptile phototropism protein 1 OS=Oryza sativa subsp.... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e014883_P001 | RPT3, NPH3,... | component NPH3 of CUL3-BTB E3 ubiquitin ligase complex | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e014998_P003 | Zm00001e014998 | BTB/POZ domain-containing protein At1g67900... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000271 | polysaccharide biosynthetic process | RCA | Interproscan |
MF | GO:0004871 | obsolete signal transducer activity | ISS | Interproscan |
MF | GO:0005515 | protein binding | IPI | Interproscan |
CC | GO:0005634 | nucleus | ISM | Interproscan |
CC | GO:0005886 | plasma membrane | IDA | Interproscan |
CC | GO:0005886 | plasma membrane | ISM | Interproscan |
CC | GO:0005886 | plasma membrane | NAS | Interproscan |
BP | GO:0009416 | response to light stimulus | ISS | Interproscan |
BP | GO:0009637 | response to blue light | RCA | Interproscan |
BP | GO:0009638 | phototropism | IMP | Interproscan |
BP | GO:0009664 | plant-type cell wall organization | RCA | Interproscan |
BP | GO:0009785 | blue light signaling pathway | IPI | Interproscan |
BP | GO:0009785 | blue light signaling pathway | IGI | Interproscan |
BP | GO:0009825 | multidimensional cell growth | RCA | Interproscan |
BP | GO:0009832 | plant-type cell wall biogenesis | RCA | Interproscan |
BP | GO:0009932 | cell tip growth | RCA | Interproscan |
BP | GO:0010155 | regulation of proton transport | RCA | Interproscan |
BP | GO:0010817 | regulation of hormone levels | RCA | Interproscan |
BP | GO:0016567 | protein ubiquitination | IMP | Interproscan |
BP | GO:0043481 | anthocyanin accumulation in tissues in response to UV light | RCA | Interproscan |
BP | GO:0046777 | protein autophosphorylation | RCA | Interproscan |
BP | GO:0048767 | root hair elongation | RCA | Interproscan |
BP | GO:0071555 | cell wall organization | RCA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000578 | embryonic axis specification | IEP | HCCA |
BP | GO:0000904 | cell morphogenesis involved in differentiation | IEP | HCCA |
BP | GO:0001558 | regulation of cell growth | IEP | HCCA |
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
MF | GO:0004650 | polygalacturonase activity | IEP | HCCA |
MF | GO:0005200 | structural constituent of cytoskeleton | IEP | HCCA |
CC | GO:0005618 | cell wall | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006595 | polyamine metabolic process | IEP | HCCA |
BP | GO:0006598 | polyamine catabolic process | IEP | HCCA |
BP | GO:0006810 | transport | IEP | HCCA |
BP | GO:0006811 | monoatomic ion transport | IEP | HCCA |
BP | GO:0006812 | monoatomic cation transport | IEP | HCCA |
BP | GO:0006816 | calcium ion transport | IEP | HCCA |
BP | GO:0006949 | syncytium formation | IEP | HCCA |
BP | GO:0006970 | response to osmotic stress | IEP | HCCA |
BP | GO:0007030 | Golgi organization | IEP | HCCA |
BP | GO:0007389 | pattern specification process | IEP | HCCA |
BP | GO:0008156 | negative regulation of DNA replication | IEP | HCCA |
MF | GO:0008324 | monoatomic cation transmembrane transporter activity | IEP | HCCA |
BP | GO:0008356 | asymmetric cell division | IEP | HCCA |
BP | GO:0008361 | regulation of cell size | IEP | HCCA |
BP | GO:0009056 | catabolic process | IEP | HCCA |
BP | GO:0009310 | amine catabolic process | IEP | HCCA |
CC | GO:0009505 | plant-type cell wall | IEP | HCCA |
CC | GO:0009531 | secondary cell wall | IEP | HCCA |
BP | GO:0009639 | response to red or far red light | IEP | HCCA |
MF | GO:0009672 | auxin:proton symporter activity | IEP | HCCA |
BP | GO:0009719 | response to endogenous stimulus | IEP | HCCA |
BP | GO:0009725 | response to hormone | IEP | HCCA |
BP | GO:0009733 | response to auxin | IEP | HCCA |
BP | GO:0009741 | response to brassinosteroid | IEP | HCCA |
BP | GO:0009798 | axis specification | IEP | HCCA |
BP | GO:0009828 | plant-type cell wall loosening | IEP | HCCA |
BP | GO:0009831 | plant-type cell wall modification involved in multidimensional cell growth | IEP | HCCA |
BP | GO:0009833 | plant-type primary cell wall biogenesis | IEP | HCCA |
BP | GO:0009880 | embryonic pattern specification | IEP | HCCA |
BP | GO:0009911 | positive regulation of flower development | IEP | HCCA |
BP | GO:0009914 | hormone transport | IEP | HCCA |
BP | GO:0009926 | auxin polar transport | IEP | HCCA |
BP | GO:0009942 | longitudinal axis specification | IEP | HCCA |
BP | GO:0009958 | positive gravitropism | IEP | HCCA |
CC | GO:0009986 | cell surface | IEP | HCCA |
BP | GO:0010015 | root morphogenesis | IEP | HCCA |
BP | GO:0010033 | response to organic substance | IEP | HCCA |
BP | GO:0010035 | response to inorganic substance | IEP | HCCA |
BP | GO:0010053 | root epidermal cell differentiation | IEP | HCCA |
BP | GO:0010082 | regulation of root meristem growth | IEP | HCCA |
BP | GO:0010218 | response to far red light | IEP | HCCA |
BP | GO:0010315 | auxin export across the plasma membrane | IEP | HCCA |
MF | GO:0010329 | auxin efflux transmembrane transporter activity | IEP | HCCA |
BP | GO:0010583 | response to cyclopentenone | IEP | HCCA |
BP | GO:0010928 | regulation of auxin mediated signaling pathway | IEP | HCCA |
BP | GO:0010948 | negative regulation of cell cycle process | IEP | HCCA |
CC | GO:0012506 | vesicle membrane | IEP | HCCA |
BP | GO:0014070 | response to organic cyclic compound | IEP | HCCA |
MF | GO:0015075 | monoatomic ion transmembrane transporter activity | IEP | HCCA |
MF | GO:0015078 | proton transmembrane transporter activity | IEP | HCCA |
MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | HCCA |
MF | GO:0015293 | symporter activity | IEP | HCCA |
MF | GO:0015294 | solute:monoatomic cation symporter activity | IEP | HCCA |
MF | GO:0015295 | solute:proton symporter activity | IEP | HCCA |
MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | HCCA |
CC | GO:0016328 | lateral plasma membrane | IEP | HCCA |
MF | GO:0016759 | cellulose synthase activity | IEP | HCCA |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
BP | GO:0021700 | developmental maturation | IEP | HCCA |
MF | GO:0022804 | active transmembrane transporter activity | IEP | HCCA |
MF | GO:0022853 | active monoatomic ion transmembrane transporter activity | IEP | HCCA |
MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | HCCA |
BP | GO:0030001 | metal ion transport | IEP | HCCA |
BP | GO:0030154 | cell differentiation | IEP | HCCA |
BP | GO:0030308 | negative regulation of cell growth | IEP | HCCA |
CC | GO:0030312 | external encapsulating structure | IEP | HCCA |
BP | GO:0032535 | regulation of cellular component size | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
BP | GO:0032875 | regulation of DNA endoreduplication | IEP | HCCA |
BP | GO:0032876 | negative regulation of DNA endoreduplication | IEP | HCCA |
BP | GO:0033993 | response to lipid | IEP | HCCA |
BP | GO:0040008 | regulation of growth | IEP | HCCA |
BP | GO:0042221 | response to chemical | IEP | HCCA |
BP | GO:0042398 | cellular modified amino acid biosynthetic process | IEP | HCCA |
BP | GO:0042402 | cellular biogenic amine catabolic process | IEP | HCCA |
BP | GO:0042547 | cell wall modification involved in multidimensional cell growth | IEP | HCCA |
CC | GO:0045298 | tubulin complex | IEP | HCCA |
BP | GO:0045786 | negative regulation of cell cycle | IEP | HCCA |
BP | GO:0045926 | negative regulation of growth | IEP | HCCA |
BP | GO:0046686 | response to cadmium ion | IEP | HCCA |
BP | GO:0048364 | root development | IEP | HCCA |
BP | GO:0048469 | cell maturation | IEP | HCCA |
BP | GO:0048580 | regulation of post-embryonic development | IEP | HCCA |
BP | GO:0048582 | positive regulation of post-embryonic development | IEP | HCCA |
BP | GO:0048638 | regulation of developmental growth | IEP | HCCA |
BP | GO:0048764 | trichoblast maturation | IEP | HCCA |
BP | GO:0048765 | root hair cell differentiation | IEP | HCCA |
BP | GO:0048766 | root hair initiation | IEP | HCCA |
BP | GO:0050793 | regulation of developmental process | IEP | HCCA |
BP | GO:0051053 | negative regulation of DNA metabolic process | IEP | HCCA |
BP | GO:0051094 | positive regulation of developmental process | IEP | HCCA |
BP | GO:0051128 | regulation of cellular component organization | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
BP | GO:0051239 | regulation of multicellular organismal process | IEP | HCCA |
BP | GO:0051240 | positive regulation of multicellular organismal process | IEP | HCCA |
BP | GO:0060918 | auxin transport | IEP | HCCA |
BP | GO:0071695 | anatomical structure maturation | IEP | HCCA |
MF | GO:0080161 | auxin transmembrane transporter activity | IEP | HCCA |
BP | GO:0090066 | regulation of anatomical structure size | IEP | HCCA |
BP | GO:0090329 | regulation of DNA-templated DNA replication | IEP | HCCA |
BP | GO:0090627 | plant epidermal cell differentiation | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
BP | GO:0140115 | export across plasma membrane | IEP | HCCA |
BP | GO:0140352 | export from cell | IEP | HCCA |
BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
BP | GO:1901700 | response to oxygen-containing compound | IEP | HCCA |
BP | GO:1903047 | mitotic cell cycle process | IEP | HCCA |
BP | GO:1905392 | plant organ morphogenesis | IEP | HCCA |
BP | GO:2000026 | regulation of multicellular organismal development | IEP | HCCA |
BP | GO:2000038 | regulation of stomatal complex development | IEP | HCCA |
BP | GO:2000104 | negative regulation of DNA-templated DNA replication | IEP | HCCA |
BP | GO:2000243 | positive regulation of reproductive process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR027356 | NPH3_dom | 250 | 581 |
No external refs found! |