Description : DHBP synthase RibB-like alpha/beta domain;GTP cyclohydrolase II
Gene families : OG0001684 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001684_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT5G59750 | |
Cluster | HCCA: Cluster_117 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Ala_g14925 | GCH, ATGCH, RFD1, ATRIBA1 | EC_3.5 hydrolase acting on carbon-nitrogen bond, other... | 0.04 | OrthoFinder output from all 47 species | |
Cba_g04585 | GCH, ATGCH, RFD1, ATRIBA1 | EC_3.5 hydrolase acting on carbon-nitrogen bond, other... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.28G032800.1 | GCH, ATGCH,... | EC_3.5 hydrolase acting on carbon-nitrogen bond, other... | 0.03 | OrthoFinder output from all 47 species | |
Cre09.g393900 | No alias | Enzyme classification.EC_3 hydrolases.EC_3.5 hydrolase... | 0.02 | OrthoFinder output from all 47 species | |
Cre14.g620350 | GCH, ATGCH, RFD1, ATRIBA1 | Probable bifunctional riboflavin biosynthesis protein... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g12652 | GCH, ATGCH, RFD1, ATRIBA1 | EC_3.5 hydrolase acting on carbon-nitrogen bond, other... | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g14342 | GCH, ATGCH, RFD1, ATRIBA1 | EC_3.5 hydrolase acting on carbon-nitrogen bond, other... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01003433001 | GCH, ATGCH, RFD1, ATRIBA1 | Coenzyme metabolism.FMN/FAD biosynthesis.bifunctional... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01025042001 | No alias | Monofunctional riboflavin biosynthesis protein RIBA 3,... | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os05g38570.1 | LOC_Os05g38570 | Probable monofunctional riboflavin biosynthesis protein... | 0.03 | OrthoFinder output from all 47 species | |
Len_g07419 | GCH, ATGCH, RFD1, ATRIBA1 | EC_3.5 hydrolase acting on carbon-nitrogen bond, other... | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g04325 | GCH, ATGCH, RFD1, ATRIBA1 | EC_3.5 hydrolase acting on carbon-nitrogen bond, other... | 0.06 | OrthoFinder output from all 47 species | |
Ore_g07401 | GCH, ATGCH, RFD1, ATRIBA1 | EC_3.5 hydrolase acting on carbon-nitrogen bond, other... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g10851 | GCH, ATGCH, RFD1, ATRIBA1 | EC_3.5 hydrolase acting on carbon-nitrogen bond, other... | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g07923 | GCH, ATGCH, RFD1, ATRIBA1 | EC_3.5 hydrolase acting on carbon-nitrogen bond, other... | 0.04 | OrthoFinder output from all 47 species | |
Solyc11g073160.3.1 | Solyc11g073160 | Monofunctional riboflavin biosynthesis protein RIBA 3,... | 0.04 | OrthoFinder output from all 47 species | |
Spa_g11814 | GCH, ATGCH, RFD1, ATRIBA1 | EC_3.5 hydrolase acting on carbon-nitrogen bond, other... | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003935 | GTP cyclohydrolase II activity | ISS | Interproscan |
MF | GO:0008686 | 3,4-dihydroxy-2-butanone-4-phosphate synthase activity | ISS | Interproscan |
BP | GO:0009231 | riboflavin biosynthetic process | ISS | Interproscan |
CC | GO:0009507 | chloroplast | IDA | Interproscan |
CC | GO:0009507 | chloroplast | ISM | Interproscan |
BP | GO:0016556 | mRNA modification | RCA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000293 | ferric-chelate reductase activity | IEP | HCCA |
MF | GO:0004856 | xylulokinase activity | IEP | HCCA |
BP | GO:0006289 | nucleotide-excision repair | IEP | HCCA |
BP | GO:0006413 | translational initiation | IEP | HCCA |
BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
BP | GO:0006629 | lipid metabolic process | IEP | HCCA |
BP | GO:0006720 | isoprenoid metabolic process | IEP | HCCA |
BP | GO:0006787 | porphyrin-containing compound catabolic process | IEP | HCCA |
BP | GO:0008299 | isoprenoid biosynthetic process | IEP | HCCA |
BP | GO:0008610 | lipid biosynthetic process | IEP | HCCA |
BP | GO:0009657 | plastid organization | IEP | HCCA |
BP | GO:0009661 | chromoplast organization | IEP | HCCA |
BP | GO:0009668 | plastid membrane organization | IEP | HCCA |
BP | GO:0009704 | de-etiolation | IEP | HCCA |
BP | GO:0009767 | photosynthetic electron transport chain | IEP | HCCA |
MF | GO:0009975 | cyclase activity | IEP | HCCA |
BP | GO:0010027 | thylakoid membrane organization | IEP | HCCA |
BP | GO:0010109 | regulation of photosynthesis | IEP | HCCA |
BP | GO:0010155 | regulation of proton transport | IEP | HCCA |
BP | GO:0010207 | photosystem II assembly | IEP | HCCA |
BP | GO:0015996 | chlorophyll catabolic process | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
BP | GO:0016119 | carotene metabolic process | IEP | HCCA |
BP | GO:0016120 | carotene biosynthetic process | IEP | HCCA |
MF | GO:0016301 | kinase activity | IEP | HCCA |
BP | GO:0016310 | phosphorylation | IEP | HCCA |
MF | GO:0016722 | oxidoreductase activity, acting on metal ions | IEP | HCCA |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | HCCA |
MF | GO:0019200 | carbohydrate kinase activity | IEP | HCCA |
BP | GO:0022900 | electron transport chain | IEP | HCCA |
BP | GO:0032879 | regulation of localization | IEP | HCCA |
BP | GO:0033015 | tetrapyrrole catabolic process | IEP | HCCA |
BP | GO:0034762 | regulation of transmembrane transport | IEP | HCCA |
BP | GO:0034765 | regulation of monoatomic ion transmembrane transport | IEP | HCCA |
BP | GO:0042214 | terpene metabolic process | IEP | HCCA |
BP | GO:0042440 | pigment metabolic process | IEP | HCCA |
BP | GO:0042548 | regulation of photosynthesis, light reaction | IEP | HCCA |
BP | GO:0042793 | plastid transcription | IEP | HCCA |
BP | GO:0043269 | regulation of monoatomic ion transport | IEP | HCCA |
BP | GO:0043467 | regulation of generation of precursor metabolites and energy | IEP | HCCA |
BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
BP | GO:0044255 | cellular lipid metabolic process | IEP | HCCA |
MF | GO:0045436 | lycopene beta cyclase activity | IEP | HCCA |
BP | GO:0046149 | pigment catabolic process | IEP | HCCA |
BP | GO:0046246 | terpene biosynthetic process | IEP | HCCA |
BP | GO:0046777 | protein autophosphorylation | IEP | HCCA |
BP | GO:0051049 | regulation of transport | IEP | HCCA |
BP | GO:0061024 | membrane organization | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
BP | GO:0120251 | hydrocarbon biosynthetic process | IEP | HCCA |
BP | GO:0120252 | hydrocarbon metabolic process | IEP | HCCA |
BP | GO:1904062 | regulation of monoatomic cation transmembrane transport | IEP | HCCA |
No external refs found! |