AT5G44180


Description : Homeodomain-like transcriptional regulator


Gene families : OG0001590 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001590_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G44180

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00137050 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.1 OrthoFinder output from all 47 species
AMTR_s00092p00109950 evm_27.TU.AmTr_v1... Homeobox-DDT domain protein RLT3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Adi_g012033 HB-1 component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.05 OrthoFinder output from all 47 species
Aev_g17892 No alias component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Ala_g02721 No alias component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.11 OrthoFinder output from all 47 species
Ala_g14571 No alias component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Als_g14029 No alias component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.07 OrthoFinder output from all 47 species
Aob_g21500 No alias component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.07 OrthoFinder output from all 47 species
Aop_g10630 HB-1 component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Aspi01Gene48323.t1 HB-1, Aspi01Gene48323 component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.04 OrthoFinder output from all 47 species
Aspi01Gene65117.t1 Aspi01Gene65117 component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Azfi_s0032.g024736 HB-1 component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.06 OrthoFinder output from all 47 species
Azfi_s0575.g078069 HB-1 component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.04 OrthoFinder output from all 47 species
Cba_g05343 No alias component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Ceric.16G048200.1 HB-1, Ceric.16G048200 component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.1 OrthoFinder output from all 47 species
Ceric.38G016400.1 Ceric.38G016400 component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.1 OrthoFinder output from all 47 species
Cre03.g174500 No alias Homeobox-DDT domain protein RLT1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Dcu_g48258 HB-1 component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.05 OrthoFinder output from all 47 species
Ehy_g16445 No alias component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.05 OrthoFinder output from all 47 species
Ehy_g30736 No alias component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.03 OrthoFinder output from all 47 species
GSVIVT01020605001 No alias RNA biosynthesis.transcriptional activation.HB... 0.12 OrthoFinder output from all 47 species
GSVIVT01021113001 HB-1 RNA biosynthesis.transcriptional activation.HB... 0.1 OrthoFinder output from all 47 species
LOC_Os05g48820.1 LOC_Os05g48820 HOX-like transcription factor 0.05 OrthoFinder output from all 47 species
LOC_Os07g42750.1 LOC_Os07g42750 Homeobox-DDT domain protein RLT3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Lfl_g10310 No alias component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.05 OrthoFinder output from all 47 species
MA_2434g0010 No alias HOX-like transcription factor 0.1 OrthoFinder output from all 47 species
Mp1g04480.1 No alias HOX-like transcription factor 0.03 OrthoFinder output from all 47 species
Nbi_g01516 No alias component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Pir_g08329 HB-1 component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0025.g009354 No alias component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Sam_g25993 No alias component *(RINGLET/RLT) of ISWI chromatin remodeling... 0.05 OrthoFinder output from all 47 species
Sam_g50552 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g077660.3.1 HB-1, Solyc02g077660 HOX-like transcription factor 0.06 OrthoFinder output from all 47 species
Solyc07g053610.3.1 Solyc07g053610 HOX-like transcription factor 0.09 OrthoFinder output from all 47 species
Zm00001e006057_P001 Zm00001e006057 Homeobox-DDT domain protein RLT3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e020198_P001 HB-1, Zm00001e020198 HOX-like transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e026524_P003 Zm00001e026524 HOX-like transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e028032_P001 Zm00001e028032 HOX-like transcription factor 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of DNA-templated transcription ISS Interproscan
BP GO:0009630 gravitropism RCA Interproscan
BP GO:0010228 vegetative to reproductive phase transition of meristem IGI Interproscan
Type GO Term Name Evidence Source
BP GO:0000003 reproduction IEP HCCA
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0000278 mitotic cell cycle IEP HCCA
BP GO:0000723 telomere maintenance IEP HCCA
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0000904 cell morphogenesis involved in differentiation IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
BP GO:0002833 positive regulation of response to biotic stimulus IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0004888 transmembrane signaling receptor activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006346 DNA methylation-dependent heterochromatin formation IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007129 homologous chromosome pairing at meiosis IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
BP GO:0007623 circadian rhythm IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008158 hedgehog receptor activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
CC GO:0008278 cohesin complex IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009555 pollen development IEP HCCA
BP GO:0009556 microsporogenesis IEP HCCA
BP GO:0009631 cold acclimation IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009887 animal organ morphogenesis IEP HCCA
BP GO:0009888 tissue development IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010014 meristem initiation IEP HCCA
BP GO:0010053 root epidermal cell differentiation IEP HCCA
BP GO:0010073 meristem maintenance IEP HCCA
BP GO:0010090 trichome morphogenesis IEP HCCA
BP GO:0010104 regulation of ethylene-activated signaling pathway IEP HCCA
BP GO:0010112 regulation of systemic acquired resistance IEP HCCA
BP GO:0010212 response to ionizing radiation IEP HCCA
BP GO:0010332 response to gamma radiation IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0010638 positive regulation of organelle organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0016926 protein desumoylation IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0021700 developmental maturation IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0030154 cell differentiation IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031349 positive regulation of defense response IEP HCCA
BP GO:0031507 heterochromatin formation IEP HCCA
BP GO:0032103 positive regulation of response to external stimulus IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0032204 regulation of telomere maintenance IEP HCCA
BP GO:0032504 multicellular organism reproduction IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032922 circadian regulation of gene expression IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033037 polysaccharide localization IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034293 sexual sporulation IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0038023 signaling receptor activity IEP HCCA
BP GO:0040029 epigenetic regulation of gene expression IEP HCCA
BP GO:0040034 regulation of development, heterochronic IEP HCCA
BP GO:0042138 meiotic DNA double-strand break formation IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043247 telomere maintenance in response to DNA damage IEP HCCA
BP GO:0043934 sporulation IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0045595 regulation of cell differentiation IEP HCCA
BP GO:0045814 negative regulation of gene expression, epigenetic IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048229 gametophyte development IEP HCCA
BP GO:0048236 plant-type sporogenesis IEP HCCA
BP GO:0048469 cell maturation IEP HCCA
BP GO:0048511 rhythmic process IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0048584 positive regulation of response to stimulus IEP HCCA
BP GO:0048586 regulation of long-day photoperiodism, flowering IEP HCCA
BP GO:0048764 trichoblast maturation IEP HCCA
BP GO:0048765 root hair cell differentiation IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0048869 cellular developmental process IEP HCCA
BP GO:0050665 hydrogen peroxide biosynthetic process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051130 positive regulation of cellular component organization IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051321 meiotic cell cycle IEP HCCA
BP GO:0052386 cell wall thickening IEP HCCA
BP GO:0052543 callose deposition in cell wall IEP HCCA
BP GO:0052545 callose localization IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
BP GO:0061982 meiosis I cell cycle process IEP HCCA
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP HCCA
BP GO:0070297 regulation of phosphorelay signal transduction system IEP HCCA
BP GO:0070828 heterochromatin organization IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071695 anatomical structure maturation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090213 regulation of radial pattern formation IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090627 plant epidermal cell differentiation IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
BP GO:0140718 facultative heterochromatin formation IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901672 positive regulation of systemic acquired resistance IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
BP GO:1903409 reactive oxygen species biosynthetic process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
BP GO:2000022 regulation of jasmonic acid mediated signaling pathway IEP HCCA
BP GO:2000028 regulation of photoperiodism, flowering IEP HCCA
InterPro domains Description Start Stop
IPR007759 Asxl_HARE-HTH 696 764
IPR028942 WHIM1_dom 900 937
IPR018501 DDT_dom 515 570
IPR001356 Homeobox_dom 18 74
IPR028941 WHIM2_dom 1072 1144
No external refs found!