AT5G25430


Description : HCO3- transporter family


Gene families : OG0000669 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000669_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G25430
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00052p00085150 ATBOR4, BOR4,... Solute transport.carrier-mediated transport.APC... 0.07 OrthoFinder output from all 47 species
AT4G32510 No alias HCO3- transporter family 0.07 OrthoFinder output from all 47 species
Aev_g44112 No alias borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g23647 No alias borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13939 No alias borate transporter *(BOR) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0296.g063546 No alias borate transporter *(BOR) & original description: CDS=59-2467 0.04 OrthoFinder output from all 47 species
Cba_g04720 No alias borate transporter *(BOR) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g05853 No alias borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g30944 No alias borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g47091 No alias borate transporter *(BOR) & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g05031 No alias borate transporter *(BOR) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g05953 No alias borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06017 No alias borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08582 No alias borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017647001 No alias Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
GSVIVT01035800001 No alias Solute transport.carrier-mediated transport.APC... 0.07 OrthoFinder output from all 47 species
Len_g13134 No alias borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17468 No alias borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03809 No alias borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g02119 No alias borate transporter *(BOR) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0078.g017717 No alias borate transporter *(BOR) & original description: CDS=1-1821 0.03 OrthoFinder output from all 47 species
Sam_g27163 No alias borate transporter *(BOR) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g071500.3.1 Solyc06g071500 borate transporter (BOR) 0.02 OrthoFinder output from all 47 species
Spa_g08997 No alias borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02779 No alias borate transporter *(BOR) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015301 obsolete anion:anion antiporter activity ISS Interproscan
Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0000904 cell morphogenesis involved in differentiation IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004702 obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0005451 obsolete monoatomic cation:proton antiporter activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006814 sodium ion transport IEP HCCA
BP GO:0007568 aging IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0009044 xylan 1,4-beta-xylosidase activity IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0009806 lignan metabolic process IEP HCCA
BP GO:0009807 lignan biosynthetic process IEP HCCA
BP GO:0009826 unidimensional cell growth IEP HCCA
BP GO:0009827 plant-type cell wall modification IEP HCCA
BP GO:0009860 pollen tube growth IEP HCCA
BP GO:0009932 cell tip growth IEP HCCA
BP GO:0010351 lithium ion transport IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015081 sodium ion transmembrane transporter activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0015385 sodium:proton antiporter activity IEP HCCA
BP GO:0016049 cell growth IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030029 actin filament-based process IEP HCCA
BP GO:0030048 actin filament-based movement IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
CC GO:0030427 site of polarized growth IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0035725 sodium ion transmembrane transport IEP HCCA
CC GO:0035838 growing cell tip IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046910 pectinesterase inhibitor activity IEP HCCA
BP GO:0048235 pollen sperm cell differentiation IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
MF GO:0051139 metal cation:proton antiporter activity IEP HCCA
CC GO:0051286 cell tip IEP HCCA
CC GO:0060187 cell pole IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
CC GO:0090404 pollen tube tip IEP HCCA
MF GO:0097599 xylanase activity IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
MF GO:0140828 metal cation:monoatomic cation antiporter activity IEP HCCA
InterPro domains Description Start Stop
IPR011531 HCO3_transpt-like_TM_dom 456 546
IPR011531 HCO3_transpt-like_TM_dom 202 375
IPR011531 HCO3_transpt-like_TM_dom 9 189
No external refs found!