Heatmap: Cluster_100 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg cell
Ovule
Uninucleate microspore (Col-0)
Uninucleate microspore (Ler-0)
Pollen (bicellular, Col-0)
Pollen (late bicellular, Col-0)
Pollen (bicellular, Ler-0)
Pollen (tricellular, Col-0)
Pollen (tricellular, Ler-0)
Pollen (mature, Col-0)
Pollen (mature, Ler-0)
Sperm
Pollen tube (Col-0)
Flower (receptacles)
Flower (floral buds)
Flower (sepals)
Flower (petals)
Flower (stamen filaments)
Flower (anthers)
Flower (carpels)
Flower (stigmatic tissue)
Pedicel
Axis of the inflorescence
Silique
Silique (senescent)
Pods of siliques
Pods of siliques (senescent)
Embryo
Endosperm
Seed
Seed (young)
Seed (germinating)
Seedling
Seedling (etiolated)
Meristem
Stem (internode)
Stem (internode, senescent)
Stems
Leaf (rosette)
Epidermis cells
Mature guard cells
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root (apex)
Root (stele)
Root (QC cells)
Root (tip)
-5.35 -3.97 -4.51 -5.07 -5.6 -4.16 -5.44 -0.77 -3.13 2.18 -2.01 -4.61 5.25 -0.55 -3.01 -6.19 -5.36 -6.13 1.12 -4.16 -5.72 -7.07 -5.56 -3.68 -7.81 -5.52 -3.19 -5.28 -4.11 -8.6 -2.84 -5.16 -6.84 -5.86 -7.16 -5.07 -6.35 -4.64 -6.47 -4.78 -4.39 -2.94 -2.23 -5.14 -8.3 - -6.61 -3.66
-8.4 -7.4 -5.94 -7.6 -8.73 -4.69 -8.55 -0.57 3.21 1.82 3.6 -5.4 4.39 -6.53 -2.81 -7.38 -5.98 -5.19 -0.13 -6.8 -7.25 -7.0 -7.61 -5.5 -7.01 -5.83 -5.34 - -6.82 - -6.94 -7.98 -6.78 -7.74 -4.99 -6.31 -7.12 -5.66 -8.22 - - -5.64 - - -6.55 - - -
AT1G19090 (CRK1)
- -8.24 -3.93 -2.5 -0.52 0.89 -0.79 2.11 2.38 3.24 2.95 -5.7 3.75 -4.29 -0.89 -8.28 -8.41 -4.35 1.84 -4.54 - - - -4.75 -6.27 -5.64 -3.63 - -8.48 - -5.18 - - - -10.57 - -7.1 - -7.85 - - - - - - - - -
-7.27 -7.39 -4.12 -7.07 -5.35 -2.91 -6.13 1.34 2.72 3.2 3.1 -3.88 4.13 -5.43 -1.92 -8.57 -7.47 -4.99 1.43 -5.65 -10.76 -8.75 -7.46 -5.28 -7.22 -6.24 -4.23 -9.22 - -11.08 -5.84 -10.91 -10.18 -10.93 -7.98 -6.16 -9.42 -7.55 -8.24 - - -11.14 -8.36 -8.15 -8.47 - - -8.63
-9.83 -7.82 -5.47 -6.8 -4.84 -4.03 -7.81 -0.19 2.88 2.72 3.27 -5.78 4.3 -5.58 -3.29 -7.1 -8.65 -5.48 1.73 -5.22 - - - -5.48 -7.22 -6.21 -3.28 - -9.71 - -5.74 - - - -9.22 -7.45 -8.62 -11.21 -8.29 - - - - - - - - -
-5.62 -4.57 -5.05 - - -3.71 -3.78 0.85 2.69 2.85 2.83 -3.82 4.42 -2.92 1.03 - - - -0.2 -7.03 - - - -4.12 - -4.36 -3.85 - - - - - -5.11 -4.98 -5.09 -2.26 - -2.7 - - - - - - - - - -
-8.17 -7.38 -3.54 -4.27 -3.41 -1.22 -2.87 2.49 2.32 3.22 2.64 -5.58 3.73 -5.39 -0.56 -7.12 -6.67 -3.52 2.73 -5.28 -5.81 - - -4.15 -6.03 -5.43 -2.88 - - -9.6 -4.55 -10.84 -10.68 -9.33 -7.75 - -7.87 -8.91 -9.12 - - - - -8.17 -7.17 - - -
AT1G48020 (PMEI1)
-7.54 -8.69 -4.47 -6.62 -5.55 -3.17 -6.15 1.28 2.54 2.72 3.43 -5.33 4.03 -5.4 -2.47 -8.01 -7.42 -4.26 2.38 -4.69 -11.2 -9.75 -12.95 -4.15 -5.97 -5.39 -3.38 -10.09 -12.98 -11.37 -4.56 -12.1 -12.92 -13.92 -10.13 -11.02 -8.66 -11.5 -8.08 -9.4 -10.52 - -11.37 - -12.94 - - -14.11
-10.35 -7.64 -4.46 -9.01 -5.4 -3.1 -7.92 1.65 1.06 3.28 0.98 -6.2 4.38 -4.75 -1.09 -5.79 -4.65 -3.06 3.17 -4.33 -8.86 -9.89 - -3.88 -5.68 -4.98 -2.72 - - -9.46 -4.15 -11.22 -13.78 - -7.35 - -9.77 -11.08 -7.68 - - - - - -11.28 - - -
AT1G61563 (RALFL8)
-6.05 -8.12 -3.12 -5.08 -0.47 1.9 -2.61 2.62 1.86 2.96 2.05 -4.24 4.16 -5.32 -1.72 -8.9 -7.9 -5.39 1.61 -5.66 -6.78 -10.0 -12.52 -4.88 -7.16 -6.02 -3.65 - -11.9 -10.47 -5.31 -12.36 -15.99 - -10.59 -13.59 -9.33 -11.65 -7.88 - - - - - -12.49 - - -
-2.01 -0.76 -2.26 -2.55 -1.75 -1.35 -3.27 2.38 2.96 2.02 2.8 -4.08 3.27 -1.87 -0.2 -2.99 -2.83 -2.64 0.5 -0.59 -1.96 -2.55 -1.46 -2.8 -1.97 -2.56 0.68 -0.79 -1.99 -4.11 -1.69 -2.82 -2.39 -2.12 -1.51 -1.76 -0.98 -1.31 -0.56 -4.3 -6.53 -2.15 -1.71 -0.76 -3.17 -5.53 -8.49 -1.77
AT2G03840 (TET13)
-8.69 -8.86 -5.17 -6.23 -6.9 -4.52 - -0.05 2.62 2.66 3.13 -4.79 4.51 -5.76 -3.9 -7.08 -7.49 -4.58 1.35 -5.11 - - - -5.02 -6.63 -5.68 -4.15 - -7.14 - -5.44 -10.72 - -10.06 -8.3 - - -10.61 -8.67 - - -7.3 - -7.62 - - - -
-3.8 -0.32 -5.25 -7.59 -6.18 -3.91 -6.89 0.36 2.1 2.16 2.75 -6.78 4.23 -2.76 -1.63 -2.58 -5.54 -4.18 0.99 -1.08 0.92 -5.21 -5.39 -3.06 -2.79 -3.36 1.11 -7.89 -3.11 -7.08 -0.48 -2.38 -2.45 -1.2 -1.63 -3.97 -3.19 -2.7 -1.67 -2.27 -0.69 -2.39 -4.78 -9.79 -4.12 - - -4.94
-9.19 -9.01 -3.71 -6.31 -4.61 -1.15 -3.88 1.99 2.68 2.5 2.75 -5.84 4.42 -5.46 -0.46 - -7.08 -7.2 1.13 -5.5 - - - -5.23 - -6.51 -4.27 - -8.19 - -6.13 -5.98 - -9.95 -10.24 -7.89 - -12.23 -8.62 - - -5.3 -7.8 - - - - -
- -9.43 -4.03 -4.11 -1.15 0.91 -1.44 3.36 0.51 0.91 -0.48 -5.24 4.77 -7.84 0.22 - -4.63 -5.46 1.24 -6.69 - - - -6.75 -6.55 -6.23 -6.27 - -7.59 - -6.95 - - - -9.88 - - -10.48 -8.84 - - - - - - - - -
AT2G22055 (RALFL15)
-5.58 -7.81 -3.62 -7.2 -4.44 -1.81 -5.96 2.41 2.34 3.22 3.07 -4.13 4.02 -4.93 -4.05 -8.5 -7.94 -5.24 1.54 -5.4 -11.46 -10.05 -11.03 -4.6 -6.76 -5.86 -3.42 - -10.54 -11.3 -5.53 -13.1 -12.51 - -10.46 - - -11.76 -7.76 - - -10.1 - - - - - -
AT2G22290 (RABH1d)
- -7.37 -3.8 -3.58 -4.38 0.56 -3.35 2.87 2.48 0.77 1.24 -4.29 4.57 -8.08 -1.05 -7.76 - -5.16 0.11 -6.84 - - - -6.78 - -8.82 -5.28 - -2.15 - -6.87 -2.43 -5.01 -3.92 -11.69 -7.74 - -7.54 -8.33 - - 1.47 -1.77 - -1.71 - - -7.23
-1.53 -5.6 -3.4 -3.68 -3.93 -1.81 -4.14 1.98 3.04 2.35 3.06 -2.93 3.97 -5.48 0.3 -7.13 -8.28 -4.32 1.77 -3.89 -5.32 - - -4.88 -5.91 -5.65 -4.33 -3.11 -2.15 -4.88 -6.1 -8.03 -8.91 -9.24 -4.55 -3.76 -3.11 -7.61 -6.51 -4.58 - -5.5 -5.2 - - - -7.02 -6.34
AT2G25630 (BGLU14)
- -10.41 -7.92 -2.56 -1.84 -0.43 0.54 -1.57 2.6 0.34 3.79 -6.23 4.46 -4.29 - - -6.97 - -3.16 -7.19 - - - -6.08 - -8.4 -2.9 - 0.55 - -6.8 - -9.96 - -10.05 - - -9.56 -9.98 - - - - - - - -6.74 -
AT2G33775 (RALFL19)
-6.67 -8.01 -4.09 -5.23 -3.31 -0.33 -3.29 2.34 2.22 3.23 2.35 -3.66 4.2 -5.07 -1.56 -9.03 -7.53 -4.85 1.86 -4.98 -10.15 - - -4.88 -7.29 -6.13 -3.54 - -10.86 -10.64 -5.43 -12.88 -9.98 -13.45 -9.72 - -8.06 -9.75 -7.64 - - - - - -11.38 - - -
-1.51 -4.22 -5.21 - -2.84 0.16 -3.72 2.42 3.06 2.64 3.06 -5.39 3.85 -5.42 -0.27 -7.94 - - 1.34 -5.22 - - - -5.59 - -5.79 -3.98 - -5.17 -8.44 -4.41 - - - -10.58 - - - -8.79 - - - - - - - - -
-7.89 -7.35 -2.84 -2.89 -0.85 1.42 -0.99 2.55 2.61 2.77 2.96 -2.56 3.81 -4.79 -1.92 -7.02 -5.75 -4.77 1.36 -4.94 -5.18 -7.36 -9.21 -4.28 -6.27 -4.78 -3.07 -10.21 -13.54 -9.87 -5.43 -10.0 -10.4 -12.95 -10.89 -8.44 -8.19 -8.58 -7.46 -12.38 - -11.1 -14.33 - - - - -
AT3G05140 (RBK2)
-5.54 -5.12 -4.56 -6.81 -4.81 -1.74 -4.31 2.63 2.91 2.67 3.03 -5.15 3.79 -4.45 -0.95 -6.35 -7.3 -6.24 1.44 -4.48 -9.39 -5.39 -3.61 -4.98 -1.85 -5.9 -4.36 -4.94 -9.01 -0.4 -5.88 -4.88 -3.25 -4.14 -4.21 -4.72 -8.17 -3.18 -5.77 - - -5.15 -5.36 -3.08 -3.76 - -7.19 -5.55
-7.04 -2.2 -3.38 -7.4 -2.71 0.24 -3.94 1.99 2.75 2.84 3.12 -4.33 3.91 -1.05 -2.83 -3.4 -3.5 -1.8 1.08 -2.28 -1.87 -2.32 -1.53 -4.73 -6.82 -5.45 -5.55 - -4.13 -6.94 -3.89 - -8.21 -7.2 -5.63 -4.32 - -6.18 -7.91 - - - -7.42 - -7.4 - - -
-6.83 -7.74 -2.27 -2.52 -1.34 -1.03 -2.15 2.22 0.5 3.38 1.67 -3.63 4.53 -4.0 -0.7 -7.69 -7.52 -4.66 1.42 -4.23 -7.57 - -7.46 -5.15 -6.22 -6.06 -4.54 - -4.8 - -6.25 - - - -10.41 - -7.33 - -8.38 - - - - - -7.35 - - -
- -10.64 -4.62 -8.18 -5.7 -2.38 -5.95 1.58 2.22 0.51 1.29 -9.3 5.11 -8.72 -1.32 - - -6.32 0.37 -7.91 - - - -7.18 -6.95 -8.01 -5.4 - - - -6.57 - - - - - - -11.47 - -7.23 - - - - - - - -
-6.27 -2.76 -5.34 -3.69 -4.6 -1.45 -3.24 2.48 2.55 1.83 2.14 -5.59 4.49 -4.43 -1.18 -9.34 -7.62 -5.77 1.5 -4.24 - - - -1.41 - -3.26 -4.35 -8.3 0.25 - -2.37 - - -10.67 -10.04 - - -10.85 -8.81 - - - - - -8.33 - -11.61 -
AT3G52010 (scpl37)
-7.21 -7.96 -4.81 -7.27 -5.16 -3.52 -5.9 1.2 2.28 3.11 3.3 -4.59 4.17 -4.83 -1.05 -8.67 -8.14 -5.69 1.74 -4.65 -7.39 -11.6 -19.03 -4.66 -7.39 -5.6 -3.59 -12.31 -10.08 -10.59 -4.64 -12.11 -10.94 - -10.91 - -9.82 -11.11 -7.96 -12.39 - -11.43 - - - - - -
-4.72 -7.68 -2.22 -1.86 -1.21 0.71 -1.12 1.71 1.65 1.4 1.3 -6.44 5.0 -8.9 -1.55 - - - 0.06 -6.45 - - - -8.43 -7.28 -7.91 -5.99 -5.75 - -8.67 -7.34 -7.54 - - -10.76 - - -10.87 -7.39 - - -4.28 -5.78 - - - - -
-9.62 -7.42 -3.89 -4.2 -3.99 -1.11 -2.8 3.19 3.17 2.2 2.69 -6.09 3.88 -5.61 -0.83 -6.37 -4.71 -5.47 1.3 -5.72 -6.9 -6.77 -8.89 -5.16 -7.59 -5.71 -5.34 - -10.25 - -5.62 -7.84 -6.85 -8.03 -7.22 -8.87 - -6.83 -8.31 - - - - - -7.78 - - -
- -8.34 -2.97 -6.0 -3.49 -2.49 -4.31 2.55 2.38 2.27 2.24 -3.85 4.44 -6.04 0.91 -7.93 - -4.88 1.62 -5.89 - - - -6.04 -5.65 -6.65 -4.25 - -7.07 - -6.25 - -6.56 - -9.48 - -7.24 -9.0 -8.26 - - - - - - - - -8.46
-8.78 -9.05 -4.82 -4.43 -5.06 -0.21 -3.55 2.98 3.71 0.72 2.32 -7.34 4.16 -8.06 -2.81 -5.43 -6.4 - 0.21 -6.39 - - -7.13 -7.27 - -6.91 -5.66 - -8.64 - -9.82 -5.32 -8.47 - -8.69 -6.2 - -6.65 -8.0 -7.17 - -6.2 - - - - - -
-7.09 -7.56 -4.29 -8.36 -4.97 -2.42 -5.92 1.94 1.59 3.37 2.21 -4.25 4.21 -4.69 -1.43 -7.31 -6.4 -3.97 2.7 -4.25 -8.78 -9.2 - -3.88 -5.96 -4.89 -2.78 -8.94 -9.23 -9.28 -4.38 -11.34 -11.34 -12.37 -8.96 -11.96 -8.47 -10.14 -7.12 -12.93 -12.54 -11.97 -10.56 -12.3 -12.88 - - -11.75
-8.92 -9.94 -5.48 -6.69 -7.34 -4.3 -5.23 -0.28 2.73 2.3 3.94 -4.55 4.1 -5.64 -4.76 -9.68 -7.1 -4.7 1.42 -4.96 - - - -4.64 -6.65 -5.95 -3.9 - -7.19 - -5.79 -12.19 -11.17 - -10.79 -9.77 - -11.9 -7.96 - - - -9.68 - - - -11.64 -10.86
0.85 -6.08 -3.04 - -1.6 -0.18 -3.51 2.93 1.59 1.13 1.79 -5.18 4.62 - 1.58 - - - -1.08 -5.86 - - - -5.07 - - - - -2.26 - - - - - - -2.81 - -4.59 -5.31 - - - - - - - - -
-6.3 -8.11 -4.71 -6.61 -5.1 -3.01 -5.52 1.33 2.64 2.88 3.38 -3.75 4.08 -4.86 -1.29 -8.68 -8.67 -5.16 1.83 -5.39 -9.92 -10.75 - -4.88 -7.16 -5.65 -3.93 - -10.45 -9.27 -5.19 -11.63 -12.63 -10.84 -10.73 - -9.28 -11.14 -7.92 - - -9.8 -9.73 - -10.71 - - -
-4.11 -8.04 -4.29 -2.1 -2.78 -0.14 -0.76 2.06 2.5 2.69 2.74 -5.52 4.15 -5.37 -1.51 -6.65 -7.69 -6.12 2.22 -4.99 - - - -5.21 -8.41 -5.87 -4.59 - -7.04 - -4.97 -6.66 -8.67 -7.2 -9.81 -9.08 -7.46 -9.12 -8.36 - - -4.9 - - -7.99 - - -
-11.13 -8.39 -4.58 -6.53 -5.55 -6.49 -8.62 0.45 2.73 3.09 3.38 -5.79 3.94 -5.2 -1.74 -8.59 -7.72 -5.05 2.33 -4.66 - -9.28 - -4.53 -6.87 -5.16 -3.24 - -11.11 - -4.99 - - - -9.88 - - -11.42 -8.26 - - - - - - - - -
-8.31 -9.18 -3.51 -3.64 -2.04 1.25 -1.21 2.7 2.91 2.4 3.39 -4.64 3.69 -6.09 -2.22 -9.9 -9.41 -7.05 0.7 -6.26 -11.19 - - -5.34 -8.92 -6.32 -4.44 - - -7.98 -6.47 - - - -12.19 - -8.72 -12.74 -9.15 - - - -9.77 - - - - -
-8.15 -7.84 -4.58 -7.39 -5.6 -2.82 -5.99 1.63 2.81 2.69 3.1 -5.44 4.27 -5.24 -2.28 -8.04 -7.61 -5.33 1.5 -5.47 -10.77 -11.18 -13.93 -5.19 -7.22 -6.14 -3.89 -14.84 -13.71 -11.65 -5.58 -13.28 -13.91 - -10.14 -13.38 -9.59 -11.97 -8.15 - - -13.96 -12.89 - -14.86 - - -16.09
-7.99 -5.63 -7.39 -3.26 -5.52 -4.65 -4.03 -0.36 2.15 1.22 2.23 -5.94 5.05 -7.34 -2.42 - - - 0.84 -6.23 - - - -6.03 -6.46 -6.68 -4.22 - - - -4.62 - - - -9.22 -7.18 - -10.63 -10.97 - - -2.73 -4.11 - -4.52 - - -8.33
-2.64 -2.81 -2.14 -2.74 -1.55 0.73 -3.12 2.36 2.07 1.02 1.23 -0.9 4.72 -2.51 -0.76 -4.79 -6.15 - 0.17 -4.02 -4.32 - - -4.59 -3.28 -8.16 0.84 -5.96 -4.36 - -4.1 -2.35 -6.92 -6.73 -5.92 -6.07 -5.97 -4.97 -5.05 - - - - -5.4 - - -3.15 -6.13
-6.83 -4.11 -2.96 -1.72 -1.1 1.46 -0.39 2.79 2.79 2.94 3.1 -2.47 3.44 -5.21 -2.31 -9.13 -8.79 -5.94 1.0 -4.57 -9.2 -11.81 -15.01 -5.42 -7.16 -6.2 -4.17 - -11.36 -8.01 -3.82 -12.78 -14.24 -14.85 -11.02 -15.07 -10.39 -11.73 -8.51 - - -10.76 -12.42 -10.16 - - - -13.0
- -10.05 -3.02 -1.52 -2.57 1.21 0.32 3.21 2.33 -1.13 -0.97 -8.15 4.75 -5.45 -1.07 -10.08 -8.74 -7.86 -0.39 -8.05 -10.73 -8.66 -10.54 -6.06 -11.01 -9.86 -7.45 - -7.55 -11.39 -2.36 -11.62 - - -11.21 - -8.91 -11.89 -12.55 -8.25 -8.6 - - - - -3.63 - -
-8.78 -9.22 -6.09 -7.9 -6.03 -4.09 - -0.16 1.25 2.43 2.07 -7.41 5.03 -6.35 -4.82 -8.01 - -5.97 1.13 -6.06 - - - -5.65 -5.97 -6.28 -4.48 -7.77 - -8.69 -6.69 - -9.74 -9.65 -11.87 - - -9.62 -8.31 - - -6.89 - - - - - -
-7.08 -7.37 -3.8 -8.35 -5.15 -1.88 -6.46 2.36 2.33 3.35 2.95 -4.38 3.74 -4.87 -1.9 -7.73 -7.98 -4.32 2.44 -4.68 -11.31 -10.9 -10.88 -3.92 -5.71 -5.14 -2.77 - -11.36 -9.3 -4.86 -13.38 -12.36 - -10.24 - -8.23 -10.32 -7.26 - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.