AT5G09660 (PMDH2)

Aliases : PMDH2

Description : peroxisomal NAD-malate dehydrogenase 2

Gene families : OG0000664 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000664_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G09660

Target	Alias	Description	ECC score	Gene Family Method
Aev_g01101	PMDH1	peroxisomal NAD-dependent malate dehydrogenase &...	0.07	OrthoFinder output from all 47 species
Ala_g01385	PMDH1	peroxisomal NAD-dependent malate dehydrogenase &...	0.1	OrthoFinder output from all 47 species
Als_g06082	PMDH1	peroxisomal NAD-dependent malate dehydrogenase &...	0.12	OrthoFinder output from all 47 species
Aob_g07797	PMDH1	peroxisomal NAD-dependent malate dehydrogenase &...	0.08	OrthoFinder output from all 47 species
Aop_g00482	PMDH1	peroxisomal NAD-dependent malate dehydrogenase &...	0.09	OrthoFinder output from all 47 species
Aspi01Gene69164.t1	PMDH1, Aspi01Gene69164	not classified & original description: none	0.11	OrthoFinder output from all 47 species
Cba_g02437	PMDH1	peroxisomal NAD-dependent malate dehydrogenase &...	0.13	OrthoFinder output from all 47 species
Ceric.28G009700.1	PMDH1, Ceric.28G009700	peroxisomal NAD-dependent malate dehydrogenase &...	0.18	OrthoFinder output from all 47 species
Dac_g23577	PMDH1	peroxisomal NAD-dependent malate dehydrogenase &...	0.04	OrthoFinder output from all 47 species
Dcu_g01037	PMDH1	peroxisomal NAD-dependent malate dehydrogenase &...	0.07	OrthoFinder output from all 47 species
Dde_g20852	PMDH1	peroxisomal NAD-dependent malate dehydrogenase &...	0.11	OrthoFinder output from all 47 species
Ehy_g00867	PMDH1	peroxisomal NAD-dependent malate dehydrogenase &...	0.03	OrthoFinder output from all 47 species
GSVIVT01036965001	PMDH1	Lipid metabolism.lipid degradation.fatty acid...	0.22	OrthoFinder output from all 47 species
Gb_00793	PMDH1	peroxisomal NAD-dependent malate dehydrogenase	0.06	OrthoFinder output from all 47 species
LOC_Os03g56280.1	PMDH1, LOC_Os03g56280	peroxisomal NAD-dependent malate dehydrogenase	0.14	OrthoFinder output from all 47 species
LOC_Os07g43700.2	MDH, LOC_Os07g43700	malate dehydrogenase component of AAA-ATPase motor complex	0.08	OrthoFinder output from all 47 species
Lfl_g01023	PMDH1	peroxisomal NAD-dependent malate dehydrogenase &...	0.1	OrthoFinder output from all 47 species
MA_87937g0010	PMDH1	peroxisomal NAD-dependent malate dehydrogenase	0.07	OrthoFinder output from all 47 species
Mp2g08440.1	PMDH1	peroxisomal NAD-dependent malate dehydrogenase	0.12	OrthoFinder output from all 47 species
Msp_g06714	PMDH1	peroxisomal NAD-dependent malate dehydrogenase &...	0.11	OrthoFinder output from all 47 species
Nbi_g02729	PMDH1	peroxisomal NAD-dependent malate dehydrogenase &...	0.15	OrthoFinder output from all 47 species
Nbi_g12574	mMDH1	mitochondrial NAD-dependent malate dehydrogenase &...	0.02	OrthoFinder output from all 47 species
Ore_g20188	PMDH1	peroxisomal NAD-dependent malate dehydrogenase &...	0.07	OrthoFinder output from all 47 species
Pir_g12090	PMDH1	peroxisomal NAD-dependent malate dehydrogenase &...	0.13	OrthoFinder output from all 47 species
Pnu_g00639	PMDH1	peroxisomal NAD-dependent malate dehydrogenase &...	0.04	OrthoFinder output from all 47 species
Ppi_g02813	PMDH1	peroxisomal NAD-dependent malate dehydrogenase &...	0.18	OrthoFinder output from all 47 species
Ppi_g61921	MDH	malate dehydrogenase component of AAA-ATPase motor...	0.15	OrthoFinder output from all 47 species
Sam_g16454	No alias	peroxisomal NAD-dependent malate dehydrogenase &...	0.09	OrthoFinder output from all 47 species
Smo270780	PMDH1	Lipid metabolism.lipid degradation.fatty acid...	0.03	OrthoFinder output from all 47 species
Solyc01g106480.4.1	PMDH1, Solyc01g106480	peroxisomal NAD-dependent malate dehydrogenase	0.09	OrthoFinder output from all 47 species
Spa_g10807	PMDH1	peroxisomal NAD-dependent malate dehydrogenase &...	0.08	OrthoFinder output from all 47 species
Tin_g01665	PMDH1	peroxisomal NAD-dependent malate dehydrogenase &...	0.08	OrthoFinder output from all 47 species
Zm00001e005838_P001	PMDH1, Zm00001e005838	peroxisomal NAD-dependent malate dehydrogenase	0.11	OrthoFinder output from all 47 species
Zm00001e035622_P001	MDH, Zm00001e035622	Malate dehydrogenase, chloroplastic OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	RCA	Interproscan
BP	GO:0000165	MAPK cascade	RCA	Interproscan
BP	GO:0002682	regulation of immune system process	None	Extended
BP	GO:0002831	regulation of response to biotic stimulus	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
CC	GO:0005773	vacuole	IDA	Interproscan
CC	GO:0005777	peroxisome	IDA	Interproscan
BP	GO:0006081	cellular aldehyde metabolic process	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006090	pyruvate metabolic process	None	Extended
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0006098	pentose-phosphate shunt	RCA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	RCA	Interproscan
BP	GO:0006364	rRNA processing	RCA	Interproscan
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006544	glycine metabolic process	None	Extended
BP	GO:0006546	glycine catabolic process	RCA	Interproscan
BP	GO:0006605	protein targeting	None	Extended
BP	GO:0006612	protein targeting to membrane	RCA	Interproscan
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	None	Extended
BP	GO:0006636	unsaturated fatty acid biosynthetic process	RCA	Interproscan
BP	GO:0006644	phospholipid metabolic process	None	Extended
BP	GO:0006650	glycerophospholipid metabolic process	None	Extended
BP	GO:0006655	phosphatidylglycerol biosynthetic process	RCA	Interproscan
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006733	obsolete oxidoreduction coenzyme metabolic process	RCA	Interproscan
BP	GO:0006739	NADP metabolic process	None	Extended
BP	GO:0006740	NADPH regeneration	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006766	vitamin metabolic process	RCA	Interproscan
BP	GO:0006778	porphyrin-containing compound metabolic process	None	Extended
BP	GO:0006779	porphyrin-containing compound biosynthetic process	None	Extended
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0008652	amino acid biosynthetic process	RCA	Interproscan
BP	GO:0008654	phospholipid biosynthetic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009063	amino acid catabolic process	None	Extended
BP	GO:0009069	serine family amino acid metabolic process	None	Extended
BP	GO:0009071	serine family amino acid catabolic process	None	Extended
BP	GO:0009072	aromatic amino acid metabolic process	RCA	Interproscan
BP	GO:0009106	lipoate metabolic process	RCA	Interproscan
BP	GO:0009108	obsolete coenzyme biosynthetic process	RCA	Interproscan
BP	GO:0009117	nucleotide metabolic process	RCA	Interproscan
BP	GO:0009240	isopentenyl diphosphate biosynthetic process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	RCA	Interproscan
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009526	plastid envelope	None	Extended
CC	GO:0009536	plastid	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	RCA	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009657	plastid organization	RCA	Interproscan
BP	GO:0009658	chloroplast organization	None	Extended
BP	GO:0009694	jasmonic acid metabolic process	None	Extended
BP	GO:0009695	jasmonic acid biosynthetic process	RCA	Interproscan
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009735	response to cytokinin	IDA	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009853	photorespiration	RCA	Interproscan
BP	GO:0009862	systemic acquired resistance, salicylic acid mediated signaling pathway	RCA	Interproscan
BP	GO:0009863	salicylic acid mediated signaling pathway	None	Extended
BP	GO:0009867	jasmonic acid mediated signaling pathway	RCA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009894	regulation of catabolic process	None	Extended
BP	GO:0009902	chloroplast relocation	RCA	Interproscan
CC	GO:0009941	chloroplast envelope	IDA	Interproscan
BP	GO:0009965	leaf morphogenesis	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010103	stomatal complex morphogenesis	RCA	Interproscan
BP	GO:0010207	photosystem II assembly	RCA	Interproscan
BP	GO:0010304	PSII associated light-harvesting complex II catabolic process	RCA	Interproscan
BP	GO:0010310	regulation of hydrogen peroxide metabolic process	RCA	Interproscan
BP	GO:0010363	regulation of plant-type hypersensitive response	RCA	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010565	regulation of cellular ketone metabolic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0010941	regulation of cell death	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0015994	chlorophyll metabolic process	RCA	Interproscan
BP	GO:0015995	chlorophyll biosynthetic process	RCA	Interproscan
BP	GO:0016042	lipid catabolic process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
BP	GO:0016054	organic acid catabolic process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016072	rRNA metabolic process	None	Extended
BP	GO:0016108	tetraterpenoid metabolic process	None	Extended
BP	GO:0016109	tetraterpenoid biosynthetic process	None	Extended
BP	GO:0016114	terpenoid biosynthetic process	None	Extended
BP	GO:0016116	carotenoid metabolic process	None	Extended
BP	GO:0016117	carotenoid biosynthetic process	RCA	Interproscan
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	None	Extended
MF	GO:0016615	malate dehydrogenase activity	ISS	Interproscan
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019216	regulation of lipid metabolic process	RCA	Interproscan
BP	GO:0019217	regulation of fatty acid metabolic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019220	regulation of phosphate metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	RCA	Interproscan
BP	GO:0019362	pyridine nucleotide metabolic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	None	Extended
BP	GO:0019748	secondary metabolic process	RCA	Interproscan
BP	GO:0019750	chloroplast localization	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0030154	cell differentiation	RCA	Interproscan
BP	GO:0030163	protein catabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0031329	regulation of cellular catabolic process	None	Extended
BP	GO:0031347	regulation of defense response	None	Extended
BP	GO:0031348	negative regulation of defense response	RCA	Interproscan
BP	GO:0031399	regulation of protein modification process	None	Extended
BP	GO:0031407	oxylipin metabolic process	None	Extended
BP	GO:0031408	oxylipin biosynthetic process	RCA	Interproscan
CC	GO:0031967	organelle envelope	None	Extended
CC	GO:0031975	envelope	None	Extended
BP	GO:0031998	regulation of fatty acid beta-oxidation	IMP	Interproscan
BP	GO:0031998	regulation of fatty acid beta-oxidation	IGI	Interproscan
BP	GO:0032101	regulation of response to external stimulus	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0033013	tetrapyrrole metabolic process	None	Extended
BP	GO:0033014	tetrapyrrole biosynthetic process	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033559	unsaturated fatty acid metabolic process	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0035303	regulation of dephosphorylation	None	Extended
BP	GO:0035304	regulation of protein dephosphorylation	RCA	Interproscan
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042440	pigment metabolic process	None	Extended
CC	GO:0042579	microbody	ISS	Interproscan
BP	GO:0043067	regulation of programmed cell death	None	Extended
BP	GO:0043085	positive regulation of catalytic activity	RCA	Interproscan
BP	GO:0043094	cellular metabolic compound salvage	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0043903	regulation of biological process involved in symbiotic interaction	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0044093	positive regulation of molecular function	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044242	cellular lipid catabolic process	RCA	Interproscan
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044272	sulfur compound biosynthetic process	RCA	Interproscan
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044282	small molecule catabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0045017	glycerolipid biosynthetic process	None	Extended
BP	GO:0045088	regulation of innate immune response	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0045893	positive regulation of DNA-templated transcription	RCA	Interproscan
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0046148	pigment biosynthetic process	None	Extended
BP	GO:0046320	regulation of fatty acid oxidation	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0046395	carboxylic acid catabolic process	None	Extended
BP	GO:0046471	phosphatidylglycerol metabolic process	None	Extended
BP	GO:0046474	glycerophospholipid biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046486	glycerolipid metabolic process	None	Extended
BP	GO:0046490	isopentenyl diphosphate metabolic process	None	Extended
BP	GO:0046496	nicotinamide nucleotide metabolic process	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
CC	GO:0048046	apoplast	IDA	Interproscan
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048585	negative regulation of response to stimulus	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050776	regulation of immune response	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050790	regulation of catalytic activity	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0050994	regulation of lipid catabolic process	None	Extended
BP	GO:0051156	glucose 6-phosphate metabolic process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051174	regulation of phosphorus metabolic process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051254	positive regulation of RNA metabolic process	None	Extended
BP	GO:0051640	organelle localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051644	plastid localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051656	establishment of organelle localization	None	Extended
BP	GO:0051667	establishment of plastid localization	None	Extended
BP	GO:0051668	localization within membrane	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0062012	regulation of small molecule metabolic process	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:0072524	pyridine-containing compound metabolic process	None	Extended
BP	GO:0072657	protein localization to membrane	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080093	regulation of photorespiration	IMP	Interproscan
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0080135	regulation of cellular response to stress	None	Extended
BP	GO:0090150	establishment of protein localization to membrane	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
BP	GO:0090626	plant epidermis morphogenesis	None	Extended
BP	GO:0090698	post-embryonic plant morphogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901606	alpha-amino acid catabolic process	None	Extended
BP	GO:1902680	positive regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1905392	plant organ morphogenesis	None	Extended
BP	GO:2000377	regulation of reactive oxygen species metabolic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000023	maltose metabolic process	IEP	HCCA
BP	GO:0000097	sulfur amino acid biosynthetic process	IEP	HCCA
BP	GO:0000271	polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	HCCA
BP	GO:0001101	response to acid chemical	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003727	single-stranded RNA binding	IEP	HCCA
MF	GO:0003729	mRNA binding	IEP	HCCA
MF	GO:0003959	NADPH dehydrogenase activity	IEP	HCCA
MF	GO:0004356	glutamate-ammonia ligase activity	IEP	HCCA
MF	GO:0004365	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	IEP	HCCA
MF	GO:0004372	glycine hydroxymethyltransferase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0005527	macrolide binding	IEP	HCCA
MF	GO:0005528	FK506 binding	IEP	HCCA
CC	GO:0005694	chromosome	IEP	HCCA
CC	GO:0005759	mitochondrial matrix	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0005976	polysaccharide metabolic process	IEP	HCCA
BP	GO:0005982	starch metabolic process	IEP	HCCA
BP	GO:0005984	disaccharide metabolic process	IEP	HCCA
BP	GO:0005985	sucrose metabolic process	IEP	HCCA
BP	GO:0005996	monosaccharide metabolic process	IEP	HCCA
BP	GO:0006000	fructose metabolic process	IEP	HCCA
BP	GO:0006073	cellular glucan metabolic process	IEP	HCCA
BP	GO:0006096	glycolytic process	IEP	HCCA
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006417	regulation of translation	IEP	HCCA
BP	GO:0006534	cysteine metabolic process	IEP	HCCA
BP	GO:0006536	glutamate metabolic process	IEP	HCCA
BP	GO:0006541	glutamine metabolic process	IEP	HCCA
BP	GO:0006563	L-serine metabolic process	IEP	HCCA
BP	GO:0006757	ATP generation from ADP	IEP	HCCA
BP	GO:0006950	response to stress	IEP	HCCA
BP	GO:0006952	defense response	IEP	HCCA
BP	GO:0007154	cell communication	IEP	HCCA
BP	GO:0007568	aging	IEP	HCCA
BP	GO:0007623	circadian rhythm	IEP	HCCA
MF	GO:0008047	enzyme activator activity	IEP	HCCA
MF	GO:0008187	poly-pyrimidine tract binding	IEP	HCCA
MF	GO:0008266	poly(U) RNA binding	IEP	HCCA
MF	GO:0008465	glycerate dehydrogenase activity	IEP	HCCA
MF	GO:0008967	phosphoglycolate phosphatase activity	IEP	HCCA
MF	GO:0008974	phosphoribulokinase activity	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	HCCA
BP	GO:0009070	serine family amino acid biosynthetic process	IEP	HCCA
BP	GO:0009073	aromatic amino acid family biosynthetic process	IEP	HCCA
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009250	glucan biosynthetic process	IEP	HCCA
BP	GO:0009266	response to temperature stimulus	IEP	HCCA
CC	GO:0009295	nucleoid	IEP	HCCA
BP	GO:0009311	oligosaccharide metabolic process	IEP	HCCA
BP	GO:0009409	response to cold	IEP	HCCA
BP	GO:0009414	response to water deprivation	IEP	HCCA
BP	GO:0009415	response to water	IEP	HCCA
CC	GO:0009508	plastid chromosome	IEP	HCCA
CC	GO:0009512	cytochrome b6f complex	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009522	photosystem I	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009532	plastid stroma	IEP	HCCA
CC	GO:0009534	chloroplast thylakoid	IEP	HCCA
CC	GO:0009535	chloroplast thylakoid membrane	IEP	HCCA
CC	GO:0009543	chloroplast thylakoid lumen	IEP	HCCA
CC	GO:0009570	chloroplast stroma	IEP	HCCA
CC	GO:0009579	thylakoid	IEP	HCCA
BP	GO:0009595	detection of biotic stimulus	IEP	HCCA
BP	GO:0009620	response to fungus	IEP	HCCA
BP	GO:0009626	plant-type hypersensitive response	IEP	HCCA
BP	GO:0009637	response to blue light	IEP	HCCA
BP	GO:0009639	response to red or far red light	IEP	HCCA
BP	GO:0009642	response to light intensity	IEP	HCCA
BP	GO:0009644	response to high light intensity	IEP	HCCA
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	HCCA
BP	GO:0009668	plastid membrane organization	IEP	HCCA
BP	GO:0009696	salicylic acid metabolic process	IEP	HCCA
BP	GO:0009697	salicylic acid biosynthetic process	IEP	HCCA
BP	GO:0009743	response to carbohydrate	IEP	HCCA
BP	GO:0009744	response to sucrose	IEP	HCCA
BP	GO:0009746	response to hexose	IEP	HCCA
BP	GO:0009749	response to glucose	IEP	HCCA
BP	GO:0009765	photosynthesis, light harvesting	IEP	HCCA
BP	GO:0009767	photosynthetic electron transport chain	IEP	HCCA
BP	GO:0009768	photosynthesis, light harvesting in photosystem I	IEP	HCCA
BP	GO:0009773	photosynthetic electron transport in photosystem I	IEP	HCCA
CC	GO:0009782	photosystem I antenna complex	IEP	HCCA
BP	GO:0009854	oxidative photosynthetic carbon pathway	IEP	HCCA
BP	GO:0009991	response to extracellular stimulus	IEP	HCCA
BP	GO:0010027	thylakoid membrane organization	IEP	HCCA
BP	GO:0010035	response to inorganic substance	IEP	HCCA
BP	GO:0010038	response to metal ion	IEP	HCCA
BP	GO:0010114	response to red light	IEP	HCCA
BP	GO:0010155	regulation of proton transport	IEP	HCCA
BP	GO:0010196	nonphotochemical quenching	IEP	HCCA
BP	GO:0010200	response to chitin	IEP	HCCA
BP	GO:0010218	response to far red light	IEP	HCCA
BP	GO:0010243	response to organonitrogen compound	IEP	HCCA
CC	GO:0010287	plastoglobule	IEP	HCCA
CC	GO:0010319	stromule	IEP	HCCA
CC	GO:0010598	NAD(P)H dehydrogenase complex (plastoquinone)	IEP	HCCA
BP	GO:0010608	post-transcriptional regulation of gene expression	IEP	HCCA
BP	GO:0010628	positive regulation of gene expression	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
BP	GO:0016051	carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0016052	carbohydrate catabolic process	IEP	HCCA
MF	GO:0016211	ammonia ligase activity	IEP	HCCA
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016742	hydroxymethyl-, formyl- and related transferase activity	IEP	HCCA
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	HCCA
MF	GO:0016791	phosphatase activity	IEP	HCCA
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	HCCA
MF	GO:0016880	acid-ammonia (or amide) ligase activity	IEP	HCCA
BP	GO:0017014	protein nitrosylation	IEP	HCCA
BP	GO:0017148	negative regulation of translation	IEP	HCCA
BP	GO:0018119	peptidyl-cysteine S-nitrosylation	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018198	peptidyl-cysteine modification	IEP	HCCA
BP	GO:0018208	peptidyl-proline modification	IEP	HCCA
BP	GO:0018958	phenol-containing compound metabolic process	IEP	HCCA
MF	GO:0019203	carbohydrate phosphatase activity	IEP	HCCA
BP	GO:0019252	starch biosynthetic process	IEP	HCCA
BP	GO:0019253	reductive pentose-phosphate cycle	IEP	HCCA
BP	GO:0019344	cysteine biosynthetic process	IEP	HCCA
BP	GO:0019464	glycine decarboxylation via glycine cleavage system	IEP	HCCA
BP	GO:0019676	ammonia assimilation cycle	IEP	HCCA
BP	GO:0019684	photosynthesis, light reaction	IEP	HCCA
BP	GO:0019685	photosynthesis, dark reaction	IEP	HCCA
BP	GO:0019740	nitrogen utilization	IEP	HCCA
BP	GO:0019757	glycosinolate metabolic process	IEP	HCCA
BP	GO:0019758	glycosinolate biosynthetic process	IEP	HCCA
BP	GO:0019760	glucosinolate metabolic process	IEP	HCCA
BP	GO:0019761	glucosinolate biosynthetic process	IEP	HCCA
CC	GO:0019867	outer membrane	IEP	HCCA
CC	GO:0022626	cytosolic ribosome	IEP	HCCA
BP	GO:0022900	electron transport chain	IEP	HCCA
CC	GO:0030076	light-harvesting complex	IEP	HCCA
CC	GO:0030093	chloroplast photosystem I	IEP	HCCA
CC	GO:0030095	chloroplast photosystem II	IEP	HCCA
BP	GO:0030388	fructose 1,6-bisphosphate metabolic process	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
MF	GO:0031409	pigment binding	IEP	HCCA
BP	GO:0031668	cellular response to extracellular stimulus	IEP	HCCA
CC	GO:0031968	organelle outer membrane	IEP	HCCA
CC	GO:0031976	plastid thylakoid	IEP	HCCA
CC	GO:0031977	thylakoid lumen	IEP	HCCA
CC	GO:0031978	plastid thylakoid lumen	IEP	HCCA
BP	GO:0032544	plastid translation	IEP	HCCA
BP	GO:0032879	regulation of localization	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
MF	GO:0033218	amide binding	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0033993	response to lipid	IEP	HCCA
BP	GO:0034050	programmed cell death induced by symbiont	IEP	HCCA
BP	GO:0034248	regulation of amide metabolic process	IEP	HCCA
BP	GO:0034249	negative regulation of amide metabolic process	IEP	HCCA
BP	GO:0034250	positive regulation of amide metabolic process	IEP	HCCA
BP	GO:0034284	response to monosaccharide	IEP	HCCA
BP	GO:0034285	response to disaccharide	IEP	HCCA
CC	GO:0034357	photosynthetic membrane	IEP	HCCA
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:0034762	regulation of transmembrane transport	IEP	HCCA
BP	GO:0034765	regulation of monoatomic ion transmembrane transport	IEP	HCCA
MF	GO:0042132	fructose 1,6-bisphosphate 1-phosphatase activity	IEP	HCCA
CC	GO:0042170	plastid membrane	IEP	HCCA
BP	GO:0042537	benzene-containing compound metabolic process	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA
BP	GO:0042592	homeostatic process	IEP	HCCA
BP	GO:0042631	cellular response to water deprivation	IEP	HCCA
CC	GO:0042651	thylakoid membrane	IEP	HCCA
BP	GO:0042742	defense response to bacterium	IEP	HCCA
BP	GO:0042743	hydrogen peroxide metabolic process	IEP	HCCA
BP	GO:0042744	hydrogen peroxide catabolic process	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0043269	regulation of monoatomic ion transport	IEP	HCCA
MF	GO:0043531	ADP binding	IEP	HCCA
BP	GO:0043648	dicarboxylic acid metabolic process	IEP	HCCA
MF	GO:0043891	glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity	IEP	HCCA
BP	GO:0043900	obsolete regulation of multi-organism process	IEP	HCCA
BP	GO:0044042	glucan metabolic process	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	HCCA
BP	GO:0044403	biological process involved in symbiotic interaction	IEP	HCCA
BP	GO:0044550	secondary metabolite biosynthetic process	IEP	HCCA
MF	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	IEP	HCCA
MF	GO:0045157	electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity	IEP	HCCA
BP	GO:0045727	positive regulation of translation	IEP	HCCA
MF	GO:0046028	electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity	IEP	HCCA
BP	GO:0046031	ADP metabolic process	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0046189	phenol-containing compound biosynthetic process	IEP	HCCA
BP	GO:0046686	response to cadmium ion	IEP	HCCA
BP	GO:0046688	response to copper ion	IEP	HCCA
MF	GO:0046863	ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity	IEP	HCCA
BP	GO:0046939	nucleotide phosphorylation	IEP	HCCA
MF	GO:0047100	glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	IEP	HCCA
BP	GO:0048511	rhythmic process	IEP	HCCA
BP	GO:0048878	chemical homeostasis	IEP	HCCA
MF	GO:0050308	sugar-phosphatase activity	IEP	HCCA
BP	GO:0050665	hydrogen peroxide biosynthetic process	IEP	HCCA
BP	GO:0050801	monoatomic ion homeostasis	IEP	HCCA
BP	GO:0050832	defense response to fungus	IEP	HCCA
BP	GO:0051049	regulation of transport	IEP	HCCA
BP	GO:0051247	positive regulation of protein metabolic process	IEP	HCCA
BP	GO:0051606	detection of stimulus	IEP	HCCA
BP	GO:0051702	biological process involved in interaction with symbiont	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
CC	GO:0055035	plastid thylakoid membrane	IEP	HCCA
BP	GO:0055070	copper ion homeostasis	IEP	HCCA
BP	GO:0055080	monoatomic cation homeostasis	IEP	HCCA
BP	GO:0055114	obsolete oxidation-reduction process	IEP	HCCA
BP	GO:0061024	membrane organization	IEP	HCCA
CC	GO:0070069	cytochrome complex	IEP	HCCA
BP	GO:0070887	cellular response to chemical stimulus	IEP	HCCA
BP	GO:0071214	cellular response to abiotic stimulus	IEP	HCCA
BP	GO:0071229	cellular response to acid chemical	IEP	HCCA
BP	GO:0071462	cellular response to water stimulus	IEP	HCCA
BP	GO:0071496	cellular response to external stimulus	IEP	HCCA
BP	GO:0072593	reactive oxygen species metabolic process	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
BP	GO:0098542	defense response to other organism	IEP	HCCA
CC	GO:0098588	bounding membrane of organelle	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0098807	chloroplast thylakoid membrane protein complex	IEP	HCCA
BP	GO:0104004	cellular response to environmental stimulus	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	HCCA
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	HCCA
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	HCCA
BP	GO:1901698	response to nitrogen compound	IEP	HCCA
BP	GO:1901700	response to oxygen-containing compound	IEP	HCCA
BP	GO:1901701	cellular response to oxygen-containing compound	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
BP	GO:1903409	reactive oxygen species biosynthetic process	IEP	HCCA
BP	GO:1904062	regulation of monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:1990066	energy quenching	IEP	HCCA
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:2000113	negative regulation of cellular macromolecule biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR022383	Lactate/malate_DH_C	188	351
IPR001236	Lactate/malate_DH_N	44	186

External Links

No external refs found!

AT5G09660 (PMDH2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation