AT5G01400 (ESP4)

Aliases : ESP4

Description : HEAT repeat-containing protein

Gene families : OG0002204 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002204_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G01400

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00088050	ESP4,...	RNA processing.RNA 3-end polyadenylation.Cleavage and...	0.13	OrthoFinder output from all 47 species
Adi_g081403	No alias	component *(Symplekin/Pta1) of Cleavage and...	0.04	OrthoFinder output from all 47 species
Aev_g04192	No alias	component *(Symplekin/Pta1) of Cleavage and...	0.03	OrthoFinder output from all 47 species
Ala_g04252	No alias	component *(Symplekin/Pta1) of Cleavage and...	0.1	OrthoFinder output from all 47 species
Ala_g06408	ESP4	component *(Symplekin/Pta1) of Cleavage and...	0.05	OrthoFinder output from all 47 species
Als_g09476	ESP4	component *(Symplekin/Pta1) of Cleavage and...	0.04	OrthoFinder output from all 47 species
Als_g23718	No alias	component *(Symplekin/Pta1) of Cleavage and...	0.08	OrthoFinder output from all 47 species
Als_g63126	ESP4	component *(Symplekin/Pta1) of Cleavage and...	0.06	OrthoFinder output from all 47 species
Aop_g08267	ESP4	component *(Symplekin/Pta1) of Cleavage and...	0.03	OrthoFinder output from all 47 species
Aop_g22132	No alias	component *(Symplekin/Pta1) of Cleavage and...	0.06	OrthoFinder output from all 47 species
Aspi01Gene50297.t1	Aspi01Gene50297	component *(Symplekin/Pta1) of Cleavage and...	0.07	OrthoFinder output from all 47 species
Aspi01Gene50301.t1	ESP4, Aspi01Gene50301	component *(Symplekin/Pta1) of Cleavage and...	0.03	OrthoFinder output from all 47 species
Azfi_s0003.g007850	No alias	component *(Symplekin/Pta1) of Cleavage and...	0.05	OrthoFinder output from all 47 species
Azfi_s0006.g010125	ESP4	component *(Symplekin/Pta1) of Cleavage and...	0.03	OrthoFinder output from all 47 species
Cba_g05336	No alias	component *(Symplekin/Pta1) of Cleavage and...	0.03	OrthoFinder output from all 47 species
Cba_g36378	No alias	component *(Symplekin/Pta1) of Cleavage and...	0.02	OrthoFinder output from all 47 species
Ceric.01G050700.1	Ceric.01G050700	component *(Symplekin/Pta1) of Cleavage and...	0.08	OrthoFinder output from all 47 species
Ceric.12G019100.1	ESP4, Ceric.12G019100	component *(Symplekin/Pta1) of Cleavage and...	0.07	OrthoFinder output from all 47 species
Dac_g01061	ESP4	component *(Symplekin/Pta1) of Cleavage and...	0.03	OrthoFinder output from all 47 species
Dac_g06615	No alias	component *(Symplekin/Pta1) of Cleavage and...	0.02	OrthoFinder output from all 47 species
Dcu_g02040	No alias	component *(Symplekin/Pta1) of Cleavage and...	0.09	OrthoFinder output from all 47 species
Dde_g04949	ESP4	component *(Symplekin/Pta1) of Cleavage and...	0.06	OrthoFinder output from all 47 species
Ehy_g19241	ESP4	component *(Symplekin/Pta1) of Cleavage and...	0.02	OrthoFinder output from all 47 species
Ehy_g21797	No alias	component *(Symplekin/Pta1) of Cleavage and...	0.02	OrthoFinder output from all 47 species
GSVIVT01009243001	No alias	RNA processing.RNA 3-end polyadenylation.Cleavage and...	0.04	OrthoFinder output from all 47 species
GSVIVT01009244001	No alias	RNA processing.RNA 3-end polyadenylation.Cleavage and...	0.06	OrthoFinder output from all 47 species
GSVIVT01011157001	ESP4	RNA processing.RNA 3-end polyadenylation.Cleavage and...	0.09	OrthoFinder output from all 47 species
Gb_23976	ESP4	component Symplekin/Pta1 of Cleavage and Polyadenylation...	0.05	OrthoFinder output from all 47 species
Gb_24672	No alias	component Symplekin/Pta1 of Cleavage and Polyadenylation...	0.13	OrthoFinder output from all 47 species
LOC_Os01g49940.1	LOC_Os01g49940	component Symplekin/Pta1 of Cleavage and Polyadenylation...	0.13	OrthoFinder output from all 47 species
LOC_Os07g49320.1	ESP4, LOC_Os07g49320	component Symplekin/Pta1 of Cleavage and Polyadenylation...	0.09	OrthoFinder output from all 47 species
Len_g14162	ESP4	component *(Symplekin/Pta1) of Cleavage and...	0.05	OrthoFinder output from all 47 species
Lfl_g06265	No alias	component *(Symplekin/Pta1) of Cleavage and...	0.08	OrthoFinder output from all 47 species
MA_10426054g0010	No alias	component Symplekin/Pta1 of Cleavage and Polyadenylation...	0.05	OrthoFinder output from all 47 species
MA_10426054g0020	ESP4	component Symplekin/Pta1 of Cleavage and Polyadenylation...	0.08	OrthoFinder output from all 47 species
MA_10430259g0010	No alias	component Symplekin/Pta1 of Cleavage and Polyadenylation...	0.06	OrthoFinder output from all 47 species
MA_10432378g0010	No alias	component Symplekin/Pta1 of Cleavage and Polyadenylation...	0.14	OrthoFinder output from all 47 species
Msp_g14027	No alias	component *(Symplekin/Pta1) of Cleavage and...	0.08	OrthoFinder output from all 47 species
Msp_g24896	ESP4	component *(Symplekin/Pta1) of Cleavage and...	0.05	OrthoFinder output from all 47 species
Ore_g27266	No alias	component *(Symplekin/Pta1) of Cleavage and...	0.07	OrthoFinder output from all 47 species
Pir_g03429	ESP4	component *(Symplekin/Pta1) of Cleavage and...	0.03	OrthoFinder output from all 47 species
Ppi_g15043	ESP4	component *(Symplekin/Pta1) of Cleavage and...	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0168.g024262	No alias	component *(Symplekin/Pta1) of Cleavage and...	0.08	OrthoFinder output from all 47 species
Sacu_v1.1_s0240.g026617	No alias	component *(Symplekin/Pta1) of Cleavage and...	0.04	OrthoFinder output from all 47 species
Sam_g08972	No alias	component *(Symplekin/Pta1) of Cleavage and...	0.06	OrthoFinder output from all 47 species
Sam_g17991	No alias	component *(Symplekin/Pta1) of Cleavage and...	0.03	OrthoFinder output from all 47 species
Smo442688	ESP4	RNA processing.RNA 3-end polyadenylation.Cleavage and...	0.06	OrthoFinder output from all 47 species
Solyc04g076900.2.1	Solyc04g076900	component Symplekin/Pta1 of Cleavage and Polyadenylation...	0.09	OrthoFinder output from all 47 species
Solyc04g076910.3.1	Solyc04g076910	component Symplekin/Pta1 of Cleavage and Polyadenylation...	0.12	OrthoFinder output from all 47 species
Solyc09g005330.3.1	ESP4, Solyc09g005330	component Symplekin/Pta1 of Cleavage and Polyadenylation...	0.07	OrthoFinder output from all 47 species
Spa_g15317	ESP4	component *(Symplekin/Pta1) of Cleavage and...	0.03	OrthoFinder output from all 47 species
Spa_g18107	No alias	component *(Symplekin/Pta1) of Cleavage and...	0.06	OrthoFinder output from all 47 species
Tin_g03552	No alias	component *(Symplekin/Pta1) of Cleavage and...	0.02	OrthoFinder output from all 47 species
Tin_g06134	ESP4	component *(Symplekin/Pta1) of Cleavage and...	0.03	OrthoFinder output from all 47 species
Zm00001e020082_P004	Zm00001e020082	component Symplekin/Pta1 of Cleavage and Polyadenylation...	0.18	OrthoFinder output from all 47 species
Zm00001e035946_P001	ESP4, Zm00001e035946	component Symplekin/Pta1 of Cleavage and Polyadenylation...	0.07	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005847	mRNA cleavage and polyadenylation specificity factor complex	NAS	Interproscan
CC	GO:0005849	mRNA cleavage factor complex	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	IMP	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010608	post-transcriptional regulation of gene expression	None	Extended
BP	GO:0010629	negative regulation of gene expression	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016441	post-transcriptional gene silencing	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031047	RNA-mediated gene silencing	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0035194	RNA-mediated post-transcriptional gene silencing	IMP	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000059	obsolete protein import into nucleus, docking	IEP	HCCA
CC	GO:0000145	exocyst	IEP	HCCA
BP	GO:0000902	cell morphogenesis	IEP	HCCA
BP	GO:0000904	cell morphogenesis involved in differentiation	IEP	HCCA
BP	GO:0001708	cell fate specification	IEP	HCCA
BP	GO:0003006	developmental process involved in reproduction	IEP	HCCA
MF	GO:0003712	transcription coregulator activity	IEP	HCCA
MF	GO:0004197	cysteine-type endopeptidase activity	IEP	HCCA
MF	GO:0004402	histone acetyltransferase activity	IEP	HCCA
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
CC	GO:0005643	nuclear pore	IEP	HCCA
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	HCCA
BP	GO:0006473	protein acetylation	IEP	HCCA
BP	GO:0006486	protein glycosylation	IEP	HCCA
BP	GO:0007015	actin filament organization	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007155	cell adhesion	IEP	HCCA
BP	GO:0007275	multicellular organism development	IEP	HCCA
BP	GO:0007389	pattern specification process	IEP	HCCA
MF	GO:0008080	N-acetyltransferase activity	IEP	HCCA
MF	GO:0008565	obsolete protein transporter activity	IEP	HCCA
BP	GO:0009292	horizontal gene transfer	IEP	HCCA
BP	GO:0009294	DNA-mediated transformation	IEP	HCCA
BP	GO:0009561	megagametogenesis	IEP	HCCA
BP	GO:0009653	anatomical structure morphogenesis	IEP	HCCA
BP	GO:0009790	embryo development	IEP	HCCA
BP	GO:0009793	embryo development ending in seed dormancy	IEP	HCCA
BP	GO:0009846	pollen germination	IEP	HCCA
BP	GO:0009880	embryonic pattern specification	IEP	HCCA
BP	GO:0009908	flower development	IEP	HCCA
BP	GO:0009910	negative regulation of flower development	IEP	HCCA
BP	GO:0010053	root epidermal cell differentiation	IEP	HCCA
BP	GO:0010072	primary shoot apical meristem specification	IEP	HCCA
BP	GO:0010090	trichome morphogenesis	IEP	HCCA
BP	GO:0010191	mucilage metabolic process	IEP	HCCA
BP	GO:0010192	mucilage biosynthetic process	IEP	HCCA
BP	GO:0010228	vegetative to reproductive phase transition of meristem	IEP	HCCA
BP	GO:0010393	galacturonan metabolic process	IEP	HCCA
BP	GO:0010431	seed maturation	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
MF	GO:0016407	acetyltransferase activity	IEP	HCCA
MF	GO:0016410	N-acyltransferase activity	IEP	HCCA
CC	GO:0016514	SWI/SNF complex	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
BP	GO:0016926	protein desumoylation	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018205	peptidyl-lysine modification	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
BP	GO:0021700	developmental maturation	IEP	HCCA
BP	GO:0022414	reproductive process	IEP	HCCA
BP	GO:0030154	cell differentiation	IEP	HCCA
MF	GO:0030695	GTPase regulator activity	IEP	HCCA
BP	GO:0032501	multicellular organismal process	IEP	HCCA
BP	GO:0032502	developmental process	IEP	HCCA
BP	GO:0033043	regulation of organelle organization	IEP	HCCA
MF	GO:0034212	peptide N-acetyltransferase activity	IEP	HCCA
BP	GO:0034406	cell wall beta-glucan metabolic process	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0040014	regulation of multicellular organism growth	IEP	HCCA
BP	GO:0040034	regulation of development, heterochronic	IEP	HCCA
BP	GO:0042743	hydrogen peroxide metabolic process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
BP	GO:0043543	protein acylation	IEP	HCCA
BP	GO:0045010	actin nucleation	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
BP	GO:0045488	pectin metabolic process	IEP	HCCA
BP	GO:0045595	regulation of cell differentiation	IEP	HCCA
BP	GO:0048354	mucilage biosynthetic process involved in seed coat development	IEP	HCCA
BP	GO:0048359	mucilage metabolic process involved in seed coat development	IEP	HCCA
BP	GO:0048367	shoot system development	IEP	HCCA
BP	GO:0048441	petal development	IEP	HCCA
BP	GO:0048469	cell maturation	IEP	HCCA
BP	GO:0048608	reproductive structure development	IEP	HCCA
BP	GO:0048731	system development	IEP	HCCA
BP	GO:0048764	trichoblast maturation	IEP	HCCA
BP	GO:0048765	root hair cell differentiation	IEP	HCCA
BP	GO:0048856	anatomical structure development	IEP	HCCA
BP	GO:0048869	cellular developmental process	IEP	HCCA
BP	GO:0050665	hydrogen peroxide biosynthetic process	IEP	HCCA
BP	GO:0050790	regulation of catalytic activity	IEP	HCCA
BP	GO:0050793	regulation of developmental process	IEP	HCCA
BP	GO:0051128	regulation of cellular component organization	IEP	HCCA
BP	GO:0051239	regulation of multicellular organismal process	IEP	HCCA
BP	GO:0052541	plant-type cell wall cellulose metabolic process	IEP	HCCA
BP	GO:0052546	cell wall pectin metabolic process	IEP	HCCA
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	HCCA
MF	GO:0061733	peptide-lysine-N-acetyltransferase activity	IEP	HCCA
BP	GO:0065009	regulation of molecular function	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA
CC	GO:0070603	SWI/SNF superfamily-type complex	IEP	HCCA
BP	GO:0070646	protein modification by small protein removal	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071555	cell wall organization	IEP	HCCA
BP	GO:0071695	anatomical structure maturation	IEP	HCCA
BP	GO:0072593	reactive oxygen species metabolic process	IEP	HCCA
BP	GO:0090213	regulation of radial pattern formation	IEP	HCCA
BP	GO:0090421	embryonic meristem initiation	IEP	HCCA
BP	GO:0090567	reproductive shoot system development	IEP	HCCA
BP	GO:0090627	plant epidermal cell differentiation	IEP	HCCA
BP	GO:0097435	supramolecular fiber organization	IEP	HCCA
CC	GO:0099023	vesicle tethering complex	IEP	HCCA
MF	GO:0140677	molecular function activator activity	IEP	HCCA
BP	GO:1903409	reactive oxygen species biosynthetic process	IEP	HCCA
CC	GO:1904949	ATPase complex	IEP	HCCA
BP	GO:2000242	negative regulation of reproductive process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR032460	Symplekin/Pta1_N	96	289
IPR022075	Symplekin_C	1033	1211

External Links

No external refs found!

AT5G01400 (ESP4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation