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  5. AT4G39960

AT4G39960


Description : Molecular chaperone Hsp40/DnaJ family protein


Gene families : OG0000947 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000947_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G39960
Cluster HCCA: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00070p00046580 evm_27.TU.AmTr_v1... Chaperone protein dnaJ A7A, chloroplastic OS=Oryza... 0.03 OrthoFinder output from all 47 species
Adi_g058767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g079838 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g05460 No alias co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g28745 No alias co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g01848 No alias co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06509 No alias co-chaperone *(Hsp40) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g13916 No alias co-chaperone *(Hsp40) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0021.g015591 No alias co-chaperone *(Hsp40) & original description: CDS=120-1841 0.07 OrthoFinder output from all 47 species
Cba_g12870 No alias co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G098500.1 Ceric.04G098500 co-chaperone *(Hsp40) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.05G065700.1 Ceric.05G065700 co-chaperone *(Hsp40) & original description:... 0.06 OrthoFinder output from all 47 species
Dcu_g09427 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09956 No alias co-chaperone *(Hsp40) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g10357 No alias co-chaperone *(Hsp40) & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g02188 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13242 No alias co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01017355001 No alias Chaperone protein dnaJ A7A, chloroplastic OS=Oryza... 0.08 OrthoFinder output from all 47 species
Gb_03413 No alias co-chaperone (Hsp40) 0.04 OrthoFinder output from all 47 species
LOC_Os02g56040.1 LOC_Os02g56040 co-chaperone (Hsp40) 0.1 OrthoFinder output from all 47 species
Len_g01253 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12788 No alias co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g49274 No alias co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g12022 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10434645g0010 No alias co-chaperone (Hsp40) 0.03 OrthoFinder output from all 47 species
MA_91734g0010 No alias Chaperone protein dnaJ A7A, chloroplastic OS=Oryza... 0.03 OrthoFinder output from all 47 species
Mp8g17710.1 No alias co-chaperone (Hsp40) 0.09 OrthoFinder output from all 47 species
Nbi_g09958 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18499 No alias co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19859 No alias co-chaperone *(Hsp40) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g25863 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33115 No alias co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12500 No alias co-chaperone *(Hsp40) & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g13555 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14679 No alias co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002636 No alias co-chaperone *(Hsp40) & original description: CDS=1-894 0.03 OrthoFinder output from all 47 species
Sam_g17684 No alias co-chaperone *(Hsp40) & original description: none 0.05 OrthoFinder output from all 47 species
Smo271998 No alias Chaperone protein dnaJ A7A, chloroplastic OS=Oryza... 0.05 OrthoFinder output from all 47 species
Smo430412 No alias Chaperone protein dnaJ A7A, chloroplastic OS=Oryza... 0.03 OrthoFinder output from all 47 species
Spa_g08504 No alias co-chaperone *(Hsp40) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g10094 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02021 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0006457 protein folding ISS Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009535 chloroplast thylakoid membrane IDA Interproscan
CC GO:0009941 chloroplast envelope IDA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000741 karyogamy IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004817 cysteine-tRNA ligase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006423 cysteinyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0006997 nucleus organization IEP HCCA
BP GO:0007005 mitochondrion organization IEP HCCA
BP GO:0007006 mitochondrial membrane organization IEP HCCA
BP GO:0007007 inner mitochondrial membrane organization IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP HCCA
CC GO:0009532 plastid stroma IEP HCCA
CC GO:0009534 chloroplast thylakoid IEP HCCA
CC GO:0009543 chloroplast thylakoid lumen IEP HCCA
CC GO:0009570 chloroplast stroma IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
BP GO:0009657 plastid organization IEP HCCA
BP GO:0009658 chloroplast organization IEP HCCA
BP GO:0009668 plastid membrane organization IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
BP GO:0009772 photosynthetic electron transport in photosystem II IEP HCCA
BP GO:0009902 chloroplast relocation IEP HCCA
BP GO:0010027 thylakoid membrane organization IEP HCCA
BP GO:0010103 stomatal complex morphogenesis IEP HCCA
BP GO:0010197 polar nucleus fusion IEP HCCA
BP GO:0010267 ta-siRNA processing IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0016556 mRNA modification IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0017038 protein import IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP HCCA
BP GO:0019750 chloroplast localization IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0030422 siRNA processing IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
CC GO:0031976 plastid thylakoid IEP HCCA
CC GO:0031977 thylakoid lumen IEP HCCA
CC GO:0031978 plastid thylakoid lumen IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0035196 miRNA processing IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042407 cristae formation IEP HCCA
BP GO:0042793 plastid transcription IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044743 protein transmembrane import into intracellular organelle IEP HCCA
BP GO:0045036 protein targeting to chloroplast IEP HCCA
BP GO:0045038 protein import into chloroplast thylakoid membrane IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046490 isopentenyl diphosphate metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048284 organelle fusion IEP HCCA
BP GO:0048481 plant ovule development IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051607 defense response to virus IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051644 plastid localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051656 establishment of organelle localization IEP HCCA
BP GO:0051667 establishment of plastid localization IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0065002 intracellular protein transmembrane transport IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070918 regulatory ncRNA processing IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0071806 protein transmembrane transport IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072596 establishment of protein localization to chloroplast IEP HCCA
BP GO:0072598 protein localization to chloroplast IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:0090626 plant epidermis morphogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:0140546 defense response to symbiont IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001305 HSP_DnaJ_Cys-rich_dom 230 293
IPR002939 DnaJ_C 205 420
IPR001623 DnaJ_domain 85 146
No external refs found!