AT4G28750 (PSAE-1)


Aliases : PSAE-1

Description : Photosystem I reaction centre subunit IV / PsaE protein


Gene families : OG0002928 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002928_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G28750
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00131500 PSAE-1,... Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.22 OrthoFinder output from all 47 species
Adi_g024208 PSAE-2 component *(PsaE) of PS-I complex & original description: none 0.22 OrthoFinder output from all 47 species
Adi_g025743 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aev_g41037 PSAE-2 component *(PsaE) of PS-I complex & original description: none 0.15 OrthoFinder output from all 47 species
Ala_g23025 PSAE-2 component *(PsaE) of PS-I complex & original description: none 0.21 OrthoFinder output from all 47 species
Als_g03364 PSAE-1 component *(PsaE) of PS-I complex & original description: none 0.17 OrthoFinder output from all 47 species
Als_g05876 PSAE-2 component *(PsaE) of PS-I complex & original description: none 0.14 OrthoFinder output from all 47 species
Aob_g13796 PSAE-2 component *(PsaE) of PS-I complex & original description: none 0.11 OrthoFinder output from all 47 species
Aob_g19373 PSAE-2 component *(PsaE) of PS-I complex & original description: none 0.11 OrthoFinder output from all 47 species
Aob_g38967 PSAE-2 component *(PsaE) of PS-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g43151 No alias component *(PsaE) of PS-I complex & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g09355 PSAE-2 component *(PsaE) of PS-I complex & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g10172 PSAE-1 component *(PsaE) of PS-I complex & original description: none 0.14 OrthoFinder output from all 47 species
Aspi01Gene58548.t1 PSAE-2, Aspi01Gene58548 component *(PsaE) of PS-I complex & original description: none 0.1 OrthoFinder output from all 47 species
Azfi_s0067.g036151 PSAE-2 component *(PsaE) of PS-I complex & original... 0.09 OrthoFinder output from all 47 species
Cba_g34861 PSAE-2 component *(PsaE) of PS-I complex & original description: none 0.09 OrthoFinder output from all 47 species
Ceric.02G048500.1 PSAE-2, Ceric.02G048500 component *(PsaE) of PS-I complex & original... 0.24 OrthoFinder output from all 47 species
Ceric.27G025300.1 PSAE-2, Ceric.27G025300 component *(PsaE) of PS-I complex & original... 0.16 OrthoFinder output from all 47 species
Cre10.g420350 No alias Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.29 OrthoFinder output from all 47 species
Dac_g00144 PSAE-2 component *(PsaE) of PS-I complex & original description: none 0.11 OrthoFinder output from all 47 species
Dac_g09167 PSAE-1 component *(PsaE) of PS-I complex & original description: none 0.16 OrthoFinder output from all 47 species
Dcu_g51505 PSAE-1 component *(PsaE) of PS-I complex & original description: none 0.4 OrthoFinder output from all 47 species
Dde_g21947 PSAE-2 component *(PsaE) of PS-I complex & original description: none 0.16 OrthoFinder output from all 47 species
Ehy_g00165 PSAE-2 component *(PsaE) of PS-I complex & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g16182 PSAE-2 component *(PsaE) of PS-I complex & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01028481001 PSAE-2 Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.22 OrthoFinder output from all 47 species
Gb_21826 PSAE-2 component PsaE of PS-I complex 0.17 OrthoFinder output from all 47 species
LOC_Os07g25430.1 PSAE-2, LOC_Os07g25430 component PsaE of PS-I complex 0.28 OrthoFinder output from all 47 species
Len_g12059 PSAE-2 component *(PsaE) of PS-I complex & original description: none 0.13 OrthoFinder output from all 47 species
Len_g13610 PSAE-2 component *(PsaE) of PS-I complex & original description: none 0.1 OrthoFinder output from all 47 species
Mp1g24020.1 PSAE-2 component PsaE of PS-I complex 0.34 OrthoFinder output from all 47 species
Msp_g05545 PSAE-2 component *(PsaE) of PS-I complex & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g11190 PSAE-2 component *(PsaE) of PS-I complex & original description: none 0.12 OrthoFinder output from all 47 species
Nbi_g03988 PSAE-2 component *(PsaE) of PS-I complex & original description: none 0.09 OrthoFinder output from all 47 species
Nbi_g06885 PSAE-1 component *(PsaE) of PS-I complex & original description: none 0.11 OrthoFinder output from all 47 species
Ore_g09411 PSAE-2 component *(PsaE) of PS-I complex & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g14801 PSAE-2 component *(PsaE) of PS-I complex & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g35945 PSAE-2 component *(PsaE) of PS-I complex & original description: none 0.13 OrthoFinder output from all 47 species
Pir_g11909 PSAE-2 component *(PsaE) of PS-I complex & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g17558 PSAE-2 component *(PsaE) of PS-I complex & original description: none 0.15 OrthoFinder output from all 47 species
Pnu_g06145 PSAE-2 component *(PsaE) of PS-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c23_22230V3.1 PSAE-1, Pp3c23_22230 photosystem I subunit E-2 0.11 OrthoFinder output from all 47 species
Pp3c24_20960V3.1 Pp3c24_20960 photosystem I subunit E-2 0.1 OrthoFinder output from all 47 species
Ppi_g10417 PSAE-2 component *(PsaE) of PS-I complex & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g18393 PSAE-1 component *(PsaE) of PS-I complex & original description: none 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016679 PSAE-2 component *(PsaE) of PS-I complex & original... 0.14 OrthoFinder output from all 47 species
Solyc06g083680.3.1 PSAE-2, Solyc06g083680 component PsaE of PS-I complex 0.28 OrthoFinder output from all 47 species
Solyc09g063130.3.1 PSAE-2, Solyc09g063130 component PsaE of PS-I complex 0.2 OrthoFinder output from all 47 species
Spa_g15957 PSAE-2 component *(PsaE) of PS-I complex & original description: none 0.1 OrthoFinder output from all 47 species
Spa_g21652 PSAE-2 component *(PsaE) of PS-I complex & original description: none 0.19 OrthoFinder output from all 47 species
Tin_g03737 PSAE-2 component *(PsaE) of PS-I complex & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g08050 PSAE-1 component *(PsaE) of PS-I complex & original description: none 0.16 OrthoFinder output from all 47 species
Zm00001e009565_P001 PSAE-2, Zm00001e009565 component PsaE of PS-I complex 0.22 OrthoFinder output from all 47 species
Zm00001e033381_P001 PSAE-2, Zm00001e033381 component PsaE of PS-I complex 0.21 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006364 rRNA processing RCA Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009534 chloroplast thylakoid IDA Interproscan
CC GO:0009535 chloroplast thylakoid membrane IDA Interproscan
CC GO:0009538 photosystem I reaction center ISS Interproscan
CC GO:0009579 thylakoid IDA Interproscan
BP GO:0009657 plastid organization RCA Interproscan
BP GO:0009735 response to cytokinin IDA Interproscan
CC GO:0009941 chloroplast envelope IDA Interproscan
BP GO:0010207 photosystem II assembly RCA Interproscan
CC GO:0010287 plastoglobule IDA Interproscan
BP GO:0015979 photosynthesis RCA Interproscan
CC GO:0016020 membrane IDA Interproscan
BP GO:0019344 cysteine biosynthetic process RCA Interproscan
Type GO Term Name Evidence Source
BP GO:0000165 MAPK cascade IEP HCCA
BP GO:0002682 regulation of immune system process IEP HCCA
BP GO:0002831 regulation of response to biotic stimulus IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003727 single-stranded RNA binding IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006098 pentose-phosphate shunt IEP HCCA
BP GO:0006109 regulation of carbohydrate metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006739 NADP metabolic process IEP HCCA
BP GO:0006740 NADPH regeneration IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006873 cellular monoatomic ion homeostasis IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008187 poly-pyrimidine tract binding IEP HCCA
MF GO:0008266 poly(U) RNA binding IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009266 response to temperature stimulus IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009409 response to cold IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009532 plastid stroma IEP HCCA
CC GO:0009533 chloroplast stromal thylakoid IEP HCCA
CC GO:0009543 chloroplast thylakoid lumen IEP HCCA
CC GO:0009570 chloroplast stroma IEP HCCA
BP GO:0009595 detection of biotic stimulus IEP HCCA
BP GO:0009617 response to bacterium IEP HCCA
BP GO:0009620 response to fungus IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009637 response to blue light IEP HCCA
BP GO:0009639 response to red or far red light IEP HCCA
BP GO:0009642 response to light intensity IEP HCCA
BP GO:0009644 response to high light intensity IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009668 plastid membrane organization IEP HCCA
BP GO:0009696 salicylic acid metabolic process IEP HCCA
BP GO:0009697 salicylic acid biosynthetic process IEP HCCA
BP GO:0009743 response to carbohydrate IEP HCCA
BP GO:0009744 response to sucrose IEP HCCA
BP GO:0009755 hormone-mediated signaling pathway IEP HCCA
BP GO:0009765 photosynthesis, light harvesting IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
BP GO:0009768 photosynthesis, light harvesting in photosystem I IEP HCCA
BP GO:0009773 photosynthetic electron transport in photosystem I IEP HCCA
BP GO:0009780 photosynthetic NADP+ reduction IEP HCCA
CC GO:0009782 photosystem I antenna complex IEP HCCA
CC GO:0009783 photosystem II antenna complex IEP HCCA
BP GO:0009853 photorespiration IEP HCCA
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway IEP HCCA
BP GO:0009863 salicylic acid mediated signaling pathway IEP HCCA
BP GO:0009867 jasmonic acid mediated signaling pathway IEP HCCA
BP GO:0010027 thylakoid membrane organization IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010114 response to red light IEP HCCA
BP GO:0010155 regulation of proton transport IEP HCCA
BP GO:0010193 response to ozone IEP HCCA
BP GO:0010196 nonphotochemical quenching IEP HCCA
BP GO:0010200 response to chitin IEP HCCA
BP GO:0010205 photoinhibition IEP HCCA
BP GO:0010218 response to far red light IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
BP GO:0010243 response to organonitrogen compound IEP HCCA
BP GO:0010270 photosystem II oxygen evolving complex assembly IEP HCCA
BP GO:0010310 regulation of hydrogen peroxide metabolic process IEP HCCA
BP GO:0010363 regulation of plant-type hypersensitive response IEP HCCA
BP GO:0010941 regulation of cell death IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016168 chlorophyll binding IEP HCCA
BP GO:0018958 phenol-containing compound metabolic process IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019362 pyridine nucleotide metabolic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0030003 cellular monoatomic cation homeostasis IEP HCCA
CC GO:0030076 light-harvesting complex IEP HCCA
CC GO:0030093 chloroplast photosystem I IEP HCCA
CC GO:0030095 chloroplast photosystem II IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031347 regulation of defense response IEP HCCA
BP GO:0031348 negative regulation of defense response IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0031647 regulation of protein stability IEP HCCA
CC GO:0031977 thylakoid lumen IEP HCCA
CC GO:0031978 plastid thylakoid lumen IEP HCCA
BP GO:0032101 regulation of response to external stimulus IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0032879 regulation of localization IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034285 response to disaccharide IEP HCCA
BP GO:0034762 regulation of transmembrane transport IEP HCCA
BP GO:0034765 regulation of monoatomic ion transmembrane transport IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0042537 benzene-containing compound metabolic process IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
BP GO:0042550 photosystem I stabilization IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0042742 defense response to bacterium IEP HCCA
BP GO:0043067 regulation of programmed cell death IEP HCCA
BP GO:0043085 positive regulation of catalytic activity IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
BP GO:0043094 cellular metabolic compound salvage IEP HCCA
BP GO:0043155 negative regulation of photosynthesis, light reaction IEP HCCA
BP GO:0043269 regulation of monoatomic ion transport IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0043900 obsolete regulation of multi-organism process IEP HCCA
BP GO:0043903 regulation of biological process involved in symbiotic interaction IEP HCCA
BP GO:0044093 positive regulation of molecular function IEP HCCA
BP GO:0045088 regulation of innate immune response IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046189 phenol-containing compound biosynthetic process IEP HCCA
BP GO:0046496 nicotinamide nucleotide metabolic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0048585 negative regulation of response to stimulus IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
BP GO:0050776 regulation of immune response IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050801 monoatomic ion homeostasis IEP HCCA
BP GO:0050821 protein stabilization IEP HCCA
BP GO:0050832 defense response to fungus IEP HCCA
BP GO:0051049 regulation of transport IEP HCCA
BP GO:0051156 glucose 6-phosphate metabolic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051606 detection of stimulus IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0055080 monoatomic cation homeostasis IEP HCCA
BP GO:0055082 cellular chemical homeostasis IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
BP GO:0080135 regulation of cellular response to stress IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
CC GO:0098807 chloroplast thylakoid membrane protein complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:1904062 regulation of monoatomic cation transmembrane transport IEP HCCA
BP GO:1905156 negative regulation of photosynthesis IEP HCCA
BP GO:1990066 energy quenching IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
BP GO:2000377 regulation of reactive oxygen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003375 PSI_PsaE 82 141
No external refs found!