AT4G19690 (ATIRT1, IRT1)

Aliases : ATIRT1, IRT1

Description : iron-regulated transporter 1

Gene families : OG0000472 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000472_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G19690
Cluster	HCCA: Cluster_29

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00032p00182180	ATIRT1, IRT1,...	Solute transport.carrier-mediated transport.ZIP...	0.03	OrthoFinder output from all 47 species
AMTR_s00062p00183460	ZIP1,...	Solute transport.carrier-mediated transport.ZIP...	0.02	OrthoFinder output from all 47 species
AT1G60960	IRT3, ATIRT3	iron regulated transporter 3	0.05	OrthoFinder output from all 47 species
AT2G32270	ZIP3	zinc transporter 3 precursor	0.04	OrthoFinder output from all 47 species
AT3G12750	ZIP1	zinc transporter 1 precursor	0.03	OrthoFinder output from all 47 species
AT4G19680	IRT2, ATIRT2	iron regulated transporter 2	0.04	OrthoFinder output from all 47 species
Adi_g079780	ATZIP4, ZIP4	metal cation transporter *(ZIP) & original description: none	0.04	OrthoFinder output from all 47 species
Als_g00742	ATZIP4, ZIP4	metal cation transporter *(ZIP) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g06465	ATZIP4, ZIP4	metal cation transporter *(ZIP) & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene27419.t1	ATZIP4, ZIP4,...	metal cation transporter *(ZIP) & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0014.g013568	ZIP1	metal cation transporter *(ZIP) & original description: CDS=1-972	0.03	OrthoFinder output from all 47 species
Ceric.15G030000.1	ATZIP4, ZIP4,...	metal cation transporter *(ZIP) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.36G001400.1	ATZIP4, ZIP4,...	metal cation transporter *(ZIP) & original description:...	0.03	OrthoFinder output from all 47 species
Cre01.g000150	ZIP5	Solute transport.carrier-mediated transport.ZIP...	0.02	OrthoFinder output from all 47 species
Cre07.g351950	ATZIP9, ZIP9	Solute transport.carrier-mediated transport.ZIP...	0.02	OrthoFinder output from all 47 species
Cre13.g573950	ATZIP9, ZIP9	Solute transport.carrier-mediated transport.ZIP...	0.02	OrthoFinder output from all 47 species
Dac_g13090	ATZIP4, ZIP4	metal cation transporter *(ZIP) & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g35439	ATZIP4, ZIP4	metal cation transporter *(ZIP) & original description: none	0.05	OrthoFinder output from all 47 species
Dcu_g00948	ZIP10	metal cation transporter *(ZIP) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g31389	ATZIP4, ZIP4	metal cation transporter *(ZIP) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01032785001	ATZIP6, ZIP6	Solute transport.carrier-mediated transport.ZIP...	0.04	OrthoFinder output from all 47 species
Gb_06502	ZIP10	metal cation transporter (ZIP)	0.03	OrthoFinder output from all 47 species
Gb_39062	ATZIP4, ZIP4	metal cation transporter (ZIP)	0.02	OrthoFinder output from all 47 species
LOC_Os03g46454.1	ZIP10, LOC_Os03g46454	metal cation transporter (ZIP)	0.03	OrthoFinder output from all 47 species
LOC_Os03g46470.1	ZIP10, LOC_Os03g46470	metal cation transporter (ZIP)	0.08	OrthoFinder output from all 47 species
Len_g36026	ATZIP4, ZIP4	metal cation transporter *(ZIP) & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g17667	ATZIP4, ZIP4	metal cation transporter *(ZIP) & original description: none	0.02	OrthoFinder output from all 47 species
MA_140715g0010	ATZIP4, ZIP4	metal cation transporter (ZIP)	0.02	OrthoFinder output from all 47 species
MA_189319g0010	ZIP10	metal cation transporter (ZIP)	0.03	OrthoFinder output from all 47 species
MA_6126514g0010	ZIP1	metal cation transporter (ZIP)	0.03	OrthoFinder output from all 47 species
MA_9267623g0010	ZIP3	metal cation transporter (ZIP)	0.02	OrthoFinder output from all 47 species
Pnu_g10666	IRT3, ATIRT3	metal cation transporter *(ZIP) & original description: none	0.03	OrthoFinder output from all 47 species
Solyc02g069190.4.1	ZIP10, Solyc02g069190	metal cation transporter (ZIP)	0.07	OrthoFinder output from all 47 species
Solyc02g069200.3.1	ATIRT1, IRT1,...	metal cation transporter (ZIP)	0.08	OrthoFinder output from all 47 species
Solyc05g053370.3.1	ATZIP6, ZIP6,...	metal cation transporter (ZIP)	0.08	OrthoFinder output from all 47 species
Zm00001e005195_P002	ZIP10, Zm00001e005195	metal cation transporter (ZIP)	0.04	OrthoFinder output from all 47 species
Zm00001e033157_P001	ZIP5, Zm00001e033157	metal cation transporter (ZIP)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	RCA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005381	iron ion transmembrane transporter activity	IGI	Interproscan
MF	GO:0005381	iron ion transmembrane transporter activity	TAS	Interproscan
MF	GO:0005384	manganese ion transmembrane transporter activity	TAS	Interproscan
MF	GO:0005385	zinc ion transmembrane transporter activity	TAS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005802	trans-Golgi network	IDA	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006812	monoatomic cation transport	None	Extended
BP	GO:0006826	iron ion transport	RCA	Interproscan
BP	GO:0006826	iron ion transport	TAS	Interproscan
BP	GO:0006828	manganese ion transport	TAS	Interproscan
BP	GO:0006829	zinc ion transport	TAS	Interproscan
BP	GO:0006833	water transport	RCA	Interproscan
BP	GO:0006873	cellular monoatomic ion homeostasis	None	Extended
BP	GO:0006875	cellular metal ion homeostasis	None	Extended
BP	GO:0006879	cellular iron ion homeostasis	IMP	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0006972	hyperosmotic response	IEP	Interproscan
BP	GO:0007154	cell communication	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008324	monoatomic cation transmembrane transporter activity	None	Extended
BP	GO:0009267	cellular response to starvation	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	IEP	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009723	response to ethylene	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	IEP	Interproscan
BP	GO:0009735	response to cytokinin	IEP	Interproscan
BP	GO:0009736	cytokinin-activated signaling pathway	RCA	Interproscan
BP	GO:0009737	response to abscisic acid	IEP	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0009991	response to extracellular stimulus	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
BP	GO:0010039	response to iron ion	None	Extended
BP	GO:0010053	root epidermal cell differentiation	None	Extended
BP	GO:0010106	cellular response to iron ion starvation	RCA	Interproscan
BP	GO:0010167	response to nitrate	RCA	Interproscan
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015086	cadmium ion transmembrane transporter activity	TAS	Interproscan
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
BP	GO:0015675	nickel cation transport	IMP	Interproscan
BP	GO:0015691	cadmium ion transport	TAS	Interproscan
BP	GO:0015698	inorganic anion transport	None	Extended
BP	GO:0015706	nitrate transmembrane transport	RCA	Interproscan
CC	GO:0016020	membrane	None	Extended
BP	GO:0019725	cellular homeostasis	None	Extended
BP	GO:0021700	developmental maturation	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
BP	GO:0030001	metal ion transport	IMP	Interproscan
BP	GO:0030003	cellular monoatomic cation homeostasis	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
BP	GO:0031667	response to nutrient levels	None	Extended
BP	GO:0031668	cellular response to extracellular stimulus	None	Extended
BP	GO:0031669	cellular response to nutrient levels	None	Extended
CC	GO:0031984	organelle subcompartment	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032870	cellular response to hormone stimulus	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0042044	fluid transport	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042592	homeostatic process	None	Extended
BP	GO:0042594	response to starvation	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
MF	GO:0046873	metal ion transmembrane transporter activity	None	Extended
MF	GO:0046915	transition metal ion transmembrane transporter activity	None	Extended
BP	GO:0046916	cellular transition metal ion homeostasis	None	Extended
BP	GO:0048364	root development	None	Extended
BP	GO:0048469	cell maturation	None	Extended
BP	GO:0048527	lateral root development	RCA	Interproscan
BP	GO:0048528	post-embryonic root development	None	Extended
BP	GO:0048589	developmental growth	RCA	Interproscan
BP	GO:0048764	trichoblast maturation	None	Extended
BP	GO:0048765	root hair cell differentiation	RCA	Interproscan
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050801	monoatomic ion homeostasis	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0055065	metal ion homeostasis	None	Extended
BP	GO:0055072	iron ion homeostasis	None	Extended
BP	GO:0055076	transition metal ion homeostasis	None	Extended
BP	GO:0055080	monoatomic cation homeostasis	None	Extended
BP	GO:0055082	cellular chemical homeostasis	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0071241	cellular response to inorganic substance	None	Extended
BP	GO:0071248	cellular response to metal ion	None	Extended
BP	GO:0071281	cellular response to iron ion	IEP	Interproscan
BP	GO:0071310	cellular response to organic substance	None	Extended
BP	GO:0071369	cellular response to ethylene stimulus	IEP	Interproscan
BP	GO:0071495	cellular response to endogenous stimulus	None	Extended
BP	GO:0071496	cellular response to external stimulus	None	Extended
BP	GO:0071695	anatomical structure maturation	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0071731	response to nitric oxide	None	Extended
BP	GO:0071732	cellular response to nitric oxide	IEP	Interproscan
BP	GO:0090627	plant epidermal cell differentiation	None	Extended
BP	GO:0090696	post-embryonic plant organ development	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
BP	GO:0098660	inorganic ion transmembrane transport	None	Extended
BP	GO:0098661	inorganic anion transmembrane transport	None	Extended
BP	GO:0098771	inorganic ion homeostasis	None	Extended
CC	GO:0098791	Golgi apparatus subcompartment	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901699	cellular response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1901701	cellular response to oxygen-containing compound	None	Extended
BP	GO:1902025	nitrate import	None	Extended
BP	GO:1902170	cellular response to reactive nitrogen species	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000293	ferric-chelate reductase activity	IEP	HCCA
BP	GO:0000902	cell morphogenesis	IEP	HCCA
BP	GO:0000904	cell morphogenesis involved in differentiation	IEP	HCCA
BP	GO:0003008	system process	IEP	HCCA
BP	GO:0003013	circulatory system process	IEP	HCCA
BP	GO:0003018	vascular process in circulatory system	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004497	monooxygenase activity	IEP	HCCA
BP	GO:0006576	biogenic amine metabolic process	IEP	HCCA
BP	GO:0007275	multicellular organism development	IEP	HCCA
BP	GO:0009308	amine metabolic process	IEP	HCCA
BP	GO:0009309	amine biosynthetic process	IEP	HCCA
BP	GO:0009555	pollen development	IEP	HCCA
BP	GO:0009653	anatomical structure morphogenesis	IEP	HCCA
CC	GO:0009705	plant-type vacuole membrane	IEP	HCCA
BP	GO:0009826	unidimensional cell growth	IEP	HCCA
BP	GO:0009860	pollen tube growth	IEP	HCCA
BP	GO:0009932	cell tip growth	IEP	HCCA
BP	GO:0010043	response to zinc ion	IEP	HCCA
BP	GO:0010232	vascular transport	IEP	HCCA
BP	GO:0010233	phloem transport	IEP	HCCA
BP	GO:0010299	detoxification of cobalt ion	IEP	HCCA
BP	GO:0010312	detoxification of zinc ion	IEP	HCCA
BP	GO:0010959	regulation of metal ion transport	IEP	HCCA
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	HCCA
MF	GO:0015562	efflux transmembrane transporter activity	IEP	HCCA
BP	GO:0016049	cell growth	IEP	HCCA
BP	GO:0016053	organic acid biosynthetic process	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0016706	2-oxoglutarate-dependent dioxygenase activity	IEP	HCCA
MF	GO:0016722	oxidoreductase activity, acting on metal ions	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
MF	GO:0030410	nicotianamine synthase activity	IEP	HCCA
BP	GO:0030417	nicotianamine metabolic process	IEP	HCCA
BP	GO:0030418	nicotianamine biosynthetic process	IEP	HCCA
BP	GO:0034756	regulation of iron ion transport	IEP	HCCA
BP	GO:0042401	biogenic amine biosynthetic process	IEP	HCCA
BP	GO:0043269	regulation of monoatomic ion transport	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
BP	GO:0044283	small molecule biosynthetic process	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0048229	gametophyte development	IEP	HCCA
BP	GO:0048588	developmental cell growth	IEP	HCCA
BP	GO:0051049	regulation of transport	IEP	HCCA
MF	GO:0051213	dioxygenase activity	IEP	HCCA
BP	GO:0060560	developmental growth involved in morphogenesis	IEP	HCCA
BP	GO:0061687	detoxification of inorganic compound	IEP	HCCA
BP	GO:0072350	tricarboxylic acid metabolic process	IEP	HCCA
BP	GO:0072351	tricarboxylic acid biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003689	ZIP	51	173

External Links

No external refs found!

AT4G19690 (ATIRT1, IRT1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation