Heatmap: Cluster_29 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg cell
Ovule
Uninucleate microspore (Col-0)
Uninucleate microspore (Ler-0)
Pollen (bicellular, Col-0)
Pollen (late bicellular, Col-0)
Pollen (bicellular, Ler-0)
Pollen (tricellular, Col-0)
Pollen (tricellular, Ler-0)
Pollen (mature, Col-0)
Pollen (mature, Ler-0)
Sperm
Pollen tube (Col-0)
Flower (receptacles)
Flower (floral buds)
Flower (sepals)
Flower (petals)
Flower (stamen filaments)
Flower (anthers)
Flower (carpels)
Flower (stigmatic tissue)
Pedicel
Axis of the inflorescence
Silique
Silique (senescent)
Pods of siliques
Pods of siliques (senescent)
Embryo
Endosperm
Seed
Seed (young)
Seed (germinating)
Seedling
Seedling (etiolated)
Meristem
Stem (internode)
Stem (internode, senescent)
Stems
Leaf (rosette)
Epidermis cells
Mature guard cells
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root (apex)
Root (stele)
Root (QC cells)
Root (tip)
AT1G01580 (FRO2)
-6.28 -6.63 -5.29 -5.51 -6.85 -3.94 -4.63 -4.54 -6.18 -8.29 - - -7.53 2.64 0.2 -0.53 -6.4 -4.34 0.42 -7.09 - -2.31 -3.7 -7.12 1.31 -6.74 -3.12 -5.71 -5.53 1.27 -7.89 0.08 -0.14 1.39 -1.59 -4.5 0.11 -1.9 -0.44 -3.54 - -3.83 -4.29 1.11 4.53 - -6.34 -1.19
-3.47 -1.19 - - -1.69 -1.47 - - - - - - - - - - -1.28 - -0.02 -2.28 - - - 2.39 - 1.64 - 0.03 0.72 - -1.57 3.68 -3.14 2.3 - -0.07 - -2.09 - - - -0.08 1.59 - 3.26 - - 0.42
AT1G21310 (RSH)
-8.13 -4.66 -12.61 - - - -9.89 - -14.33 -14.24 - -14.6 - -6.2 -9.34 -3.07 -9.39 -6.51 -5.62 -2.81 -4.62 -1.4 0.91 -3.26 -4.66 -4.06 -7.8 -3.79 1.4 -8.9 -2.16 1.55 0.26 2.76 -0.5 -0.88 -2.36 1.45 -0.96 -5.93 - 3.9 2.61 -3.22 2.01 - -13.51 0.43
-10.02 -4.09 -11.15 - - - -10.48 - - -10.81 - - - - -7.23 -13.35 -12.18 -8.47 -10.24 -4.05 -6.33 - - -13.27 -7.5 -7.81 -7.42 - -5.08 -7.96 -5.81 1.91 -0.87 1.0 -11.76 -10.52 -8.29 -4.64 -13.27 -7.54 - 3.73 3.23 -4.88 4.09 - - 0.78
-4.86 -0.78 - - - -0.99 - - - - - 1.02 - -2.95 - 1.79 3.99 0.55 1.36 0.17 -0.58 0.45 - -0.8 - -0.31 -0.22 - -2.01 - -0.72 -3.05 0.25 1.71 0.45 -1.21 - -0.52 -3.98 - - 0.56 1.14 - 1.85 - - -0.51
0.4 -0.0 1.55 1.26 1.38 1.55 1.31 -0.39 -1.19 -2.69 -1.39 -3.52 -1.82 -0.82 -0.6 -1.2 -0.94 -0.64 -1.19 -0.23 -1.01 -1.04 -0.65 -1.09 -2.08 -1.42 -1.38 -0.4 1.7 -5.9 0.38 -0.22 -1.6 -1.96 -0.59 -0.82 -2.41 -1.48 -2.59 -2.92 - -2.33 0.72 1.07 3.22 - - -0.19
- -2.35 - - - - - - - - - -7.67 -6.32 -0.77 -3.66 -1.36 -3.73 - -7.4 -2.46 -5.74 -0.82 -2.19 0.52 0.72 1.04 -2.43 - 0.64 1.37 -1.01 -0.4 -0.2 0.63 -2.23 -2.46 2.45 0.01 0.73 - - 3.64 1.51 -4.38 3.08 - - -2.46
- -5.73 - - - - - - - - -2.32 - - - - -4.47 - - -1.78 -5.18 - - - - - - - - -2.06 - -4.2 -2.12 -2.96 0.72 -7.5 - - -5.71 -5.74 - - 2.98 -1.55 - 5.2 - - -
0.56 -4.31 0.4 -1.4 0.28 - 0.56 - - - - - -2.35 -2.65 - -4.1 - - -0.91 -3.5 - - -3.01 -5.08 - -5.15 - 0.63 -1.19 - -3.54 - -0.92 -0.88 -2.5 - -3.25 -2.55 -2.92 - - - -2.02 1.18 5.1 - -7.19 -1.84
-4.92 -4.3 - - - - - - - -3.63 - 2.27 - - - - - - - - - - - - - - - - - -3.76 - 1.36 -1.64 1.14 - - -2.07 -4.54 -5.66 - - 2.91 -1.81 - 4.89 - - -3.03
3.83 -2.95 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -1.49 1.55 - 2.17 - - 1.71 0.28 - - - 1.88 - - 4.15 - - -
- - - - - - - - - - - - -2.94 - - - - - - -6.77 - - - - - - - - - - - - - 0.16 -1.85 -3.07 -2.26 -4.3 -5.97 - - - - - 5.53 - - -
AT1G56160 (MYB72)
0.67 -2.4 1.93 0.1 1.96 2.68 0.99 2.52 -0.54 -1.08 -2.94 0.63 -2.79 -3.97 -2.02 -5.54 - -4.74 -2.29 -3.11 -5.54 -5.37 -5.44 -2.42 - -3.58 -5.54 -2.13 -0.12 -5.19 -3.77 -5.26 -3.14 -2.77 -5.86 -4.42 -0.56 -3.26 -2.63 -2.21 - - -4.34 - 2.28 3.53 - -5.42
AT1G78090 (TPPB)
-3.46 0.84 - - - -6.95 -5.94 -7.4 - -7.72 - -8.0 -5.45 0.69 1.61 -1.21 0.48 -0.76 2.61 -0.5 -3.37 -1.34 -2.13 0.17 -7.97 -1.0 -3.62 - -0.29 -10.36 2.39 -3.69 -1.83 -0.66 -1.57 0.46 -3.37 -0.56 -3.26 - -8.14 3.14 0.51 -4.57 3.26 - - -2.7
AT2G14920 (ST4A)
-5.95 - - - - - - - - - - - - - - - - - -6.18 -8.24 -4.51 - - - - - - - - - - -1.85 -2.04 -0.78 -8.54 - - -6.35 - - - -0.44 3.73 -0.27 4.77 - - 2.24
- - - - - - - - 0.27 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.55 - - -
- -3.67 2.8 2.16 2.6 1.36 2.39 1.8 0.45 -3.09 -2.17 -5.79 -6.25 - -0.63 -6.42 -5.48 - -2.1 -4.83 - -5.35 - -5.49 - -5.2 - -2.7 -5.16 -7.17 -6.78 -1.72 -4.92 -4.18 -4.65 - - -6.51 -5.7 - - -4.4 -5.31 -4.73 3.97 - - -
- -3.87 -5.71 - - -1.12 - - - -7.96 - - - - - - - - -0.83 -3.53 - - - -3.91 - -1.18 - - -0.34 - - 0.69 -0.04 -1.16 -0.92 - - -6.68 - - 3.49 3.45 3.14 -1.45 2.86 - -0.64 1.46
AT2G28160 (FRU)
-6.36 -4.34 -4.51 -7.41 -5.29 - -6.35 - - - - -8.33 - -3.78 -2.51 -1.45 -2.48 - -5.37 -2.68 - -2.27 -3.18 -4.26 -7.65 -4.95 -7.51 -2.95 -5.28 -8.13 -4.61 -0.31 -1.51 0.58 -3.47 -3.06 -3.85 -2.72 -1.38 -7.35 - 3.83 2.69 1.32 4.07 - - 1.48
- - - - - - - - - - - - - -1.2 - - - - -1.49 - - - - - - - - - 0.14 - - - 0.74 -2.8 - - -0.92 -5.25 -0.52 - - 5.34 - - 1.34 - - -
- - 2.84 1.72 - - 2.67 - - - - - - - - - - - - - - - - - - - - - - - - - - 1.58 - - - -2.84 1.69 - - 4.63 - - - - - -
AT2G31081 (CLE4)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -3.1 1.12 - - - -5.72 - - - 2.06 -0.2 - 5.32 - - -0.32
AT2G31082 (CLE7)
- - - - - - - - - - - - -1.35 - - - - -1.11 1.91 - - - - - - - - - - - - - -3.71 1.26 - - - -6.78 - - - 4.3 2.95 -0.98 3.61 - - -0.46
- -4.28 - - - - - - - - - -3.06 -0.47 -0.65 - - - -1.23 - -3.8 - - - - - - - - - - - 0.38 0.08 2.52 -0.41 0.24 0.06 -1.49 - - - 4.04 0.32 - 4.08 - - -
-7.71 -2.29 -12.92 - - -12.1 -11.68 - - -12.3 -12.29 - - -0.99 -7.25 -4.63 -3.98 -4.63 -4.55 -3.0 -8.7 -3.15 -2.77 -0.77 -9.43 -2.33 -6.15 -6.82 1.4 -9.06 -0.17 0.93 0.37 3.49 -4.16 0.56 -1.84 -0.64 -3.95 -6.94 -12.29 3.87 2.2 -5.26 2.35 -11.29 -5.0 -0.01
- -6.46 - - - - - -0.51 - -3.29 - - - - - - - - - -3.24 - - - - -2.97 - - - -4.05 - -2.84 1.05 -0.62 0.77 -5.18 -2.7 -2.6 -4.06 -3.51 - - 4.82 2.47 - 3.0 - - -2.78
AT3G02850 (SKOR)
-4.79 -4.34 -5.6 -3.35 -4.73 -1.39 -3.62 2.15 1.94 1.32 2.41 1.74 1.64 -3.79 -0.51 -2.49 -2.42 -5.49 0.57 -3.65 -4.75 -2.46 -3.68 -4.73 -4.82 -3.91 -2.65 -4.71 -6.86 -6.64 -6.39 -1.72 -1.73 -0.5 -2.81 -6.09 -4.45 -4.15 -3.71 -0.92 -7.1 2.12 -3.93 -7.74 3.87 -6.98 -2.9 -6.9
- -4.13 0.76 0.32 1.31 0.06 1.55 - - - - -4.48 - - - - - - -5.66 -4.78 - - - -2.13 - -2.8 - - 0.01 -5.89 - - -2.05 -1.31 -2.45 - - -2.75 - - - - - - 5.17 - - -
-5.5 - -3.6 - - - - - - - - -4.35 -3.82 -5.87 - - - - - - - - - - - -6.22 - - - -5.9 -4.97 -0.59 -1.34 -0.0 -4.75 - - -5.64 -8.16 - - 4.72 2.11 -2.45 3.88 - - -4.17
- - - - - - 2.56 - - - - 1.02 0.82 - - - - - - - - - - - - - - - - - - 0.88 -0.34 -0.71 - - - - - - - 4.52 2.6 - 2.61 - - -
- - -0.93 -2.09 0.83 - - - - - - -4.26 - -3.63 - - - - 0.12 -6.62 - - - - - - - - - - - 1.19 0.22 0.45 - - - -6.42 -4.64 - - -0.06 3.72 0.61 4.29 - - 2.06
- - - - - - - - - - - - - - - - - - - - - - - - - - - - 3.28 - - - - -0.21 - - 3.65 0.35 0.84 - - - - - 4.45 - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - -4.46 - - - - - - - - - - -5.68 - - - - -4.61 - - - - -4.07 - -6.13 - - -1.9 - - 2.15 -1.19 0.36 - - - -6.37 - - -3.56 -0.4 3.07 -0.73 4.89 - - 0.85
-10.64 -13.53 - -11.72 -9.71 - -13.08 - - - -12.81 - - -12.33 - - - - -10.74 -12.28 -12.85 -10.52 - -15.05 -7.38 -9.01 -7.7 - -6.02 -8.18 -14.17 2.09 0.16 1.44 -8.16 -8.54 -8.71 -4.31 -13.28 -8.51 - 3.82 3.31 -4.84 3.75 - -12.91 1.16
- -1.81 1.82 0.14 0.06 -0.13 0.19 - - - - - -0.55 -0.79 - - - - - -2.35 - - - -4.36 - - - 4.17 3.03 - - - - - - - - -3.39 -1.2 - - - - - 3.56 - - -
- 0.19 - - -3.32 -3.55 -2.13 - - - - -5.86 - -5.23 2.7 -5.9 0.61 -2.03 - -0.67 1.75 -5.09 - -5.97 - - - - -2.9 - -1.27 0.96 -2.1 -0.38 -5.11 - - -4.69 -8.36 - - -0.73 2.67 3.64 3.08 - -5.67 1.39
- -5.33 -4.43 - - -2.9 - -1.11 -3.09 -2.76 -4.27 -6.65 0.31 -0.03 1.41 2.78 0.08 -5.2 0.84 -3.33 - -3.99 -4.16 -2.03 3.19 -1.3 -0.11 -1.7 -1.28 2.05 -4.01 2.89 -3.1 1.24 -5.91 - -4.7 -0.86 -6.06 - - -0.91 -2.03 - 2.4 - - -
AT3G58810 (MTP3)
1.6 1.6 -1.17 -2.47 -1.14 -2.53 -1.56 -3.45 -5.81 -7.58 - -3.61 -3.65 0.34 -1.12 -1.47 -0.91 -0.55 -2.78 1.11 0.23 -0.03 0.43 -0.84 -4.44 -0.63 0.3 0.95 -1.3 -5.02 0.35 -2.22 0.07 1.79 -1.11 -0.13 -1.61 -0.45 -1.71 -2.87 -1.77 1.44 0.01 0.25 3.36 0.05 -9.08 -0.37
- 2.61 - - - - - - - - - - - - - - - - - - - - - - - - - - - - 2.27 - 1.0 - - - - - - - - - - 3.74 4.16 - - 1.97
- -4.99 - - - - - - - - - - - - - - - - - - - - - -6.54 - - - - - - -2.44 2.3 -2.43 -0.58 - - - -2.57 -4.42 - - 2.97 - - 5.08 - - -
AT4G19690 (IRT1)
-3.09 2.04 -6.02 - -7.5 - -6.31 - - -8.18 -8.22 -9.95 - -1.22 1.58 -1.4 -5.5 -2.3 1.72 0.74 2.33 -5.29 -8.19 -8.95 - -7.09 -8.3 - - - 1.16 -9.0 0.56 2.94 -4.85 -1.91 -8.35 -5.38 -12.03 - - -3.18 - - 4.16 - - -
- -4.6 - -3.29 - - -4.22 - - - - - - -6.29 - -3.33 -2.43 - - -6.14 -2.55 - - -1.89 - -1.64 - - - - -6.7 0.59 -1.78 0.31 -7.97 0.6 -3.43 0.4 -4.86 - - 1.55 -3.2 -1.59 5.21 - - -2.01
- -0.45 -3.41 -2.37 - -3.74 -2.72 - -2.71 -4.95 -2.4 -5.67 - -0.46 -2.29 0.03 -2.5 -0.43 0.94 -1.19 -2.6 0.48 -0.13 -0.48 -3.62 -0.44 -1.01 - -3.58 - -2.22 -2.44 -1.76 -1.46 -0.61 1.6 -0.75 -0.63 -2.9 - - 0.22 3.23 - 4.26 - - -0.43
-3.61 -6.28 -1.39 -4.87 -3.37 -4.25 -4.82 - - - - - - - - -5.88 -3.94 - -3.7 -3.15 - - - -10.38 -4.2 -5.92 - -1.94 -1.81 - - - -3.9 -1.95 - - -0.32 -7.64 -6.11 -4.67 - 0.46 -4.78 -4.19 5.32 1.77 -0.96 -
-3.71 -4.38 -4.36 -6.81 -6.01 -6.69 -6.98 -9.94 - -10.94 - -12.05 -8.23 -1.74 -7.35 -7.49 -5.85 -7.88 -10.36 -5.34 -8.55 -3.3 -5.33 0.01 -8.75 -0.34 -6.12 -6.5 -8.7 -8.87 -5.7 -3.09 -0.33 0.14 -2.07 3.39 2.97 1.34 -3.76 - - 2.96 -2.72 -4.05 3.82 -2.38 -7.99 -5.93
AT5G23990 (FRO5)
- -8.42 - - - - -8.36 -3.83 -6.48 -6.07 -8.5 - - - - - - - -7.75 -7.19 - - - -8.72 - -7.09 -8.4 - -4.88 - -10.78 -10.59 -0.34 1.2 - - -8.5 -4.41 -5.32 - - 4.37 -1.96 -4.95 4.57 - - -7.16
-3.06 -4.48 0.55 -1.02 0.35 -0.74 -0.82 -1.56 - - - - - -2.87 -0.94 - -2.09 - -2.62 -2.8 - - - -3.61 - -1.53 - - 0.9 -0.49 -1.34 0.99 -0.8 0.61 -4.27 -1.01 - -1.78 -3.0 -0.24 - 2.68 2.09 0.24 4.14 - -3.8 1.6
- - - - - -0.89 - - - - - - - - - - - - - -4.28 - - - - - - - - -1.8 - - 0.45 -1.29 -0.74 - - - - - - - 4.35 -0.37 - 4.56 - - -
- - - - - - - - - - - - 2.32 - - - - - - -7.77 - - - - -4.36 - - - -3.86 - - 1.41 0.22 -0.05 - - - - - - - 4.56 -2.01 - 3.84 - - -
-2.33 -1.06 - -1.03 - - -2.08 - - - - - - -2.71 - - - - -2.74 -5.79 - - - - - - - - -1.46 - -1.35 -3.31 0.75 -1.09 2.02 - - -0.1 -5.51 - - - 2.96 0.14 4.83 - - -0.16
- -7.76 - -5.81 -2.42 -3.15 -3.26 -0.38 -1.27 -2.17 -1.96 -2.53 -3.44 -6.04 -4.83 - - - -3.89 -6.96 -1.58 - - -11.41 - -7.97 -3.22 - - - -1.74 0.23 -2.95 2.54 - - -3.43 -3.93 -8.7 - - 3.91 3.37 -0.7 3.5 - - -2.5
AT5G46360 (KCO3)
-3.3 - 2.3 3.15 3.29 -0.09 2.18 - - -2.43 - - - - - - - - -1.81 - - - - - - -4.77 - - -3.95 - - 0.5 - -4.73 - - -1.57 -3.89 -3.05 - - -0.09 0.21 - 3.79 - - -1.42
- -7.98 - - - - - - - - - - - - -5.73 - -7.0 - -3.98 -5.16 -5.93 -6.76 - - - -7.89 - - -5.04 - -4.77 0.29 1.85 1.94 -0.43 - -4.9 -2.12 -7.04 -2.07 - 1.87 1.56 -3.55 4.95 - - -1.85
AT5G50820 (NAC097)
-2.51 0.87 - - - - - - - - - - - 0.56 0.38 0.4 2.75 1.45 0.65 0.81 0.07 -0.44 0.7 0.75 -6.77 0.42 -6.23 - -2.96 - 1.88 -0.14 -0.96 -1.27 0.8 1.62 -2.0 -0.45 -4.19 - - 0.89 1.45 -1.99 2.45 - - -0.16
-7.4 -6.14 -3.83 -2.89 -2.77 -6.87 -3.77 - - -8.07 - - - -6.94 - -2.42 - - -8.11 -6.51 -5.61 -0.59 -3.65 -3.64 - -4.23 - -3.2 -4.15 - -8.86 -0.68 -2.79 -1.29 -2.58 -5.49 - -3.59 - - - 3.81 3.11 1.31 4.26 - - -0.89

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.