Aliases : LIL3:1
Description : Chlorophyll A-B binding family protein
Gene families : OG0002922 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002922_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g020993 | LIL3:1 | LHCII-stabilizing factor *(SEP3) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Aev_g38602 | LIL3:1 | LHCII-stabilizing factor *(SEP3) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Azfi_s0002.g001642 | LIL3:1 | LHCII-stabilizing factor *(SEP3) & original description:... | 0.07 | OrthoFinder output from all 47 species | |
Ceric.20G033200.1 | LIL3:1, Ceric.20G033200 | LHCII-stabilizing factor *(SEP3) & original description:... | 0.09 | OrthoFinder output from all 47 species | |
Cre03.g199535 | LIL3:1 | Photosynthesis.photophosphorylation.photosystem... | 0.07 | OrthoFinder output from all 47 species | |
Ehy_g03144 | LIL3:1 | LHCII-stabilizing factor *(SEP3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Gb_05189 | LIL3:1 | SEP3 LHC-related protein | 0.12 | OrthoFinder output from all 47 species | |
LOC_Os02g03330.1 | LIL3:1, LOC_Os02g03330 | SEP3 LHC-related protein | 0.04 | OrthoFinder output from all 47 species | |
MA_10427346g0010 | LIL3:1 | SEP3 LHC-related protein | 0.05 | OrthoFinder output from all 47 species | |
Mp1g17030.1 | LIL3:1 | SEP3 LHC-related protein | 0.14 | OrthoFinder output from all 47 species | |
Ore_g28824 | LIL3:1 | LHCII-stabilizing factor *(SEP3) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Pp3c2_19700V3.1 | LIL3:1, Pp3c2_19700 | Chlorophyll A-B binding family protein | 0.04 | OrthoFinder output from all 47 species | |
Smo106498 | LIL3:1 | Photosynthesis.photophosphorylation.photosystem... | 0.07 | OrthoFinder output from all 47 species | |
Solyc08g077880.3.1 | LIL3:1, Solyc08g077880 | SEP3 LHC-related protein | 0.04 | OrthoFinder output from all 47 species | |
Spa_g16684 | LIL3:1 | LHCII-stabilizing factor *(SEP3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e013528_P001 | LIL3:1, Zm00001e013528 | SEP3 LHC-related protein | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | ISS | Interproscan |
BP | GO:0006098 | pentose-phosphate shunt | RCA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | TAS | Interproscan |
BP | GO:0006364 | rRNA processing | RCA | Interproscan |
BP | GO:0006417 | regulation of translation | RCA | Interproscan |
CC | GO:0009507 | chloroplast | IDA | Interproscan |
CC | GO:0009507 | chloroplast | ISM | Interproscan |
CC | GO:0009535 | chloroplast thylakoid membrane | IDA | Interproscan |
BP | GO:0009637 | response to blue light | RCA | Interproscan |
BP | GO:0009657 | plastid organization | RCA | Interproscan |
BP | GO:0009902 | chloroplast relocation | RCA | Interproscan |
BP | GO:0009965 | leaf morphogenesis | RCA | Interproscan |
BP | GO:0010027 | thylakoid membrane organization | RCA | Interproscan |
BP | GO:0010103 | stomatal complex morphogenesis | RCA | Interproscan |
BP | GO:0010114 | response to red light | RCA | Interproscan |
BP | GO:0010207 | photosystem II assembly | RCA | Interproscan |
BP | GO:0010218 | response to far red light | RCA | Interproscan |
BP | GO:0015979 | photosynthesis | RCA | Interproscan |
BP | GO:0015995 | chlorophyll biosynthetic process | RCA | Interproscan |
BP | GO:0019288 | isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | RCA | Interproscan |
BP | GO:0030154 | cell differentiation | RCA | Interproscan |
BP | GO:0034660 | ncRNA metabolic process | RCA | Interproscan |
BP | GO:0045893 | positive regulation of DNA-templated transcription | RCA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000023 | maltose metabolic process | IEP | HCCA |
BP | GO:0000097 | sulfur amino acid biosynthetic process | IEP | HCCA |
BP | GO:0000271 | polysaccharide biosynthetic process | IEP | HCCA |
BP | GO:0000272 | polysaccharide catabolic process | IEP | HCCA |
BP | GO:0003006 | developmental process involved in reproduction | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003727 | single-stranded RNA binding | IEP | HCCA |
MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
MF | GO:0004853 | uroporphyrinogen decarboxylase activity | IEP | HCCA |
MF | GO:0005198 | structural molecule activity | IEP | HCCA |
MF | GO:0005507 | copper ion binding | IEP | HCCA |
CC | GO:0005694 | chromosome | IEP | HCCA |
CC | GO:0005840 | ribosome | IEP | HCCA |
BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
BP | GO:0005982 | starch metabolic process | IEP | HCCA |
BP | GO:0005984 | disaccharide metabolic process | IEP | HCCA |
BP | GO:0006066 | alcohol metabolic process | IEP | HCCA |
BP | GO:0006073 | cellular glucan metabolic process | IEP | HCCA |
BP | GO:0006089 | lactate metabolic process | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
BP | GO:0006412 | translation | IEP | HCCA |
BP | GO:0006414 | translational elongation | IEP | HCCA |
BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
BP | GO:0006534 | cysteine metabolic process | IEP | HCCA |
BP | GO:0006605 | protein targeting | IEP | HCCA |
BP | GO:0006631 | fatty acid metabolic process | IEP | HCCA |
BP | GO:0006633 | fatty acid biosynthetic process | IEP | HCCA |
BP | GO:0006636 | unsaturated fatty acid biosynthetic process | IEP | HCCA |
BP | GO:0006650 | glycerophospholipid metabolic process | IEP | HCCA |
BP | GO:0006655 | phosphatidylglycerol biosynthetic process | IEP | HCCA |
BP | GO:0006714 | sesquiterpenoid metabolic process | IEP | HCCA |
BP | GO:0006720 | isoprenoid metabolic process | IEP | HCCA |
BP | GO:0006721 | terpenoid metabolic process | IEP | HCCA |
BP | GO:0006733 | obsolete oxidoreduction coenzyme metabolic process | IEP | HCCA |
BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
BP | GO:0006952 | defense response | IEP | HCCA |
BP | GO:0007275 | multicellular organism development | IEP | HCCA |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
MF | GO:0008187 | poly-pyrimidine tract binding | IEP | HCCA |
MF | GO:0008266 | poly(U) RNA binding | IEP | HCCA |
BP | GO:0008299 | isoprenoid biosynthetic process | IEP | HCCA |
BP | GO:0009056 | catabolic process | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0009063 | amino acid catabolic process | IEP | HCCA |
BP | GO:0009069 | serine family amino acid metabolic process | IEP | HCCA |
BP | GO:0009070 | serine family amino acid biosynthetic process | IEP | HCCA |
BP | GO:0009072 | aromatic amino acid metabolic process | IEP | HCCA |
BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | HCCA |
BP | GO:0009106 | lipoate metabolic process | IEP | HCCA |
BP | GO:0009108 | obsolete coenzyme biosynthetic process | IEP | HCCA |
BP | GO:0009250 | glucan biosynthetic process | IEP | HCCA |
CC | GO:0009295 | nucleoid | IEP | HCCA |
BP | GO:0009311 | oligosaccharide metabolic process | IEP | HCCA |
BP | GO:0009438 | methylglyoxal metabolic process | IEP | HCCA |
BP | GO:0009451 | RNA modification | IEP | HCCA |
CC | GO:0009508 | plastid chromosome | IEP | HCCA |
CC | GO:0009526 | plastid envelope | IEP | HCCA |
CC | GO:0009532 | plastid stroma | IEP | HCCA |
CC | GO:0009534 | chloroplast thylakoid | IEP | HCCA |
CC | GO:0009570 | chloroplast stroma | IEP | HCCA |
CC | GO:0009579 | thylakoid | IEP | HCCA |
BP | GO:0009607 | response to biotic stimulus | IEP | HCCA |
BP | GO:0009615 | response to virus | IEP | HCCA |
BP | GO:0009631 | cold acclimation | IEP | HCCA |
BP | GO:0009664 | plant-type cell wall organization | IEP | HCCA |
BP | GO:0009687 | abscisic acid metabolic process | IEP | HCCA |
BP | GO:0009688 | abscisic acid biosynthetic process | IEP | HCCA |
BP | GO:0009735 | response to cytokinin | IEP | HCCA |
BP | GO:0009790 | embryo development | IEP | HCCA |
BP | GO:0009793 | embryo development ending in seed dormancy | IEP | HCCA |
BP | GO:0009894 | regulation of catabolic process | IEP | HCCA |
BP | GO:0009895 | negative regulation of catabolic process | IEP | HCCA |
CC | GO:0009941 | chloroplast envelope | IEP | HCCA |
CC | GO:0010007 | magnesium chelatase complex | IEP | HCCA |
BP | GO:0010228 | vegetative to reproductive phase transition of meristem | IEP | HCCA |
BP | GO:0010267 | ta-siRNA processing | IEP | HCCA |
BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
BP | GO:0016093 | polyprenol metabolic process | IEP | HCCA |
BP | GO:0016094 | polyprenol biosynthetic process | IEP | HCCA |
BP | GO:0016106 | sesquiterpenoid biosynthetic process | IEP | HCCA |
BP | GO:0016108 | tetraterpenoid metabolic process | IEP | HCCA |
BP | GO:0016109 | tetraterpenoid biosynthetic process | IEP | HCCA |
BP | GO:0016114 | terpenoid biosynthetic process | IEP | HCCA |
BP | GO:0016116 | carotenoid metabolic process | IEP | HCCA |
BP | GO:0016117 | carotenoid biosynthetic process | IEP | HCCA |
BP | GO:0016226 | iron-sulfur cluster assembly | IEP | HCCA |
MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
BP | GO:0016553 | base conversion or substitution editing | IEP | HCCA |
BP | GO:0016556 | mRNA modification | IEP | HCCA |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
MF | GO:0016851 | magnesium chelatase activity | IEP | HCCA |
MF | GO:0016874 | ligase activity | IEP | HCCA |
MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
MF | GO:0016987 | sigma factor activity | IEP | HCCA |
MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
BP | GO:0019243 | methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione | IEP | HCCA |
BP | GO:0019252 | starch biosynthetic process | IEP | HCCA |
BP | GO:0019344 | cysteine biosynthetic process | IEP | HCCA |
BP | GO:0019348 | dolichol metabolic process | IEP | HCCA |
BP | GO:0019408 | dolichol biosynthetic process | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
BP | GO:0019684 | photosynthesis, light reaction | IEP | HCCA |
BP | GO:0019748 | secondary metabolic process | IEP | HCCA |
BP | GO:0019757 | glycosinolate metabolic process | IEP | HCCA |
BP | GO:0019758 | glycosinolate biosynthetic process | IEP | HCCA |
BP | GO:0019760 | glucosinolate metabolic process | IEP | HCCA |
BP | GO:0019761 | glucosinolate biosynthetic process | IEP | HCCA |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | HCCA |
BP | GO:0030422 | siRNA processing | IEP | HCCA |
BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | HCCA |
BP | GO:0031329 | regulation of cellular catabolic process | IEP | HCCA |
BP | GO:0031330 | negative regulation of cellular catabolic process | IEP | HCCA |
CC | GO:0031967 | organelle envelope | IEP | HCCA |
CC | GO:0031975 | envelope | IEP | HCCA |
CC | GO:0031976 | plastid thylakoid | IEP | HCCA |
BP | GO:0032501 | multicellular organismal process | IEP | HCCA |
BP | GO:0032544 | plastid translation | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
BP | GO:0033559 | unsaturated fatty acid metabolic process | IEP | HCCA |
BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | HCCA |
BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0035196 | miRNA processing | IEP | HCCA |
BP | GO:0042180 | cellular ketone metabolic process | IEP | HCCA |
BP | GO:0042182 | ketone catabolic process | IEP | HCCA |
BP | GO:0042254 | ribosome biogenesis | IEP | HCCA |
CC | GO:0042646 | plastid nucleoid | IEP | HCCA |
BP | GO:0042793 | plastid transcription | IEP | HCCA |
BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
BP | GO:0043207 | response to external biotic stimulus | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
BP | GO:0043288 | apocarotenoid metabolic process | IEP | HCCA |
BP | GO:0043289 | apocarotenoid biosynthetic process | IEP | HCCA |
BP | GO:0043487 | regulation of RNA stability | IEP | HCCA |
BP | GO:0043489 | RNA stabilization | IEP | HCCA |
BP | GO:0043603 | amide metabolic process | IEP | HCCA |
BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
BP | GO:0044042 | glucan metabolic process | IEP | HCCA |
BP | GO:0044085 | cellular component biogenesis | IEP | HCCA |
BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | HCCA |
BP | GO:0044272 | sulfur compound biosynthetic process | IEP | HCCA |
BP | GO:0044282 | small molecule catabolic process | IEP | HCCA |
BP | GO:0044283 | small molecule biosynthetic process | IEP | HCCA |
BP | GO:0044419 | biological process involved in interspecies interaction between organisms | IEP | HCCA |
BP | GO:0044550 | secondary metabolite biosynthetic process | IEP | HCCA |
BP | GO:0045017 | glycerolipid biosynthetic process | IEP | HCCA |
BP | GO:0045036 | protein targeting to chloroplast | IEP | HCCA |
MF | GO:0045182 | translation regulator activity | IEP | HCCA |
BP | GO:0045229 | external encapsulating structure organization | IEP | HCCA |
BP | GO:0046165 | alcohol biosynthetic process | IEP | HCCA |
BP | GO:0046185 | aldehyde catabolic process | IEP | HCCA |
BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
BP | GO:0046471 | phosphatidylglycerol metabolic process | IEP | HCCA |
BP | GO:0046474 | glycerophospholipid biosynthetic process | IEP | HCCA |
BP | GO:0046486 | glycerolipid metabolic process | IEP | HCCA |
BP | GO:0048481 | plant ovule development | IEP | HCCA |
BP | GO:0048564 | photosystem I assembly | IEP | HCCA |
BP | GO:0048856 | anatomical structure development | IEP | HCCA |
MF | GO:0051002 | ligase activity, forming nitrogen-metal bonds | IEP | HCCA |
MF | GO:0051003 | ligase activity, forming nitrogen-metal bonds, forming coordination complexes | IEP | HCCA |
BP | GO:0051596 | methylglyoxal catabolic process | IEP | HCCA |
BP | GO:0051607 | defense response to virus | IEP | HCCA |
BP | GO:0051707 | response to other organism | IEP | HCCA |
MF | GO:0051744 | 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity | IEP | HCCA |
BP | GO:0061727 | methylglyoxal catabolic process to lactate | IEP | HCCA |
BP | GO:0070918 | regulatory ncRNA processing | IEP | HCCA |
BP | GO:0071554 | cell wall organization or biogenesis | IEP | HCCA |
BP | GO:0071555 | cell wall organization | IEP | HCCA |
BP | GO:0072330 | monocarboxylic acid biosynthetic process | IEP | HCCA |
BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
BP | GO:0072596 | establishment of protein localization to chloroplast | IEP | HCCA |
BP | GO:0072598 | protein localization to chloroplast | IEP | HCCA |
BP | GO:0080183 | response to photooxidative stress | IEP | HCCA |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
BP | GO:0098542 | defense response to other organism | IEP | HCCA |
BP | GO:0140546 | defense response to symbiont | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
BP | GO:1901606 | alpha-amino acid catabolic process | IEP | HCCA |
BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | HCCA |
BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | HCCA |
BP | GO:1902369 | negative regulation of RNA catabolic process | IEP | HCCA |
BP | GO:1902644 | tertiary alcohol metabolic process | IEP | HCCA |
BP | GO:1902645 | tertiary alcohol biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |