AT4G16780 (HB-2, ATHB2, ATHB-2, HAT4)

Aliases : HB-2, ATHB2, ATHB-2, HAT4

Description : homeobox protein 2

Gene families : OG0000538 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000538_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G16780
Cluster	HCCA: Cluster_73

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00245530	HAT9,...	No description available	0.03	OrthoFinder output from all 47 species
Adi_g074023	HAT14	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aev_g02006	HAT14	HD-ZIP I/II-type transcription factor & original...	0.01	OrthoFinder output from all 47 species
Cba_g70020	HAT14	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
GSVIVT01009274001	HAT22	RNA biosynthesis.transcriptional activation.HB...	0.03	OrthoFinder output from all 47 species
MA_8378650g0010	HAT14	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Pir_g23692	HAT14	HD-ZIP I/II-type transcription factor & original...	0.01	OrthoFinder output from all 47 species
Spa_g29039	HAT14	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Zm00001e002355_P001	HB4, ATHB-4,...	transcription factor (HD-ZIP I/II)	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISS	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	ISS	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008283	cell population proliferation	IMP	Interproscan
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009639	response to red or far red light	None	Extended
BP	GO:0009641	shade avoidance	IEP	Interproscan
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	IMP	Interproscan
BP	GO:0009735	response to cytokinin	IEP	Interproscan
BP	GO:0009826	unidimensional cell growth	IMP	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009890	negative regulation of biosynthetic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010016	shoot system morphogenesis	IMP	Interproscan
BP	GO:0010017	red or far-red light signaling pathway	IEP	Interproscan
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010218	response to far red light	IEP	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0016049	cell growth	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031327	negative regulation of cellular biosynthetic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0042221	response to chemical	None	Extended
MF	GO:0042802	identical protein binding	None	Extended
MF	GO:0042803	protein homodimerization activity	IDA	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IDA	Interproscan
BP	GO:0045892	negative regulation of DNA-templated transcription	IDA	Interproscan
BP	GO:0045934	negative regulation of nucleobase-containing compound metabolic process	None	Extended
MF	GO:0046983	protein dimerization activity	None	Extended
BP	GO:0048364	root development	IMP	Interproscan
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051253	negative regulation of RNA metabolic process	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071214	cellular response to abiotic stimulus	None	Extended
BP	GO:0071478	cellular response to radiation	None	Extended
BP	GO:0071482	cellular response to light stimulus	None	Extended
BP	GO:0071489	cellular response to red or far red light	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0099402	plant organ development	None	Extended
BP	GO:0104004	cellular response to environmental stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1902679	negative regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903507	negative regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000209	protein polyubiquitination	IEP	HCCA
MF	GO:0003712	transcription coregulator activity	IEP	HCCA
MF	GO:0004180	carboxypeptidase activity	IEP	HCCA
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	HCCA
CC	GO:0005773	vacuole	IEP	HCCA
CC	GO:0005789	endoplasmic reticulum membrane	IEP	HCCA
BP	GO:0006084	acetyl-CoA metabolic process	IEP	HCCA
BP	GO:0006637	acyl-CoA metabolic process	IEP	HCCA
BP	GO:0006694	steroid biosynthetic process	IEP	HCCA
BP	GO:0007033	vacuole organization	IEP	HCCA
BP	GO:0007568	aging	IEP	HCCA
BP	GO:0007602	phototransduction	IEP	HCCA
BP	GO:0008202	steroid metabolic process	IEP	HCCA
MF	GO:0008238	exopeptidase activity	IEP	HCCA
BP	GO:0009581	detection of external stimulus	IEP	HCCA
BP	GO:0009582	detection of abiotic stimulus	IEP	HCCA
BP	GO:0009583	detection of light stimulus	IEP	HCCA
BP	GO:0009585	red, far-red light phototransduction	IEP	HCCA
BP	GO:0009611	response to wounding	IEP	HCCA
BP	GO:0009785	blue light signaling pathway	IEP	HCCA
BP	GO:0009804	coumarin metabolic process	IEP	HCCA
BP	GO:0009805	coumarin biosynthetic process	IEP	HCCA
BP	GO:0009825	multidimensional cell growth	IEP	HCCA
BP	GO:0009838	abscission	IEP	HCCA
BP	GO:0009894	regulation of catabolic process	IEP	HCCA
BP	GO:0009896	positive regulation of catabolic process	IEP	HCCA
BP	GO:0009911	positive regulation of flower development	IEP	HCCA
BP	GO:0009954	proximal/distal pattern formation	IEP	HCCA
BP	GO:0010089	xylem development	IEP	HCCA
BP	GO:0010208	pollen wall assembly	IEP	HCCA
BP	GO:0010227	floral organ abscission	IEP	HCCA
BP	GO:0010268	brassinosteroid homeostasis	IEP	HCCA
BP	GO:0010506	regulation of autophagy	IEP	HCCA
BP	GO:0010508	positive regulation of autophagy	IEP	HCCA
BP	GO:0010584	pollen exine formation	IEP	HCCA
BP	GO:0010623	programmed cell death involved in cell development	IEP	HCCA
BP	GO:0010927	cellular component assembly involved in morphogenesis	IEP	HCCA
BP	GO:0012501	programmed cell death	IEP	HCCA
BP	GO:0019287	isopentenyl diphosphate biosynthetic process, mevalonate pathway	IEP	HCCA
BP	GO:0030522	intracellular receptor signaling pathway	IEP	HCCA
BP	GO:0031329	regulation of cellular catabolic process	IEP	HCCA
BP	GO:0031331	positive regulation of cellular catabolic process	IEP	HCCA
BP	GO:0035383	thioester metabolic process	IEP	HCCA
BP	GO:0048102	autophagic cell death	IEP	HCCA
BP	GO:0048439	flower morphogenesis	IEP	HCCA
BP	GO:0048582	positive regulation of post-embryonic development	IEP	HCCA
BP	GO:0048657	anther wall tapetum cell differentiation	IEP	HCCA
BP	GO:0051094	positive regulation of developmental process	IEP	HCCA
BP	GO:0051240	positive regulation of multicellular organismal process	IEP	HCCA
BP	GO:0055088	lipid homeostasis	IEP	HCCA
BP	GO:0060147	regulation of post-transcriptional gene silencing	IEP	HCCA
BP	GO:0060964	regulation of miRNA-mediated gene silencing	IEP	HCCA
BP	GO:0060966	regulation of gene silencing by RNA	IEP	HCCA
MF	GO:0070008	serine-type exopeptidase activity	IEP	HCCA
BP	GO:0071483	cellular response to blue light	IEP	HCCA
BP	GO:1900368	regulation of post-transcriptional gene silencing by RNA	IEP	HCCA
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	HCCA
BP	GO:2000243	positive regulation of reproductive process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006712	HD-ZIP_N	2	107
IPR003106	Leu_zip_homeo	184	218
IPR001356	Homeobox_dom	128	182

External Links

No external refs found!

AT4G16780 (HB-2, ATHB2, ATHB-2, HAT4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation