AT4G13240 (ATROPGEF9, ROPGEF9)

Aliases : ATROPGEF9, ROPGEF9

Description : RHO guanyl-nucleotide exchange factor 9

Gene families : OG0000396 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000396_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G13240

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00109p00064220	ROPGEF8,...	Multi-process regulation.Rop GTPase regulatory...	0.13	OrthoFinder output from all 47 species
AT2G45890	ATROPGEF4, RHS11, ROPGEF4	RHO guanyl-nucleotide exchange factor 4	0.05	OrthoFinder output from all 47 species
AT5G19560	ATROPGEF10, ROPGEF10	ROP uanine nucleotide exchange factor 10	0.03	OrthoFinder output from all 47 species
Adi_g024149	ATROPGEF1, ROPGEF1	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.03	OrthoFinder output from all 47 species
Adi_g117760	ATROPGEF1, ROPGEF1	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.03	OrthoFinder output from all 47 species
Als_g52608	ATROPGEF1, ROPGEF1	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.02	OrthoFinder output from all 47 species
Aop_g08558	ATROPGEF1, ROPGEF1	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.04	OrthoFinder output from all 47 species
Cba_g06514	ATROPGEF1, ROPGEF1	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.05	OrthoFinder output from all 47 species
Ceric.1Z028300.1	ROPGEF7,...	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.03	OrthoFinder output from all 47 species
Ceric.22G052200.1	ROPGEF7,...	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.05	OrthoFinder output from all 47 species
Dac_g00928	ATROPGEF1, ROPGEF1	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.02	OrthoFinder output from all 47 species
Dac_g11182	ROPGEF7, ATROPGEF7	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.02	OrthoFinder output from all 47 species
Dac_g44645	ROPGEF7, ATROPGEF7	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.02	OrthoFinder output from all 47 species
Dcu_g16525	ATROPGEF1, ROPGEF1	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.02	OrthoFinder output from all 47 species
GSVIVT01015369001	ROPGEF8, ATROPGEF8	Multi-process regulation.Rop GTPase regulatory...	0.1	OrthoFinder output from all 47 species
GSVIVT01017070001	ROPGEF12, MEE64,...	Multi-process regulation.Rop GTPase regulatory...	0.1	OrthoFinder output from all 47 species
GSVIVT01036908001	ROPGEF14, ATROPGEF14	Multi-process regulation.Rop GTPase regulatory...	0.03	OrthoFinder output from all 47 species
Gb_24552	ROPGEF14, ATROPGEF14	PRONE-type RopGEF guanine nucleotide exchange factor	0.03	OrthoFinder output from all 47 species
LOC_Os01g48410.1	ATROPGEF9,...	PRONE-type RopGEF guanine nucleotide exchange factor	0.12	OrthoFinder output from all 47 species
LOC_Os01g55520.1	ATROPGEF11,...	PRONE-type RopGEF guanine nucleotide exchange factor	0.09	OrthoFinder output from all 47 species
LOC_Os02g17240.1	ROPGEF8,...	PRONE-type RopGEF guanine nucleotide exchange factor	0.07	OrthoFinder output from all 47 species
LOC_Os05g38000.1	ROPGEF7,...	PRONE-type RopGEF guanine nucleotide exchange factor	0.04	OrthoFinder output from all 47 species
LOC_Os05g48640.1	ROPGEF8,...	PRONE-type RopGEF guanine nucleotide exchange factor	0.06	OrthoFinder output from all 47 species
LOC_Os09g37270.1	ATROPGEF1,...	PRONE-type RopGEF guanine nucleotide exchange factor	0.03	OrthoFinder output from all 47 species
Lfl_g39876	ROPGEF7, ATROPGEF7	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.02	OrthoFinder output from all 47 species
Msp_g08115	ATROPGEF1, ROPGEF1	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.05	OrthoFinder output from all 47 species
Msp_g35304	ROPGEF7, ATROPGEF7	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.03	OrthoFinder output from all 47 species
Nbi_g03092	ATROPGEF1, ROPGEF1	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.03	OrthoFinder output from all 47 species
Nbi_g15696	ATROPGEF1, ROPGEF1	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.05	OrthoFinder output from all 47 species
Sam_g40346	No alias	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.03	OrthoFinder output from all 47 species
Solyc03g120650.4.1	ROPGEF12, MEE64,...	PRONE-type RopGEF guanine nucleotide exchange factor	0.13	OrthoFinder output from all 47 species
Solyc12g007150.3.1	ATROPGEF9,...	PRONE-type RopGEF guanine nucleotide exchange factor	0.02	OrthoFinder output from all 47 species
Solyc12g044270.2.1	ROPGEF12, MEE64,...	PRONE-type RopGEF guanine nucleotide exchange factor	0.12	OrthoFinder output from all 47 species
Zm00001e014205_P002	ROPGEF8,...	PRONE-type RopGEF guanine nucleotide exchange factor	0.1	OrthoFinder output from all 47 species
Zm00001e019750_P001	ROPGEF8,...	PRONE-type RopGEF guanine nucleotide exchange factor	0.11	OrthoFinder output from all 47 species
Zm00001e020182_P002	ATROPGEF9,...	PRONE-type RopGEF guanine nucleotide exchange factor	0.06	OrthoFinder output from all 47 species
Zm00001e024760_P001	ROPGEF8,...	PRONE-type RopGEF guanine nucleotide exchange factor	0.07	OrthoFinder output from all 47 species
Zm00001e026517_P004	ROPGEF8,...	PRONE-type RopGEF guanine nucleotide exchange factor	0.09	OrthoFinder output from all 47 species
Zm00001e034952_P003	ATROPGEF1,...	PRONE-type RopGEF guanine nucleotide exchange factor	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
BP	GO:0001558	regulation of cell growth	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009409	response to cold	None	Extended
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009664	plant-type cell wall organization	None	Extended
BP	GO:0009826	unidimensional cell growth	None	Extended
BP	GO:0009827	plant-type cell wall modification	RCA	Interproscan
BP	GO:0009860	pollen tube growth	RCA	Interproscan
BP	GO:0009932	cell tip growth	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010048	vernalization response	RCA	Interproscan
BP	GO:0010769	regulation of cell morphogenesis involved in differentiation	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022603	regulation of anatomical structure morphogenesis	None	Extended
BP	GO:0022604	regulation of cell morphogenesis	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0040008	regulation of growth	None	Extended
BP	GO:0042545	cell wall modification	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0048588	developmental cell growth	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048638	regulation of developmental growth	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048868	pollen tube development	RCA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051510	regulation of unidimensional cell growth	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080092	regulation of pollen tube growth	IGI	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:2000241	regulation of reproductive process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0004143	diacylglycerol kinase activity	IEP	HCCA
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	HCCA
MF	GO:0005215	transporter activity	IEP	HCCA
MF	GO:0005451	obsolete monoatomic cation:proton antiporter activity	IEP	HCCA
MF	GO:0005484	SNAP receptor activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005516	calmodulin binding	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
CC	GO:0005834	heterotrimeric G-protein complex	IEP	HCCA
CC	GO:0005856	cytoskeleton	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006828	manganese ion transport	IEP	HCCA
BP	GO:0006873	cellular monoatomic ion homeostasis	IEP	HCCA
BP	GO:0006874	cellular calcium ion homeostasis	IEP	HCCA
BP	GO:0006875	cellular metal ion homeostasis	IEP	HCCA
BP	GO:0007186	G protein-coupled receptor signaling pathway	IEP	HCCA
BP	GO:0007205	protein kinase C-activating G protein-coupled receptor signaling pathway	IEP	HCCA
MF	GO:0008324	monoatomic cation transmembrane transporter activity	IEP	HCCA
BP	GO:0010351	lithium ion transport	IEP	HCCA
MF	GO:0015075	monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015081	sodium ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015385	sodium:proton antiporter activity	IEP	HCCA
CC	GO:0015629	actin cytoskeleton	IEP	HCCA
BP	GO:0015691	cadmium ion transport	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
CC	GO:0016324	apical plasma membrane	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
BP	GO:0019725	cellular homeostasis	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	HCCA
BP	GO:0030003	cellular monoatomic cation homeostasis	IEP	HCCA
BP	GO:0030029	actin filament-based process	IEP	HCCA
BP	GO:0030048	actin filament-based movement	IEP	HCCA
MF	GO:0030551	cyclic nucleotide binding	IEP	HCCA
MF	GO:0030674	protein-macromolecule adaptor activity	IEP	HCCA
MF	GO:0030695	GTPase regulator activity	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
BP	GO:0035725	sodium ion transmembrane transport	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
BP	GO:0042592	homeostatic process	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
MF	GO:0044877	protein-containing complex binding	IEP	HCCA
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	HCCA
BP	GO:0048468	cell development	IEP	HCCA
BP	GO:0048878	chemical homeostasis	IEP	HCCA
BP	GO:0050801	monoatomic ion homeostasis	IEP	HCCA
MF	GO:0051015	actin filament binding	IEP	HCCA
BP	GO:0051017	actin filament bundle assembly	IEP	HCCA
MF	GO:0051139	metal cation:proton antiporter activity	IEP	HCCA
BP	GO:0055065	metal ion homeostasis	IEP	HCCA
BP	GO:0055074	calcium ion homeostasis	IEP	HCCA
BP	GO:0055080	monoatomic cation homeostasis	IEP	HCCA
BP	GO:0055082	cellular chemical homeostasis	IEP	HCCA
MF	GO:0060090	molecular adaptor activity	IEP	HCCA
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	HCCA
BP	GO:0061572	actin filament bundle organization	IEP	HCCA
BP	GO:0080147	root hair cell development	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
CC	GO:0098590	plasma membrane region	IEP	HCCA
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:0098662	inorganic cation transmembrane transport	IEP	HCCA
BP	GO:0098771	inorganic ion homeostasis	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0098797	plasma membrane protein complex	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
CC	GO:1905360	GTPase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005512	PRONE_dom	73	423

External Links

No external refs found!

AT4G13240 (ATROPGEF9, ROPGEF9)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation