AT4G09650 (ATPD)


Aliases : ATPD

Description : ATP synthase delta-subunit gene


Gene families : OG0001923 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001923_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G09650

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00232380 ATPD,... Photosynthesis.photophosphorylation.ATP synthase... 0.16 OrthoFinder output from all 47 species
Adi_g040500 ATPD subunit delta of peripheral CF1 subcomplex of ATP... 0.03 OrthoFinder output from all 47 species
Adi_g040501 ATPD subunit delta of peripheral CF1 subcomplex of ATP... 0.04 OrthoFinder output from all 47 species
Aev_g05188 ATPD subunit delta of peripheral CF1 subcomplex of ATP... 0.1 OrthoFinder output from all 47 species
Ala_g16354 ATPD subunit delta of peripheral CF1 subcomplex of ATP... 0.11 OrthoFinder output from all 47 species
Aob_g04089 ATPD subunit delta of peripheral CF1 subcomplex of ATP... 0.06 OrthoFinder output from all 47 species
Aob_g05620 ATPD subunit delta of peripheral CF1 subcomplex of ATP... 0.07 OrthoFinder output from all 47 species
Aop_g01177 ATPD subunit delta of peripheral CF1 subcomplex of ATP... 0.08 OrthoFinder output from all 47 species
Aop_g27621 ATPD subunit delta of peripheral CF1 subcomplex of ATP... 0.02 OrthoFinder output from all 47 species
Aspi01Gene30200.t1 ATPD, Aspi01Gene30200 subunit delta of peripheral CF1 subcomplex of ATP... 0.05 OrthoFinder output from all 47 species
Aspi01Gene41011.t1 ATPD, Aspi01Gene41011 subunit delta of peripheral CF1 subcomplex of ATP... 0.04 OrthoFinder output from all 47 species
Azfi_s0073.g037144 ATPD subunit delta of peripheral CF1 subcomplex of ATP... 0.1 OrthoFinder output from all 47 species
Cba_g12515 ATPD subunit delta of peripheral CF1 subcomplex of ATP... 0.04 OrthoFinder output from all 47 species
Ceric.15G029000.1 ATPD, Ceric.15G029000 subunit delta of peripheral CF1 subcomplex of ATP... 0.1 OrthoFinder output from all 47 species
Ceric.27G011900.1 ATPD, Ceric.27G011900 subunit delta of peripheral CF1 subcomplex of ATP... 0.16 OrthoFinder output from all 47 species
Ceric.36G009700.1 ATPD, Ceric.36G009700 subunit delta of peripheral CF1 subcomplex of ATP... 0.19 OrthoFinder output from all 47 species
Cre11.g467569 ATPD Photosynthesis.photophosphorylation.ATP synthase... 0.02 OrthoFinder output from all 47 species
Dac_g03133 ATPD subunit delta of peripheral CF1 subcomplex of ATP... 0.1 OrthoFinder output from all 47 species
Dac_g05575 ATPD subunit delta of peripheral CF1 subcomplex of ATP... 0.08 OrthoFinder output from all 47 species
Dcu_g00798 ATPD subunit delta of peripheral CF1 subcomplex of ATP... 0.1 OrthoFinder output from all 47 species
Dde_g04263 ATPD subunit delta of peripheral CF1 subcomplex of ATP... 0.09 OrthoFinder output from all 47 species
Ehy_g08260 ATPD subunit delta of peripheral CF1 subcomplex of ATP... 0.12 OrthoFinder output from all 47 species
GSVIVT01001595001 ATPD Photosynthesis.photophosphorylation.ATP synthase... 0.21 OrthoFinder output from all 47 species
Gb_38201 ATPD subunit delta of peripheral CF1 subcomplex of ATP... 0.06 OrthoFinder output from all 47 species
LOC_Os02g51470.3 ATPD, LOC_Os02g51470 subunit delta of peripheral CF1 subcomplex of ATP... 0.14 OrthoFinder output from all 47 species
LOC_Os03g52660.1 LOC_Os03g52660 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g02669 ATPD subunit delta of peripheral CF1 subcomplex of ATP... 0.13 OrthoFinder output from all 47 species
Lfl_g03632 ATPD subunit delta of peripheral CF1 subcomplex of ATP... 0.03 OrthoFinder output from all 47 species
MA_10744g0010 ATPD subunit delta of peripheral CF1 subcomplex of ATP... 0.08 OrthoFinder output from all 47 species
MA_657g0010 ATPD subunit delta of peripheral CF1 subcomplex of ATP... 0.11 OrthoFinder output from all 47 species
Mp3g05790.1 ATPD subunit delta of peripheral CF1 subcomplex of ATP... 0.22 OrthoFinder output from all 47 species
Mp6g06680.1 ATPD subunit delta of peripheral CF1 subcomplex of ATP... 0.04 OrthoFinder output from all 47 species
Msp_g05321 ATPD subunit delta of peripheral CF1 subcomplex of ATP... 0.1 OrthoFinder output from all 47 species
Nbi_g12483 ATPD subunit delta of peripheral CF1 subcomplex of ATP... 0.12 OrthoFinder output from all 47 species
Ore_g18978 ATPD subunit delta of peripheral CF1 subcomplex of ATP... 0.09 OrthoFinder output from all 47 species
Ore_g27681 ATPD subunit delta of peripheral CF1 subcomplex of ATP... 0.06 OrthoFinder output from all 47 species
Pir_g00419 ATPD subunit delta of peripheral CF1 subcomplex of ATP... 0.13 OrthoFinder output from all 47 species
Pnu_g09377 No alias subunit delta of peripheral CF1 subcomplex of ATP... 0.06 OrthoFinder output from all 47 species
Pnu_g09378 No alias subunit delta of peripheral CF1 subcomplex of ATP... 0.07 OrthoFinder output from all 47 species
Pp3c23_6060V3.1 ATPD, Pp3c23_6060 ATP synthase delta-subunit gene 0.04 OrthoFinder output from all 47 species
Ppi_g02890 ATPD subunit delta of peripheral CF1 subcomplex of ATP... 0.1 OrthoFinder output from all 47 species
Ppi_g11373 ATPD subunit delta of peripheral CF1 subcomplex of ATP... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0130.g022065 ATPD subunit delta of peripheral CF1 subcomplex of ATP... 0.03 OrthoFinder output from all 47 species
Sam_g25341 No alias subunit delta of peripheral CF1 subcomplex of ATP... 0.02 OrthoFinder output from all 47 species
Smo128732 No alias Photosynthesis.photophosphorylation.ATP synthase... 0.04 OrthoFinder output from all 47 species
Solyc05g050500.1.1 Solyc05g050500 ATP synthase delta chain, chloroplastic OS=Spinacia... 0.15 OrthoFinder output from all 47 species
Solyc12g056830.1.1 ATPD, Solyc12g056830 subunit delta of peripheral CF1 subcomplex of ATP... 0.21 OrthoFinder output from all 47 species
Spa_g07561 ATPD subunit delta of peripheral CF1 subcomplex of ATP... 0.07 OrthoFinder output from all 47 species
Spa_g07562 ATPD subunit delta of peripheral CF1 subcomplex of ATP... 0.14 OrthoFinder output from all 47 species
Spa_g07563 ATPD subunit delta of peripheral CF1 subcomplex of ATP... 0.14 OrthoFinder output from all 47 species
Tin_g03812 ATPD subunit delta of peripheral CF1 subcomplex of ATP... 0.14 OrthoFinder output from all 47 species
Zm00001e023884_P001 ATPD, Zm00001e023884 subunit delta of peripheral CF1 subcomplex of ATP... 0.13 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000165 MAPK cascade RCA Interproscan
BP GO:0006098 pentose-phosphate shunt RCA Interproscan
BP GO:0006364 rRNA processing RCA Interproscan
BP GO:0006612 protein targeting to membrane RCA Interproscan
BP GO:0009409 response to cold IEP Interproscan
BP GO:0009409 response to cold RCA Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009534 chloroplast thylakoid IDA Interproscan
CC GO:0009535 chloroplast thylakoid membrane IDA Interproscan
CC GO:0009579 thylakoid IDA Interproscan
BP GO:0009595 detection of biotic stimulus RCA Interproscan
BP GO:0009697 salicylic acid biosynthetic process RCA Interproscan
BP GO:0009735 response to cytokinin IDA Interproscan
BP GO:0009772 photosynthetic electron transport in photosystem II IMP Interproscan
BP GO:0009773 photosynthetic electron transport in photosystem I IMP Interproscan
BP GO:0009773 photosynthetic electron transport in photosystem I RCA Interproscan
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway RCA Interproscan
BP GO:0009867 jasmonic acid mediated signaling pathway RCA Interproscan
CC GO:0009941 chloroplast envelope IDA Interproscan
BP GO:0010027 thylakoid membrane organization RCA Interproscan
BP GO:0010200 response to chitin RCA Interproscan
BP GO:0010207 photosystem II assembly RCA Interproscan
CC GO:0010287 plastoglobule IDA Interproscan
BP GO:0010310 regulation of hydrogen peroxide metabolic process RCA Interproscan
CC GO:0010319 stromule IDA Interproscan
BP GO:0010363 regulation of plant-type hypersensitive response RCA Interproscan
BP GO:0015979 photosynthesis IMP Interproscan
BP GO:0015979 photosynthesis RCA Interproscan
BP GO:0015995 chlorophyll biosynthetic process RCA Interproscan
CC GO:0016020 membrane IDA Interproscan
BP GO:0019252 starch biosynthetic process RCA Interproscan
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway RCA Interproscan
BP GO:0019684 photosynthesis, light reaction RCA Interproscan
BP GO:0019760 glucosinolate metabolic process RCA Interproscan
BP GO:0031348 negative regulation of defense response RCA Interproscan
BP GO:0042742 defense response to bacterium IEP Interproscan
BP GO:0042742 defense response to bacterium RCA Interproscan
BP GO:0043900 obsolete regulation of multi-organism process RCA Interproscan
BP GO:0050832 defense response to fungus RCA Interproscan
Type GO Term Name Evidence Source
BP GO:0000023 maltose metabolic process IEP HCCA
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
BP GO:0000272 polysaccharide catabolic process IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003727 single-stranded RNA binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003756 protein disulfide isomerase activity IEP HCCA
MF GO:0003959 NADPH dehydrogenase activity IEP HCCA
MF GO:0005527 macrolide binding IEP HCCA
MF GO:0005528 FK506 binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0005986 sucrose biosynthetic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0006873 cellular monoatomic ion homeostasis IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008187 poly-pyrimidine tract binding IEP HCCA
MF GO:0008266 poly(U) RNA binding IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
CC GO:0009295 nucleoid IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
CC GO:0009503 thylakoid light-harvesting complex IEP HCCA
CC GO:0009508 plastid chromosome IEP HCCA
CC GO:0009517 PSII associated light-harvesting complex II IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009532 plastid stroma IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009543 chloroplast thylakoid lumen IEP HCCA
CC GO:0009570 chloroplast stroma IEP HCCA
BP GO:0009637 response to blue light IEP HCCA
BP GO:0009639 response to red or far red light IEP HCCA
BP GO:0009642 response to light intensity IEP HCCA
BP GO:0009643 photosynthetic acclimation IEP HCCA
BP GO:0009644 response to high light intensity IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009657 plastid organization IEP HCCA
BP GO:0009658 chloroplast organization IEP HCCA
BP GO:0009743 response to carbohydrate IEP HCCA
BP GO:0009744 response to sucrose IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0009902 chloroplast relocation IEP HCCA
BP GO:0009965 leaf morphogenesis IEP HCCA
BP GO:0010103 stomatal complex morphogenesis IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010114 response to red light IEP HCCA
BP GO:0010155 regulation of proton transport IEP HCCA
BP GO:0010196 nonphotochemical quenching IEP HCCA
BP GO:0010205 photoinhibition IEP HCCA
BP GO:0010206 photosystem II repair IEP HCCA
BP GO:0010218 response to far red light IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
CC GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone) IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016108 tetraterpenoid metabolic process IEP HCCA
BP GO:0016109 tetraterpenoid biosynthetic process IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
BP GO:0016116 carotenoid metabolic process IEP HCCA
BP GO:0016117 carotenoid biosynthetic process IEP HCCA
MF GO:0016168 chlorophyll binding IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016630 protochlorophyllide reductase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP HCCA
BP GO:0017014 protein nitrosylation IEP HCCA
BP GO:0018119 peptidyl-cysteine S-nitrosylation IEP HCCA
BP GO:0018198 peptidyl-cysteine modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
BP GO:0019253 reductive pentose-phosphate cycle IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
BP GO:0019685 photosynthesis, dark reaction IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0019750 chloroplast localization IEP HCCA
BP GO:0019758 glycosinolate biosynthetic process IEP HCCA
BP GO:0019761 glucosinolate biosynthetic process IEP HCCA
MF GO:0019840 isoprenoid binding IEP HCCA
BP GO:0030003 cellular monoatomic cation homeostasis IEP HCCA
CC GO:0030076 light-harvesting complex IEP HCCA
BP GO:0030091 protein repair IEP HCCA
CC GO:0030093 chloroplast photosystem I IEP HCCA
CC GO:0030095 chloroplast photosystem II IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
MF GO:0031409 pigment binding IEP HCCA
CC GO:0031977 thylakoid lumen IEP HCCA
CC GO:0031978 plastid thylakoid lumen IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0032879 regulation of localization IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0034285 response to disaccharide IEP HCCA
BP GO:0034762 regulation of transmembrane transport IEP HCCA
BP GO:0034765 regulation of monoatomic ion transmembrane transport IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0042793 plastid transcription IEP HCCA
BP GO:0043085 positive regulation of catalytic activity IEP HCCA
BP GO:0043155 negative regulation of photosynthesis, light reaction IEP HCCA
BP GO:0043269 regulation of monoatomic ion transport IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0044093 positive regulation of molecular function IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044550 secondary metabolite biosynthetic process IEP HCCA
BP GO:0045893 positive regulation of DNA-templated transcription IEP HCCA
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0048564 photosystem I assembly IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
MF GO:0050278 sedoheptulose-bisphosphatase activity IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0050801 monoatomic ion homeostasis IEP HCCA
BP GO:0051049 regulation of transport IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051254 positive regulation of RNA metabolic process IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
BP GO:0051644 plastid localization IEP HCCA
BP GO:0051656 establishment of organelle localization IEP HCCA
BP GO:0051667 establishment of plastid localization IEP HCCA
MF GO:0051738 xanthophyll binding IEP HCCA
BP GO:0055080 monoatomic cation homeostasis IEP HCCA
BP GO:0055082 cellular chemical homeostasis IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0080167 response to karrikin IEP HCCA
BP GO:0090626 plant epidermis morphogenesis IEP HCCA
BP GO:0090698 post-embryonic plant morphogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098807 chloroplast thylakoid membrane protein complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
BP GO:1902680 positive regulation of RNA biosynthetic process IEP HCCA
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1904062 regulation of monoatomic cation transmembrane transport IEP HCCA
BP GO:1905156 negative regulation of photosynthesis IEP HCCA
BP GO:1905392 plant organ morphogenesis IEP HCCA
BP GO:1990066 energy quenching IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR000711 ATPase_OSCP/dsu 52 225
No external refs found!