Description : RNA-binding (RRM/RBD/RNP motifs) family protein
Gene families : OG0030406 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0030406_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
GSVIVT01009091001 | No alias | 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os08g37700.1 | LOC_Os08g37700 | RNA-binding protein CP33, chloroplastic OS=Arabidopsis... | 0.07 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000398 | mRNA splicing, via spliceosome | RCA | Interproscan |
MF | GO:0003676 | nucleic acid binding | ISS | Interproscan |
MF | GO:0003723 | RNA binding | ISS | Interproscan |
CC | GO:0005634 | nucleus | ISM | Interproscan |
BP | GO:0008150 | biological_process | ND | Interproscan |
CC | GO:0009507 | chloroplast | IDA | Interproscan |
CC | GO:0009570 | chloroplast stroma | IDA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
MF | GO:0004820 | glycine-tRNA ligase activity | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
BP | GO:0006426 | glycyl-tRNA aminoacylation | IEP | HCCA |
BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
BP | GO:0007275 | multicellular organism development | IEP | HCCA |
BP | GO:0009657 | plastid organization | IEP | HCCA |
BP | GO:0009658 | chloroplast organization | IEP | HCCA |
BP | GO:0009790 | embryo development | IEP | HCCA |
BP | GO:0009793 | embryo development ending in seed dormancy | IEP | HCCA |
MF | GO:0016874 | ligase activity | IEP | HCCA |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
BP | GO:0043038 | amino acid activation | IEP | HCCA |
BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
BP | GO:0045995 | regulation of embryonic development | IEP | HCCA |
BP | GO:0048481 | plant ovule development | IEP | HCCA |
BP | GO:0050793 | regulation of developmental process | IEP | HCCA |
BP | GO:0051239 | regulation of multicellular organismal process | IEP | HCCA |
BP | GO:0099402 | plant organ development | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
BP | GO:2000026 | regulation of multicellular organismal development | IEP | HCCA |
No external refs found! |