AT3G12270 (PRMT3, ATPRMT3)

Aliases : PRMT3, ATPRMT3

Description : protein arginine methyltransferase 3

Gene families : OG0001088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001088_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G12270

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00036p00239020	ATPRMT11,...	Chromatin organisation.histone modifications.histone...	0.04	OrthoFinder output from all 47 species
Adi_g056068	ATPRMT6, PRMT6	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g078470	ATPRMT11,...	histone methylase *(PRMT1) & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g16146	ATPRMT6, PRMT6	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g01738	ATPRMT6, PRMT6	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g10441	ATPRMT11,...	histone methylase *(PRMT1) & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0006.g009862	ATPRMT11,...	histone methylase *(PRMT1) & original description: CDS=2-1123	0.03	OrthoFinder output from all 47 species
Azfi_s0371.g067130	ATPRMT6, PRMT6	not classified & original description: CDS=379-1746	0.04	OrthoFinder output from all 47 species
Azfi_s0553.g076649	PRMT3, ATPRMT3	ribosomal protein arginine N-methyltransferase *(PRMT3)...	0.05	OrthoFinder output from all 47 species
Ceric.05G067400.1	PRMT3, ATPRMT3,...	ribosomal protein arginine N-methyltransferase *(PRMT3)...	0.07	OrthoFinder output from all 47 species
Ceric.36G007700.1	ATPRMT11,...	histone methylase *(PRMT1) & original description:...	0.05	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000405.18	ATPRMT11,...	Chromatin organisation.histone modifications.histone...	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001049.36	PRMT1A, ATPRMT1A	Probable protein arginine N-methyltransferase 1.2...	0.02	OrthoFinder output from all 47 species
Cre16.g685900	PRMT3, ATPRMT3	Protein biosynthesis.cytosolic ribosome.ribosome...	0.14	OrthoFinder output from all 47 species
Dcu_g01884	ATPRMT6, PRMT6	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g10045	ATPRMT11,...	histone methylase *(PRMT1) & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g11233	PRMT3, ATPRMT3	ribosomal protein arginine N-methyltransferase *(PRMT3)...	0.07	OrthoFinder output from all 47 species
GSVIVT01036648001	PRMT3, ATPRMT3	Protein biosynthesis.cytosolic ribosome.ribosome...	0.17	OrthoFinder output from all 47 species
Gb_03001	ATPRMT6, PRMT6	Probable protein arginine N-methyltransferase 6...	0.05	OrthoFinder output from all 47 species
Gb_15769	ATPRMT11,...	histone methylase (PRMT1)	0.03	OrthoFinder output from all 47 species
Gb_34867	PRMT3, ATPRMT3	ribosomal protein arginine N-methyltransferase (PRMT3)	0.05	OrthoFinder output from all 47 species
LOC_Os04g58060.1	ATPRMT6, PRMT6,...	Probable protein arginine N-methyltransferase 6.1...	0.06	OrthoFinder output from all 47 species
LOC_Os07g44640.1	PRMT3, ATPRMT3,...	ribosomal protein arginine N-methyltransferase (PRMT3)	0.11	OrthoFinder output from all 47 species
LOC_Os09g19560.1	ATPRMT11,...	histone methylase (PRMT1)	0.11	OrthoFinder output from all 47 species
LOC_Os10g34740.1	ATPRMT6, PRMT6,...	Probable protein arginine N-methyltransferase 6.2...	0.02	OrthoFinder output from all 47 species
Len_g22488	PRMT3, ATPRMT3	ribosomal protein arginine N-methyltransferase *(PRMT3)...	0.02	OrthoFinder output from all 47 species
MA_6268g0020	PRMT3, ATPRMT3	Probable protein arginine N-methyltransferase 3 OS=Oryza...	0.07	OrthoFinder output from all 47 species
Mp5g00320.1	ATPRMT11,...	histone methylase (PRMT1)	0.08	OrthoFinder output from all 47 species
Mp5g14740.1	PRMT3, ATPRMT3	ribosomal protein arginine N-methyltransferase (PRMT3)	0.09	OrthoFinder output from all 47 species
Ore_g36048	PRMT3, ATPRMT3	ribosomal protein arginine N-methyltransferase *(PRMT3)...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0088.g018602	ATPRMT11,...	histone methylase *(PRMT1) & original description: CDS=1-1554	0.04	OrthoFinder output from all 47 species
Sam_g09560	No alias	histone methylase *(PRMT1) & original description: none	0.05	OrthoFinder output from all 47 species
Sam_g18393	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g26734	No alias	ribosomal protein arginine N-methyltransferase *(PRMT3)...	0.03	OrthoFinder output from all 47 species
Smo95789	PRMT3, ATPRMT3	Protein biosynthesis.cytosolic ribosome.ribosome...	0.09	OrthoFinder output from all 47 species
Solyc01g096550.3.1	PRMT3, ATPRMT3,...	ribosomal protein arginine N-methyltransferase (PRMT3)	0.14	OrthoFinder output from all 47 species
Solyc07g032240.3.1	ATPRMT11,...	histone methylase (PRMT1)	0.06	OrthoFinder output from all 47 species
Solyc12g008760.3.1	ATPRMT11,...	histone methylase (PRMT1)	0.09	OrthoFinder output from all 47 species
Tin_g05071	ATPRMT11,...	histone methylase *(PRMT1) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e033500_P001	PRMT3, ATPRMT3,...	ribosomal protein arginine N-methyltransferase (PRMT3)	0.16	OrthoFinder output from all 47 species
Zm00001e033907_P001	ATPRMT11,...	histone methylase (PRMT1)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000741	karyogamy	RCA	Interproscan
BP	GO:0001510	RNA methylation	RCA	Interproscan
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
CC	GO:0005829	cytosol	IDA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006220	pyrimidine nucleotide metabolic process	None	Extended
BP	GO:0006221	pyrimidine nucleotide biosynthetic process	None	Extended
BP	GO:0006606	protein import into nucleus	RCA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0006913	nucleocytoplasmic transport	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0006997	nucleus organization	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008168	methyltransferase activity	ISS	Interproscan
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009165	nucleotide biosynthetic process	None	Extended
BP	GO:0009218	pyrimidine ribonucleotide metabolic process	None	Extended
BP	GO:0009220	pyrimidine ribonucleotide biosynthetic process	RCA	Interproscan
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009260	ribonucleotide biosynthetic process	None	Extended
BP	GO:0009451	RNA modification	None	Extended
BP	GO:0009560	embryo sac egg cell differentiation	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
BP	GO:0022412	cellular process involved in reproduction in multicellular organism	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
BP	GO:0032259	methylation	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
BP	GO:0034504	protein localization to nucleus	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0042991	obsolete transcription factor import into nucleus	RCA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046390	ribose phosphate biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048284	organelle fusion	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0051169	nuclear transport	None	Extended
BP	GO:0051170	import into nucleus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0072527	pyrimidine-containing compound metabolic process	None	Extended
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901137	carbohydrate derivative biosynthetic process	None	Extended
BP	GO:1901293	nucleoside phosphate biosynthetic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	IEP	HCCA
CC	GO:0000152	nuclear ubiquitin ligase complex	IEP	HCCA
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0000175	3'-5'-exoribonuclease activity	IEP	HCCA
BP	GO:0000266	mitochondrial fission	IEP	HCCA
BP	GO:0000469	cleavage involved in rRNA processing	IEP	HCCA
BP	GO:0000478	endonucleolytic cleavage involved in rRNA processing	IEP	HCCA
BP	GO:0000957	mitochondrial RNA catabolic process	IEP	HCCA
BP	GO:0000959	mitochondrial RNA metabolic process	IEP	HCCA
BP	GO:0000963	mitochondrial RNA processing	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0004407	histone deacetylase activity	IEP	HCCA
MF	GO:0004527	exonuclease activity	IEP	HCCA
MF	GO:0004532	exoribonuclease activity	IEP	HCCA
MF	GO:0004540	ribonuclease activity	IEP	HCCA
MF	GO:0004654	polyribonucleotide nucleotidyltransferase activity	IEP	HCCA
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
MF	GO:0004826	phenylalanine-tRNA ligase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
CC	GO:0005680	anaphase-promoting complex	IEP	HCCA
CC	GO:0005730	nucleolus	IEP	HCCA
CC	GO:0005732	sno(s)RNA-containing ribonucleoprotein complex	IEP	HCCA
CC	GO:0005834	heterotrimeric G-protein complex	IEP	HCCA
BP	GO:0006405	RNA export from nucleus	IEP	HCCA
BP	GO:0006406	mRNA export from nucleus	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
BP	GO:0006432	phenylalanyl-tRNA aminoacylation	IEP	HCCA
BP	GO:0007005	mitochondrion organization	IEP	HCCA
BP	GO:0008037	cell recognition	IEP	HCCA
MF	GO:0008408	3'-5' exonuclease activity	IEP	HCCA
BP	GO:0009292	horizontal gene transfer	IEP	HCCA
BP	GO:0009294	DNA-mediated transformation	IEP	HCCA
BP	GO:0009553	embryo sac development	IEP	HCCA
BP	GO:0010074	maintenance of meristem identity	IEP	HCCA
BP	GO:0010077	maintenance of inflorescence meristem identity	IEP	HCCA
BP	GO:0010467	gene expression	IEP	HCCA
BP	GO:0015931	nucleobase-containing compound transport	IEP	HCCA
MF	GO:0016796	exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	HCCA
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
MF	GO:0016896	exoribonuclease activity, producing 5'-phosphomonoesters	IEP	HCCA
MF	GO:0019213	deacetylase activity	IEP	HCCA
BP	GO:0019827	stem cell population maintenance	IEP	HCCA
CC	GO:0031461	cullin-RING ubiquitin ligase complex	IEP	HCCA
MF	GO:0033558	protein lysine deacetylase activity	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0048444	floral organ morphogenesis	IEP	HCCA
BP	GO:0048544	recognition of pollen	IEP	HCCA
BP	GO:0050657	nucleic acid transport	IEP	HCCA
BP	GO:0050658	RNA transport	IEP	HCCA
BP	GO:0051028	mRNA transport	IEP	HCCA
BP	GO:0051168	nuclear export	IEP	HCCA
BP	GO:0051236	establishment of RNA localization	IEP	HCCA
BP	GO:0051604	protein maturation	IEP	HCCA
BP	GO:0060321	acceptance of pollen	IEP	HCCA
CC	GO:0080008	Cul4-RING E3 ubiquitin ligase complex	IEP	HCCA
BP	GO:0090305	nucleic acid phosphodiester bond hydrolysis	IEP	HCCA
BP	GO:0090501	RNA phosphodiester bond hydrolysis	IEP	HCCA
BP	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
BP	GO:0098727	maintenance of cell number	IEP	HCCA
BP	GO:0140053	mitochondrial gene expression	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
CC	GO:1905360	GTPase complex	IEP	HCCA
CC	GO:1990234	transferase complex	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!

AT3G12270 (PRMT3, ATPRMT3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation