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  5. AT2G31060

AT2G31060


Description : elongation factor family protein


Gene families : OG0002241 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002241_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G31060

Target Alias Description ECC score Gene Family Method Actions
Adi_g006702 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0225.g058946 No alias not classified & original description: CDS=1-2007 0.02 OrthoFinder output from all 47 species
Azfi_s3264.g115125 No alias not classified & original description: CDS=152-481 0.04 OrthoFinder output from all 47 species
Cre07.g335200 No alias Putative elongation factor TypA-like SVR3, chloroplastic... 0.03 OrthoFinder output from all 47 species
Dcu_g02920 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g10273 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g54910.1 LOC_Os01g54910 Putative elongation factor TypA-like SVR3, chloroplastic... 0.04 OrthoFinder output from all 47 species
Len_g01863 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02041 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10426278g0010 No alias Putative elongation factor TypA-like SVR3, chloroplastic... 0.05 OrthoFinder output from all 47 species
Nbi_g02219 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g32563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g053470.4.1 Solyc07g053470 Putative elongation factor TypA-like SVR3, chloroplastic... 0.06 OrthoFinder output from all 47 species
Zm00001e019839_P002 Zm00001e019839 Putative elongation factor TypA-like SVR3, chloroplastic... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity ISS Interproscan
MF GO:0005525 GTP binding ISS Interproscan
CC GO:0005739 mitochondrion IDA Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0006626 protein targeting to mitochondrion RCA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000740 nuclear membrane fusion IEP HCCA
BP GO:0000741 karyogamy IEP HCCA
MF GO:0004638 phosphoribosylaminoimidazole carboxylase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006188 IMP biosynthetic process IEP HCCA
BP GO:0006189 'de novo' IMP biosynthetic process IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006458 'de novo' protein folding IEP HCCA
BP GO:0006997 nucleus organization IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0007349 cellularization IEP HCCA
BP GO:0008219 cell death IEP HCCA
BP GO:0009123 nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009553 embryo sac development IEP HCCA
BP GO:0009555 pollen development IEP HCCA
BP GO:0009558 embryo sac cellularization IEP HCCA
BP GO:0009560 embryo sac egg cell differentiation IEP HCCA
BP GO:0010197 polar nucleus fusion IEP HCCA
BP GO:0010198 synergid death IEP HCCA
BP GO:0010623 programmed cell death involved in cell development IEP HCCA
BP GO:0012501 programmed cell death IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0046040 IMP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0048229 gametophyte development IEP HCCA
BP GO:0048284 organelle fusion IEP HCCA
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051084 'de novo' post-translational protein folding IEP HCCA
BP GO:0051085 chaperone cofactor-dependent protein refolding IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0061025 membrane fusion IEP HCCA
BP GO:0061077 chaperone-mediated protein folding IEP HCCA
BP GO:0071763 nuclear membrane organization IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090174 organelle membrane fusion IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004161 EFTu-like_2 136 209
IPR000795 T_Tr_GTP-bd_dom 2 112
IPR000640 EFG_V-like 316 399
No external refs found!