AT2G29550 (TUB7)


Aliases : TUB7

Description : tubulin beta-7 chain


Gene families : OG0000152 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000152_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G29550

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00251790 TUB8,... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.06 OrthoFinder output from all 47 species
AMTR_s00009p00255970 TUB8,... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
AMTR_s00029p00190040 TUB8,... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.09 OrthoFinder output from all 47 species
AT5G23860 TUB8 tubulin beta 8 0.04 OrthoFinder output from all 47 species
Adi_g028533 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.06 OrthoFinder output from all 47 species
Adi_g068860 TUB7 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g100349 TUB1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g105533 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Adi_g107584 TUB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g28137 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Ala_g16994 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Ala_g23454 TUB6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g23768 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Ala_g31167 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Als_g10858 TUB8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g10860 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Als_g18460 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Als_g19148 TUB7 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Als_g33099 TUB6 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g54930 TUB7 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.06 OrthoFinder output from all 47 species
Aob_g08895 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Aop_g33014 TUB7 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.07 OrthoFinder output from all 47 species
Aspi01Gene08571.t1 TUB6, Aspi01Gene08571 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Aspi01Gene10198.t1 TUB2, Aspi01Gene10198 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Aspi01Gene35906.t1 TUB2, Aspi01Gene35906 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Cba_g06846 TUB8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06879 TUB6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15536 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Cba_g15537 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Cba_g69323 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Ceric.03G086000.1 TUB2, Ceric.03G086000 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Ceric.04G002000.1 TUB2, Ceric.04G002000 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Ceric.06G048500.1 TUB2, Ceric.06G048500 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Ceric.19G036600.1 TUB6, Ceric.19G036600 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Ceric.30G059900.1 TUB6, Ceric.30G059900 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Ceric.31G054800.1 TUB2, Ceric.31G054800 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.06 OrthoFinder output from all 47 species
Dac_g23831 TUB7 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.12 OrthoFinder output from all 47 species
Dac_g34924 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.09 OrthoFinder output from all 47 species
Dac_g42639 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Dcu_g06899 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Dcu_g08335 TUB7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g13446 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Dcu_g13447 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Dcu_g31278 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Dcu_g45218 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Dcu_g45419 TUB6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019758001 TUB6 Tubulin beta-4 chain OS=Eleusine indica 0.02 OrthoFinder output from all 47 species
GSVIVT01019775001 TUB8 Tubulin beta-8 chain OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01024825001 TUB8 Tubulin beta-8 chain OS=Arabidopsis thaliana 0.17 OrthoFinder output from all 47 species
GSVIVT01025778001 TUB6 Tubulin beta-4 chain OS=Eleusine indica 0.06 OrthoFinder output from all 47 species
GSVIVT01028941001 TUB8 Tubulin beta-8 chain OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
GSVIVT01037405001 TUB2 Tubulin beta-4 chain OS=Eleusine indica 0.03 OrthoFinder output from all 47 species
Gb_15590 TUB2 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.04 OrthoFinder output from all 47 species
Gb_18746 TUB6 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
Gb_25332 TUB2 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.06 OrthoFinder output from all 47 species
LOC_Os01g18050.1 TUB6, LOC_Os01g18050 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.05 OrthoFinder output from all 47 species
LOC_Os01g59150.1 TUB6, LOC_Os01g59150 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder output from all 47 species
LOC_Os02g07060.1 TUB8, LOC_Os02g07060 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.05 OrthoFinder output from all 47 species
LOC_Os03g01530.1 TUB8, LOC_Os03g01530 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder output from all 47 species
LOC_Os05g34170.2 TUB6, LOC_Os05g34170 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder output from all 47 species
LOC_Os06g46000.1 TUB8, LOC_Os06g46000 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder output from all 47 species
Len_g06832 TUB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g08235 TUB6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g08315 TUB7 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Len_g14303 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Len_g18229 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Len_g29601 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Len_g52480 TUB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05282 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Lfl_g05333 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Lfl_g06502 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
MA_10431251g0010 TUB6 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
MA_230579g0010 TUB1 Tubulin beta-8 chain OS=Zea mays (sp|q41785|tbb8_maize : 281.0) 0.02 OrthoFinder output from all 47 species
MA_230579g0020 TUB6 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.04 OrthoFinder output from all 47 species
MA_251404g0010 TUB2 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder output from all 47 species
MA_4935021g0010 TUB6 Tubulin beta-1 chain OS=Zea mays (sp|p18025|tbb1_maize : 189.0) 0.04 OrthoFinder output from all 47 species
MA_55439g0010 TUB2 Tubulin beta-1 chain OS=Solanum tuberosum... 0.05 OrthoFinder output from all 47 species
MA_7436374g0010 TUB6 Tubulin beta-6 chain OS=Zea mays (sp|q41783|tbb6_maize : 276.0) 0.05 OrthoFinder output from all 47 species
MA_87491g0010 TUB2 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.05 OrthoFinder output from all 47 species
MA_9578301g0010 TUB8 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.05 OrthoFinder output from all 47 species
Mp1g20730.1 TUB6 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
Mp2g00620.1 TUB2 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
Mp2g09390.1 TUB8 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.06 OrthoFinder output from all 47 species
Mp2g16780.1 TUB6 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.11 OrthoFinder output from all 47 species
Msp_g08800 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Msp_g25659 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Msp_g29673 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Msp_g41363 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Msp_g45769 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.06 OrthoFinder output from all 47 species
Nbi_g06645 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.12 OrthoFinder output from all 47 species
Nbi_g06968 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.08 OrthoFinder output from all 47 species
Nbi_g23785 TUB8 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g40498 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.09 OrthoFinder output from all 47 species
Pir_g03054 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Pir_g19218 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Pp3c2_26580V3.1 TUB6, Pp3c2_26580 tubulin beta chain 2 0.01 OrthoFinder output from all 47 species
Pp3c5_20340V3.1 TUB2, Pp3c5_20340 tubulin beta chain 2 0.02 OrthoFinder output from all 47 species
Ppi_g10734 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Ppi_g22152 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.07 OrthoFinder output from all 47 species
Ppi_g27529 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Ppi_g63060 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Sam_g08880 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g09510 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.09 OrthoFinder output from all 47 species
Sam_g09511 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.09 OrthoFinder output from all 47 species
Sam_g16934 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Sam_g19878 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Sam_g25916 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.08 OrthoFinder output from all 47 species
Sam_g40899 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Smo164404 TUB6 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Smo23429 TUB2 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Smo408201 TUB8 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Solyc03g025730.3.1 TUB8, Solyc03g025730 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder output from all 47 species
Solyc10g085020.3.1 TUB8, Solyc10g085020 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.05 OrthoFinder output from all 47 species
Solyc10g086760.2.1 TUB8, Solyc10g086760 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder output from all 47 species
Spa_g13732 TUB7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15965 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Spa_g20474 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.06 OrthoFinder output from all 47 species
Spa_g24819 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Spa_g40586 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Spa_g40800 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Spa_g47205 TUB7 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.07 OrthoFinder output from all 47 species
Spa_g48008 TUB8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50619 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Spa_g50620 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.08 OrthoFinder output from all 47 species
Spa_g54478 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Tin_g06951 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Tin_g45513 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.09 OrthoFinder output from all 47 species
Zm00001e000048_P003 TUB2, Zm00001e000048 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005200 structural constituent of cytoskeleton ISS Interproscan
CC GO:0005618 cell wall IDA Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005773 vacuole IDA Interproscan
CC GO:0005794 Golgi apparatus IDA Interproscan
CC GO:0005829 cytosol IDA Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0006094 gluconeogenesis RCA Interproscan
BP GO:0007010 cytoskeleton organization RCA Interproscan
BP GO:0007017 microtubule-based process ISS Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
BP GO:0009651 response to salt stress IEP Interproscan
BP GO:0010075 regulation of meristem growth RCA Interproscan
BP GO:0010498 proteasomal protein catabolic process RCA Interproscan
CC GO:0045298 tubulin complex ISS Interproscan
BP GO:0046686 response to cadmium ion IEP Interproscan
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004693 cyclin-dependent protein serine/threonine kinase activity IEP HCCA
CC GO:0005677 chromatin silencing complex IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006349 regulation of gene expression by genomic imprinting IEP HCCA
BP GO:0007166 cell surface receptor signaling pathway IEP HCCA
BP GO:0007167 enzyme-linked receptor protein signaling pathway IEP HCCA
BP GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0007346 regulation of mitotic cell cycle IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0008283 cell population proliferation IEP HCCA
BP GO:0009266 response to temperature stimulus IEP HCCA
BP GO:0009409 response to cold IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009790 embryo development IEP HCCA
BP GO:0009793 embryo development ending in seed dormancy IEP HCCA
BP GO:0010026 trichome differentiation IEP HCCA
BP GO:0010214 seed coat development IEP HCCA
BP GO:0010376 stomatal complex formation IEP HCCA
BP GO:0010389 regulation of G2/M transition of mitotic cell cycle IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016572 obsolete histone phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
BP GO:0031507 heterochromatin formation IEP HCCA
BP GO:0042023 DNA endoreduplication IEP HCCA
BP GO:0044786 cell cycle DNA replication IEP HCCA
BP GO:0045787 positive regulation of cell cycle IEP HCCA
BP GO:0048316 seed development IEP HCCA
BP GO:0048366 leaf development IEP HCCA
BP GO:0048449 floral organ formation IEP HCCA
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP HCCA
BP GO:0048825 cotyledon development IEP HCCA
BP GO:0048827 phyllome development IEP HCCA
BP GO:0070828 heterochromatin organization IEP HCCA
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP HCCA
MF GO:0097472 cyclin-dependent protein kinase activity IEP HCCA
BP GO:0099402 plant organ development IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP HCCA
BP GO:1902749 regulation of cell cycle G2/M phase transition IEP HCCA
InterPro domains Description Start Stop
IPR003008 Tubulin_FtsZ_GTPase 3 211
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 261 382
No external refs found!