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  5. AT1G49830

AT1G49830


Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein


Gene families : OG0000725 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000725_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G49830

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00167p00019840 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.06 OrthoFinder output from all 47 species
Aev_g30685 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.22G033600.1 Ceric.22G033600 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g33543 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23407 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14173 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010280001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.07 OrthoFinder output from all 47 species
GSVIVT01017050001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
GSVIVT01038142001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
LOC_Os01g13000.1 LOC_Os01g13000 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os05g14010.1 LOC_Os05g14010 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Msp_g15621 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g04901 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g37653 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g44807 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013074 No alias bHLH-type transcription factor & original description: CDS=1-876 0.03 OrthoFinder output from all 47 species
Sam_g16505 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18174 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19157 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g45099 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g107490.2.1 Solyc01g107490 transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
Solyc03g120530.3.1 Solyc03g120530 transcription factor (bHLH) 0.07 OrthoFinder output from all 47 species
Solyc07g020960.3.1 Solyc07g020960 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e005748_P002 Zm00001e005748 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Zm00001e010350_P001 Zm00001e010350 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Zm00001e016395_P001 Zm00001e016395 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e019609_P001 Zm00001e019609 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e027157_P001 Zm00001e027157 transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
Zm00001e034854_P002 Zm00001e034854 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e041465_P001 Zm00001e041465 transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000060 obsolete protein import into nucleus, translocation IEP HCCA
BP GO:0000741 karyogamy IEP HCCA
BP GO:0001763 morphogenesis of a branching structure IEP HCCA
BP GO:0002218 activation of innate immune response IEP HCCA
BP GO:0002252 immune effector process IEP HCCA
BP GO:0002253 activation of immune response IEP HCCA
BP GO:0002684 positive regulation of immune system process IEP HCCA
BP GO:0002833 positive regulation of response to biotic stimulus IEP HCCA
BP GO:0003002 regionalization IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006997 nucleus organization IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009739 response to gibberellin IEP HCCA
BP GO:0009798 axis specification IEP HCCA
BP GO:0009799 specification of symmetry IEP HCCA
BP GO:0009838 abscission IEP HCCA
BP GO:0009855 determination of bilateral symmetry IEP HCCA
BP GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway IEP HCCA
BP GO:0009887 animal organ morphogenesis IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP HCCA
BP GO:0009954 proximal/distal pattern formation IEP HCCA
BP GO:0010014 meristem initiation IEP HCCA
BP GO:0010016 shoot system morphogenesis IEP HCCA
BP GO:0010022 meristem determinacy IEP HCCA
BP GO:0010051 xylem and phloem pattern formation IEP HCCA
BP GO:0010074 maintenance of meristem identity IEP HCCA
BP GO:0010076 maintenance of floral meristem identity IEP HCCA
BP GO:0010077 maintenance of inflorescence meristem identity IEP HCCA
BP GO:0010197 polar nucleus fusion IEP HCCA
BP GO:0010199 organ boundary specification between lateral organs and the meristem IEP HCCA
BP GO:0010219 regulation of vernalization response IEP HCCA
BP GO:0010220 positive regulation of vernalization response IEP HCCA
BP GO:0010223 secondary shoot formation IEP HCCA
BP GO:0010227 floral organ abscission IEP HCCA
BP GO:0010229 inflorescence development IEP HCCA
BP GO:0010254 nectary development IEP HCCA
BP GO:0010346 shoot axis formation IEP HCCA
BP GO:0010434 bract formation IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010582 floral meristem determinacy IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019827 stem cell population maintenance IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
BP GO:0031349 positive regulation of defense response IEP HCCA
BP GO:0032103 positive regulation of response to external stimulus IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0040034 regulation of development, heterochronic IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0045089 positive regulation of innate immune response IEP HCCA
BP GO:0045893 positive regulation of DNA-templated transcription IEP HCCA
BP GO:0045926 negative regulation of growth IEP HCCA
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0046620 regulation of organ growth IEP HCCA
BP GO:0046621 negative regulation of organ growth IEP HCCA
MF GO:0046982 protein heterodimerization activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0048284 organelle fusion IEP HCCA
BP GO:0048438 floral whorl development IEP HCCA
BP GO:0048439 flower morphogenesis IEP HCCA
BP GO:0048441 petal development IEP HCCA
BP GO:0048442 sepal development IEP HCCA
BP GO:0048451 petal formation IEP HCCA
BP GO:0048453 sepal formation IEP HCCA
BP GO:0048498 establishment of petal orientation IEP HCCA
BP GO:0048506 regulation of timing of meristematic phase transition IEP HCCA
BP GO:0048509 regulation of meristem development IEP HCCA
BP GO:0048510 regulation of timing of transition from vegetative to reproductive phase IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0048559 establishment of floral organ orientation IEP HCCA
BP GO:0048560 establishment of anatomical structure orientation IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0048584 positive regulation of response to stimulus IEP HCCA
BP GO:0048640 negative regulation of developmental growth IEP HCCA
BP GO:0048645 animal organ formation IEP HCCA
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0048859 formation of anatomical boundary IEP HCCA
BP GO:0050778 positive regulation of immune response IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051093 negative regulation of developmental process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051241 negative regulation of multicellular organismal process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051254 positive regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065001 specification of axis polarity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080006 internode patterning IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
BP GO:0090428 perianth development IEP HCCA
BP GO:0090567 reproductive shoot system development IEP HCCA
BP GO:0090691 formation of plant organ boundary IEP HCCA
BP GO:0090698 post-embryonic plant morphogenesis IEP HCCA
BP GO:0090707 establishment of plant organ orientation IEP HCCA
BP GO:0098727 maintenance of cell number IEP HCCA
BP GO:0099402 plant organ development IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1902680 positive regulation of RNA biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1905393 plant organ formation IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!