AT1G33240 (AT-GTL1, GTL1, AT-GTL2)

Aliases : AT-GTL1, GTL1, AT-GTL2

Description : GT-2-like 1

Gene families : OG0000556 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000556_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G33240

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00041p00147950	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.Trihelix...	0.03	OrthoFinder output from all 47 species
Ala_g27632	AT-GT2, GT2	Trihelix-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g50192	No alias	Trihelix-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene54632.t1	Aspi01Gene54632	Trihelix-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0305.g063935	AT-GT2, GT2	not classified & original description: CDS=293-1360	0.04	OrthoFinder output from all 47 species
Azfi_s0343.g065731	No alias	Trihelix-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Cba_g27686	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g36900	AT-GTL1, GTL1, AT-GTL2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g55430	No alias	Trihelix-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.35G006300.1	Ceric.35G006300	Trihelix-type transcription factor & original...	0.05	OrthoFinder output from all 47 species
Dcu_g04858	No alias	Trihelix-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g04858	AT-GT2, GT2	Trihelix-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g13661	No alias	Trihelix-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g24833	AT-GT2, GT2	Trihelix-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01019722001	No alias	RNA biosynthesis.transcriptional activation.Trihelix...	0.06	OrthoFinder output from all 47 species
GSVIVT01026588001	No alias	RNA biosynthesis.transcriptional activation.Trihelix...	0.04	OrthoFinder output from all 47 species
GSVIVT01035465001	No alias	RNA biosynthesis.transcriptional activation.Trihelix...	0.03	OrthoFinder output from all 47 species
LOC_Os02g01380.1	AT-GT2, GT2,...	transcription factor (Trihelix)	0.03	OrthoFinder output from all 47 species
LOC_Os03g02240.1	AT-GT2, GT2,...	transcription factor (Trihelix)	0.08	OrthoFinder output from all 47 species
LOC_Os04g45750.1	LOC_Os04g45750	transcription factor (Trihelix)	0.12	OrthoFinder output from all 47 species
LOC_Os10g37240.4	LOC_Os10g37240	Trihelix transcription factor GT-2 OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
Lfl_g19944	No alias	Trihelix-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
MA_10427500g0020	No alias	transcription factor (Trihelix)	0.03	OrthoFinder output from all 47 species
MA_10427500g0030	No alias	Trihelix transcription factor GTL1 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
MA_10433499g0020	AT-GT2, GT2	transcription factor (Trihelix)	0.07	OrthoFinder output from all 47 species
MA_47951g0010	No alias	transcription factor (Trihelix)	0.05	OrthoFinder output from all 47 species
Mp8g08100.1	No alias	transcription factor (Trihelix)	0.03	OrthoFinder output from all 47 species
Msp_g47167	No alias	Trihelix-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g11220	No alias	Trihelix-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g60651	AT-GT2, GT2	Trihelix-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0147.g023173	No alias	Trihelix-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Spa_g05673	No alias	Trihelix-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g06396	AT-GT2, GT2	Trihelix-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e000092_P003	AT-GTL1, GTL1,...	transcription factor (Trihelix)	0.05	OrthoFinder output from all 47 species
Zm00001e004364_P002	Zm00001e004364	transcription factor (Trihelix)	0.05	OrthoFinder output from all 47 species
Zm00001e007383_P001	Zm00001e007383	transcription factor (Trihelix)	0.03	OrthoFinder output from all 47 species
Zm00001e012540_P001	Zm00001e012540	transcription factor (Trihelix)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
BP	GO:0001101	response to acid chemical	None	Extended
BP	GO:0001558	regulation of cell growth	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IDA	Interproscan
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006275	regulation of DNA replication	None	Extended
BP	GO:0006351	DNA-templated transcription	IDA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008156	negative regulation of DNA replication	None	Extended
BP	GO:0008361	regulation of cell size	IMP	Interproscan
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009414	response to water deprivation	IMP	Interproscan
BP	GO:0009415	response to water	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010090	trichome morphogenesis	IMP	Interproscan
BP	GO:0010564	regulation of cell cycle process	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010948	negative regulation of cell cycle process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0030308	negative regulation of cell growth	IMP	Interproscan
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032535	regulation of cellular component size	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
BP	GO:0032875	regulation of DNA endoreduplication	None	Extended
BP	GO:0032876	negative regulation of DNA endoreduplication	IMP	Interproscan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0040008	regulation of growth	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IDA	Interproscan
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0045786	negative regulation of cell cycle	None	Extended
BP	GO:0045926	negative regulation of growth	None	Extended
BP	GO:0045934	negative regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048580	regulation of post-embryonic development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051052	regulation of DNA metabolic process	None	Extended
BP	GO:0051053	negative regulation of DNA metabolic process	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051726	regulation of cell cycle	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090066	regulation of anatomical structure size	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0090329	regulation of DNA-templated DNA replication	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0097659	nucleic acid-templated transcription	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:2000026	regulation of multicellular organismal development	None	Extended
BP	GO:2000038	regulation of stomatal complex development	IMP	Interproscan
BP	GO:2000104	negative regulation of DNA-templated DNA replication	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004650	polygalacturonase activity	IEP	HCCA
CC	GO:0005773	vacuole	IEP	HCCA
CC	GO:0005874	microtubule	IEP	HCCA
CC	GO:0005886	plasma membrane	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0005976	polysaccharide metabolic process	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	HCCA
BP	GO:0006595	polyamine metabolic process	IEP	HCCA
BP	GO:0006598	polyamine catabolic process	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
BP	GO:0008356	asymmetric cell division	IEP	HCCA
BP	GO:0009310	amine catabolic process	IEP	HCCA
BP	GO:0009314	response to radiation	IEP	HCCA
BP	GO:0009410	response to xenobiotic stimulus	IEP	HCCA
BP	GO:0009411	response to UV	IEP	HCCA
BP	GO:0009416	response to light stimulus	IEP	HCCA
CC	GO:0009505	plant-type cell wall	IEP	HCCA
CC	GO:0009531	secondary cell wall	IEP	HCCA
BP	GO:0009606	tropism	IEP	HCCA
BP	GO:0009637	response to blue light	IEP	HCCA
BP	GO:0009638	phototropism	IEP	HCCA
BP	GO:0009639	response to red or far red light	IEP	HCCA
BP	GO:0009664	plant-type cell wall organization	IEP	HCCA
MF	GO:0009672	auxin:proton symporter activity	IEP	HCCA
BP	GO:0009740	gibberellic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009785	blue light signaling pathway	IEP	HCCA
BP	GO:0009825	multidimensional cell growth	IEP	HCCA
BP	GO:0009826	unidimensional cell growth	IEP	HCCA
BP	GO:0009832	plant-type cell wall biogenesis	IEP	HCCA
BP	GO:0009914	hormone transport	IEP	HCCA
BP	GO:0009926	auxin polar transport	IEP	HCCA
BP	GO:0009932	cell tip growth	IEP	HCCA
BP	GO:0009958	positive gravitropism	IEP	HCCA
CC	GO:0009986	cell surface	IEP	HCCA
BP	GO:0010015	root morphogenesis	IEP	HCCA
BP	GO:0010053	root epidermal cell differentiation	IEP	HCCA
BP	GO:0010082	regulation of root meristem growth	IEP	HCCA
BP	GO:0010155	regulation of proton transport	IEP	HCCA
BP	GO:0010162	seed dormancy process	IEP	HCCA
BP	GO:0010218	response to far red light	IEP	HCCA
BP	GO:0010315	auxin export across the plasma membrane	IEP	HCCA
BP	GO:0010476	gibberellin mediated signaling pathway	IEP	HCCA
BP	GO:0010817	regulation of hormone levels	IEP	HCCA
BP	GO:0010928	regulation of auxin mediated signaling pathway	IEP	HCCA
CC	GO:0012506	vesicle membrane	IEP	HCCA
BP	GO:0014070	response to organic cyclic compound	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
BP	GO:0016049	cell growth	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
CC	GO:0016328	lateral plasma membrane	IEP	HCCA
BP	GO:0021700	developmental maturation	IEP	HCCA
BP	GO:0022611	dormancy process	IEP	HCCA
BP	GO:0030154	cell differentiation	IEP	HCCA
BP	GO:0030522	intracellular receptor signaling pathway	IEP	HCCA
BP	GO:0032501	multicellular organismal process	IEP	HCCA
BP	GO:0032879	regulation of localization	IEP	HCCA
BP	GO:0034762	regulation of transmembrane transport	IEP	HCCA
BP	GO:0034765	regulation of monoatomic ion transmembrane transport	IEP	HCCA
BP	GO:0040007	growth	IEP	HCCA
BP	GO:0042398	cellular modified amino acid biosynthetic process	IEP	HCCA
BP	GO:0042402	cellular biogenic amine catabolic process	IEP	HCCA
BP	GO:0042546	cell wall biogenesis	IEP	HCCA
BP	GO:0043269	regulation of monoatomic ion transport	IEP	HCCA
BP	GO:0043473	pigmentation	IEP	HCCA
BP	GO:0043476	pigment accumulation	IEP	HCCA
BP	GO:0043478	pigment accumulation in response to UV light	IEP	HCCA
BP	GO:0043479	pigment accumulation in tissues in response to UV light	IEP	HCCA
BP	GO:0043480	pigment accumulation in tissues	IEP	HCCA
BP	GO:0043481	anthocyanin accumulation in tissues in response to UV light	IEP	HCCA
BP	GO:0044085	cellular component biogenesis	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
BP	GO:0046777	protein autophosphorylation	IEP	HCCA
BP	GO:0048469	cell maturation	IEP	HCCA
BP	GO:0048588	developmental cell growth	IEP	HCCA
BP	GO:0048589	developmental growth	IEP	HCCA
BP	GO:0048609	multicellular organismal reproductive process	IEP	HCCA
BP	GO:0048638	regulation of developmental growth	IEP	HCCA
BP	GO:0048764	trichoblast maturation	IEP	HCCA
BP	GO:0048765	root hair cell differentiation	IEP	HCCA
BP	GO:0048766	root hair initiation	IEP	HCCA
BP	GO:0048767	root hair elongation	IEP	HCCA
BP	GO:0051049	regulation of transport	IEP	HCCA
BP	GO:0051513	regulation of monopolar cell growth	IEP	HCCA
BP	GO:0060560	developmental growth involved in morphogenesis	IEP	HCCA
BP	GO:0060918	auxin transport	IEP	HCCA
BP	GO:0071478	cellular response to radiation	IEP	HCCA
BP	GO:0071482	cellular response to light stimulus	IEP	HCCA
BP	GO:0071483	cellular response to blue light	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071555	cell wall organization	IEP	HCCA
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071695	anatomical structure maturation	IEP	HCCA
MF	GO:0080161	auxin transmembrane transporter activity	IEP	HCCA
BP	GO:0090627	plant epidermal cell differentiation	IEP	HCCA
CC	GO:0099080	supramolecular complex	IEP	HCCA
CC	GO:0099081	supramolecular polymer	IEP	HCCA
CC	GO:0099512	supramolecular fiber	IEP	HCCA
CC	GO:0099513	polymeric cytoskeletal fiber	IEP	HCCA
BP	GO:0140115	export across plasma membrane	IEP	HCCA
BP	GO:0140352	export from cell	IEP	HCCA
BP	GO:1904062	regulation of monoatomic cation transmembrane transport	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!

AT1G33240 (AT-GTL1, GTL1, AT-GTL2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation