AT1G33240 (AT-GTL1, GTL1, AT-GTL2)


Aliases : AT-GTL1, GTL1, AT-GTL2

Description : GT-2-like 1


Gene families : OG0000556 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000556_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G33240

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00147950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.Trihelix... 0.03 OrthoFinder output from all 47 species
Ala_g27632 AT-GT2, GT2 Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g50192 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54632.t1 Aspi01Gene54632 Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0305.g063935 AT-GT2, GT2 not classified & original description: CDS=293-1360 0.04 OrthoFinder output from all 47 species
Azfi_s0343.g065731 No alias Trihelix-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g27686 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g36900 AT-GTL1, GTL1, AT-GTL2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g55430 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.35G006300.1 Ceric.35G006300 Trihelix-type transcription factor & original... 0.05 OrthoFinder output from all 47 species
Dcu_g04858 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04858 AT-GT2, GT2 Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13661 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g24833 AT-GT2, GT2 Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019722001 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.06 OrthoFinder output from all 47 species
GSVIVT01026588001 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.04 OrthoFinder output from all 47 species
GSVIVT01035465001 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.03 OrthoFinder output from all 47 species
LOC_Os02g01380.1 AT-GT2, GT2,... transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
LOC_Os03g02240.1 AT-GT2, GT2,... transcription factor (Trihelix) 0.08 OrthoFinder output from all 47 species
LOC_Os04g45750.1 LOC_Os04g45750 transcription factor (Trihelix) 0.12 OrthoFinder output from all 47 species
LOC_Os10g37240.4 LOC_Os10g37240 Trihelix transcription factor GT-2 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Lfl_g19944 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_10427500g0020 No alias transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
MA_10427500g0030 No alias Trihelix transcription factor GTL1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_10433499g0020 AT-GT2, GT2 transcription factor (Trihelix) 0.07 OrthoFinder output from all 47 species
MA_47951g0010 No alias transcription factor (Trihelix) 0.05 OrthoFinder output from all 47 species
Mp8g08100.1 No alias transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
Msp_g47167 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11220 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60651 AT-GT2, GT2 Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0147.g023173 No alias Trihelix-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g05673 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g06396 AT-GT2, GT2 Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000092_P003 AT-GTL1, GTL1,... transcription factor (Trihelix) 0.05 OrthoFinder output from all 47 species
Zm00001e004364_P002 Zm00001e004364 transcription factor (Trihelix) 0.05 OrthoFinder output from all 47 species
Zm00001e007383_P001 Zm00001e007383 transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
Zm00001e012540_P001 Zm00001e012540 transcription factor (Trihelix) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IDA Interproscan
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006351 DNA-templated transcription IDA Interproscan
BP GO:0008361 regulation of cell size IMP Interproscan
BP GO:0009414 response to water deprivation IMP Interproscan
BP GO:0010090 trichome morphogenesis IMP Interproscan
BP GO:0030308 negative regulation of cell growth IMP Interproscan
BP GO:0032876 negative regulation of DNA endoreduplication IMP Interproscan
MF GO:0043565 sequence-specific DNA binding IDA Interproscan
BP GO:2000038 regulation of stomatal complex development IMP Interproscan
Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
CC GO:0005773 vacuole IEP HCCA
CC GO:0005874 microtubule IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006598 polyamine catabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0008356 asymmetric cell division IEP HCCA
BP GO:0009310 amine catabolic process IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009410 response to xenobiotic stimulus IEP HCCA
BP GO:0009411 response to UV IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
CC GO:0009505 plant-type cell wall IEP HCCA
CC GO:0009531 secondary cell wall IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0009637 response to blue light IEP HCCA
BP GO:0009638 phototropism IEP HCCA
BP GO:0009639 response to red or far red light IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
MF GO:0009672 auxin:proton symporter activity IEP HCCA
BP GO:0009740 gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009785 blue light signaling pathway IEP HCCA
BP GO:0009825 multidimensional cell growth IEP HCCA
BP GO:0009826 unidimensional cell growth IEP HCCA
BP GO:0009832 plant-type cell wall biogenesis IEP HCCA
BP GO:0009914 hormone transport IEP HCCA
BP GO:0009926 auxin polar transport IEP HCCA
BP GO:0009932 cell tip growth IEP HCCA
BP GO:0009958 positive gravitropism IEP HCCA
CC GO:0009986 cell surface IEP HCCA
BP GO:0010015 root morphogenesis IEP HCCA
BP GO:0010053 root epidermal cell differentiation IEP HCCA
BP GO:0010082 regulation of root meristem growth IEP HCCA
BP GO:0010155 regulation of proton transport IEP HCCA
BP GO:0010162 seed dormancy process IEP HCCA
BP GO:0010218 response to far red light IEP HCCA
BP GO:0010315 auxin export across the plasma membrane IEP HCCA
BP GO:0010476 gibberellin mediated signaling pathway IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
BP GO:0010928 regulation of auxin mediated signaling pathway IEP HCCA
CC GO:0012506 vesicle membrane IEP HCCA
BP GO:0014070 response to organic cyclic compound IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016049 cell growth IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
CC GO:0016328 lateral plasma membrane IEP HCCA
BP GO:0021700 developmental maturation IEP HCCA
BP GO:0022611 dormancy process IEP HCCA
BP GO:0030154 cell differentiation IEP HCCA
BP GO:0030522 intracellular receptor signaling pathway IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032879 regulation of localization IEP HCCA
BP GO:0034762 regulation of transmembrane transport IEP HCCA
BP GO:0034765 regulation of monoatomic ion transmembrane transport IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0042402 cellular biogenic amine catabolic process IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0043269 regulation of monoatomic ion transport IEP HCCA
BP GO:0043473 pigmentation IEP HCCA
BP GO:0043476 pigment accumulation IEP HCCA
BP GO:0043478 pigment accumulation in response to UV light IEP HCCA
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP HCCA
BP GO:0043480 pigment accumulation in tissues IEP HCCA
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046777 protein autophosphorylation IEP HCCA
BP GO:0048469 cell maturation IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0048609 multicellular organismal reproductive process IEP HCCA
BP GO:0048638 regulation of developmental growth IEP HCCA
BP GO:0048764 trichoblast maturation IEP HCCA
BP GO:0048765 root hair cell differentiation IEP HCCA
BP GO:0048766 root hair initiation IEP HCCA
BP GO:0048767 root hair elongation IEP HCCA
BP GO:0051049 regulation of transport IEP HCCA
BP GO:0051513 regulation of monopolar cell growth IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
BP GO:0060918 auxin transport IEP HCCA
BP GO:0071478 cellular response to radiation IEP HCCA
BP GO:0071482 cellular response to light stimulus IEP HCCA
BP GO:0071483 cellular response to blue light IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0071695 anatomical structure maturation IEP HCCA
MF GO:0080161 auxin transmembrane transporter activity IEP HCCA
BP GO:0090627 plant epidermal cell differentiation IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
CC GO:0099081 supramolecular polymer IEP HCCA
CC GO:0099512 supramolecular fiber IEP HCCA
CC GO:0099513 polymeric cytoskeletal fiber IEP HCCA
BP GO:0140115 export across plasma membrane IEP HCCA
BP GO:0140352 export from cell IEP HCCA
BP GO:1904062 regulation of monoatomic cation transmembrane transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!