Aliases : MED34, ATRECQ2, RECQL2
Description : RECQ helicase L2
Gene families : OG0000844 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000844_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g020335 | RECQI1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aob_g17774 | MED34, ATRECQ2, RECQL2 | component *(MED34) of MEDIATOR transcription... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g12706 | ATRECQ4A, ATSGS1, RECQ4A | helicase component *(RecQ4A) of RTR Holliday junction... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g20432 | RecQl3, ATRECQ3 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g16228 | ATRECQ4A, ATSGS1, RECQ4A | helicase component *(RecQ4A) of RTR Holliday junction... | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g41947 | MED34, ATRECQ2, RECQL2 | component *(MED34) of MEDIATOR transcription... | 0.02 | OrthoFinder output from all 47 species | |
Solyc07g042010.4.1 | RecQl3, ATRECQ3,... | ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000278 | mitotic cell cycle | RCA | Interproscan |
MF | GO:0005515 | protein binding | IPI | Interproscan |
CC | GO:0005634 | nucleus | ISM | Interproscan |
BP | GO:0006281 | DNA repair | IC | Interproscan |
BP | GO:0006310 | DNA recombination | IC | Interproscan |
BP | GO:0006396 | RNA processing | RCA | Interproscan |
MF | GO:0009378 | four-way junction helicase activity | IDA | Interproscan |
BP | GO:0010413 | glucuronoxylan metabolic process | RCA | Interproscan |
CC | GO:0016592 | mediator complex | IDA | Interproscan |
MF | GO:0043138 | 3'-5' DNA helicase activity | IDA | Interproscan |
BP | GO:0045492 | xylan biosynthetic process | RCA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000003 | reproduction | IEP | HCCA |
BP | GO:0000723 | telomere maintenance | IEP | HCCA |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
MF | GO:0004829 | threonine-tRNA ligase activity | IEP | HCCA |
CC | GO:0005739 | mitochondrion | IEP | HCCA |
BP | GO:0005996 | monosaccharide metabolic process | IEP | HCCA |
BP | GO:0006006 | glucose metabolic process | IEP | HCCA |
BP | GO:0006094 | gluconeogenesis | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
BP | GO:0006435 | threonyl-tRNA aminoacylation | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
BP | GO:0007010 | cytoskeleton organization | IEP | HCCA |
BP | GO:0007059 | chromosome segregation | IEP | HCCA |
BP | GO:0007062 | sister chromatid cohesion | IEP | HCCA |
BP | GO:0007129 | homologous chromosome pairing at meiosis | IEP | HCCA |
BP | GO:0007131 | reciprocal meiotic recombination | IEP | HCCA |
BP | GO:0010212 | response to ionizing radiation | IEP | HCCA |
BP | GO:0010332 | response to gamma radiation | IEP | HCCA |
BP | GO:0010498 | proteasomal protein catabolic process | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
MF | GO:0016874 | ligase activity | IEP | HCCA |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
BP | GO:0019318 | hexose metabolic process | IEP | HCCA |
BP | GO:0019319 | hexose biosynthetic process | IEP | HCCA |
BP | GO:0030163 | protein catabolic process | IEP | HCCA |
BP | GO:0032200 | telomere organization | IEP | HCCA |
BP | GO:0032204 | regulation of telomere maintenance | IEP | HCCA |
BP | GO:0032504 | multicellular organism reproduction | IEP | HCCA |
BP | GO:0033043 | regulation of organelle organization | IEP | HCCA |
BP | GO:0033044 | regulation of chromosome organization | IEP | HCCA |
BP | GO:0035825 | homologous recombination | IEP | HCCA |
BP | GO:0042138 | meiotic DNA double-strand break formation | IEP | HCCA |
BP | GO:0043038 | amino acid activation | IEP | HCCA |
BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
BP | GO:0043247 | telomere maintenance in response to DNA damage | IEP | HCCA |
BP | GO:0045132 | meiotic chromosome segregation | IEP | HCCA |
BP | GO:0046364 | monosaccharide biosynthetic process | IEP | HCCA |
BP | GO:0051052 | regulation of DNA metabolic process | IEP | HCCA |
BP | GO:0051128 | regulation of cellular component organization | IEP | HCCA |
BP | GO:0051276 | chromosome organization | IEP | HCCA |
BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
BP | GO:0061982 | meiosis I cell cycle process | IEP | HCCA |
BP | GO:0070192 | chromosome organization involved in meiotic cell cycle | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
BP | GO:0090305 | nucleic acid phosphodiester bond hydrolysis | IEP | HCCA |
BP | GO:0098813 | nuclear chromosome segregation | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
BP | GO:0140527 | reciprocal homologous recombination | IEP | HCCA |
BP | GO:1903046 | meiotic cell cycle process | IEP | HCCA |
No external refs found! |