AT1G17580 (ATMYA1, XI-1, MYA1)

Aliases : ATMYA1, XI-1, MYA1

Description : myosin 1

Gene families : OG0000203 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000203_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G17580

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00029p00027850	ATVIIIA, VIIIA,...	Cytoskeleton.microfilament network.myosin...	0.04	OrthoFinder output from all 47 species
AMTR_s00146p00059560	ATXIK, XI-17,...	Cytoskeleton.microfilament network.myosin...	0.08	OrthoFinder output from all 47 species
Adi_g055863	XIC, ATXIC	class XI myosin microfilament-based motor protein &...	0.05	OrthoFinder output from all 47 species
Adi_g104758	ATVIIIA, VIIIA	class VIII myosin microfilament-based motor protein &...	0.03	OrthoFinder output from all 47 species
Adi_g111490	ATXIK, XI-17, XIK	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g14850	ATXIK, XI-17, XIK	class XI myosin microfilament-based motor protein &...	0.05	OrthoFinder output from all 47 species
Aev_g20785	XIC, ATXIC	class XI myosin microfilament-based motor protein &...	0.02	OrthoFinder output from all 47 species
Aev_g28544	ATXIK, XI-17, XIK	class XI myosin microfilament-based motor protein &...	0.04	OrthoFinder output from all 47 species
Ala_g02712	ATXIK, XI-17, XIK	class XI myosin microfilament-based motor protein &...	0.07	OrthoFinder output from all 47 species
Ala_g12224	ATXIK, XI-17, XIK	class XI myosin microfilament-based motor protein &...	0.1	OrthoFinder output from all 47 species
Als_g21629	XIC, ATXIC	class XI myosin microfilament-based motor protein &...	0.02	OrthoFinder output from all 47 species
Aob_g14483	ATXIK, XI-17, XIK	class XI myosin microfilament-based motor protein &...	0.05	OrthoFinder output from all 47 species
Aob_g19963	ATXIK, XI-17, XIK	class XI myosin microfilament-based motor protein &...	0.08	OrthoFinder output from all 47 species
Aop_g31823	ATXIK, XI-17, XIK	class XI myosin microfilament-based motor protein &...	0.02	OrthoFinder output from all 47 species
Aspi01Gene03542.t1	XIC, ATXIC,...	class XI myosin microfilament-based motor protein &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene56316.t1	ATXIE, XIE,...	class XI myosin microfilament-based motor protein &...	0.03	OrthoFinder output from all 47 species
Azfi_s0005.g009071	XIC, ATXIC	class XI myosin microfilament-based motor protein &...	0.05	OrthoFinder output from all 47 species
Azfi_s0027.g023600	ATVIIIA, VIIIA	not classified & original description: CDS=1-2967	0.05	OrthoFinder output from all 47 species
Azfi_s0051.g031356	ATVIIIA, VIIIA	class VIII myosin microfilament-based motor protein &...	0.03	OrthoFinder output from all 47 species
Ceric.03G015200.1	ATXIK, XI-17,...	class XI myosin microfilament-based motor protein &...	0.04	OrthoFinder output from all 47 species
Ceric.05G063900.1	ATXIK, XI-17,...	class XI myosin microfilament-based motor protein &...	0.06	OrthoFinder output from all 47 species
Ceric.11G030500.1	XIC, ATXIC,...	class XI myosin microfilament-based motor protein &...	0.05	OrthoFinder output from all 47 species
Ceric.12G036000.1	ATVIIIA, VIIIA,...	class VIII myosin microfilament-based motor protein &...	0.04	OrthoFinder output from all 47 species
Ceric.1Z216100.1	ATXIK, XI-17,...	not classified & original description: pacid=50588658...	0.05	OrthoFinder output from all 47 species
Ceric.22G004800.1	XIC, ATXIC,...	class XI myosin microfilament-based motor protein &...	0.06	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000113.17	XI-16, MYA3,...	Myosin-12 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000189.32	ATVIIIA, VIIIA	Myosin-7 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020614.58	XI-8, XI-B, XIB, ATXIB	Myosin-8 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020614.59	XIF, ATMYO5, ATXIF	Myosin-5 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Dcu_g08993	XIC, ATXIC	class XI myosin microfilament-based motor protein &...	0.05	OrthoFinder output from all 47 species
Dcu_g37414	ATXIK, XI-17, XIK	class XI myosin microfilament-based motor protein &...	0.04	OrthoFinder output from all 47 species
Dde_g03003	ATXIE, XIE	class XI myosin microfilament-based motor protein &...	0.05	OrthoFinder output from all 47 species
Dde_g03503	ATXIK, XI-17, XIK	class XI myosin microfilament-based motor protein &...	0.04	OrthoFinder output from all 47 species
Ehy_g19234	ATXIK, XI-17, XIK	class XI myosin microfilament-based motor protein &...	0.02	OrthoFinder output from all 47 species
Ehy_g21129	ATVIIIA, VIIIA	class VIII myosin microfilament-based motor protein &...	0.06	OrthoFinder output from all 47 species
GSVIVT01014437001	ATMYOS1, ATM4, ATM2	Cytoskeleton.microfilament network.myosin...	0.03	OrthoFinder output from all 47 species
GSVIVT01035479001	XI-15, ATXI-I, XI-I	Cytoskeleton.microfilament network.myosin...	0.04	OrthoFinder output from all 47 species
Gb_22496	ATXIK, XI-17, XIK	class XI myosin microfilament-based motor protein	0.03	OrthoFinder output from all 47 species
Gb_30020	XI-15, ATXI-I, XI-I	class XI myosin microfilament-based motor protein	0.04	OrthoFinder output from all 47 species
Gb_41098	ATXIK, XI-17, XIK	Myosin-17 OS=Arabidopsis thaliana (sp\|f4k5j1\|myo17_arath : 742.0)	0.03	OrthoFinder output from all 47 species
LOC_Os02g53740.2	XI-15, ATXI-I,...	class XI myosin microfilament-based motor protein	0.05	OrthoFinder output from all 47 species
LOC_Os03g48140.1	ATXIK, XI-17,...	class XI myosin microfilament-based motor protein	0.04	OrthoFinder output from all 47 species
LOC_Os10g19860.1	XI-15, ATXI-I,...	class XI myosin microfilament-based motor protein	0.05	OrthoFinder output from all 47 species
LOC_Os10g34710.1	ATVIIIA, VIIIA,...	class VIII myosin microfilament-based motor protein	0.06	OrthoFinder output from all 47 species
Len_g01925	ATXIK, XI-17, XIK	class XI myosin microfilament-based motor protein &...	0.02	OrthoFinder output from all 47 species
Len_g02926	ATXIK, XI-17, XIK	class XI myosin microfilament-based motor protein &...	0.02	OrthoFinder output from all 47 species
Len_g09051	ATVIIIA, VIIIA	class VIII myosin microfilament-based motor protein &...	0.02	OrthoFinder output from all 47 species
Lfl_g03509	ATXIK, XI-17, XIK	class XI myosin microfilament-based motor protein &...	0.05	OrthoFinder output from all 47 species
Lfl_g03510	ATXIK, XI-17, XIK	class XI myosin microfilament-based motor protein &...	0.02	OrthoFinder output from all 47 species
Lfl_g27695	ATVIIIA, VIIIA	class VIII myosin microfilament-based motor protein &...	0.03	OrthoFinder output from all 47 species
MA_10428972g0010	ATXIK, XI-17, XIK	Myosin-11 OS=Arabidopsis thaliana (sp\|f4hwy6\|myo11_arath : 221.0)	0.04	OrthoFinder output from all 47 species
MA_10434653g0010	XI-15, ATXI-I, XI-I	Protein OPAQUE1 OS=Zea mays (sp\|k7u9n8\|op1_maize : 399.0)	0.05	OrthoFinder output from all 47 species
MA_10435018g0010	XI-15, ATXI-I, XI-I	Myosin-15 OS=Arabidopsis thaliana (sp\|q0wpu1\|myo15_arath : 474.0)	0.04	OrthoFinder output from all 47 species
MA_10435698g0010	XIF, ATMYO5, ATXIF	Myosin-12 OS=Arabidopsis thaliana (sp\|f4iru3\|myo12_arath : 312.0)	0.06	OrthoFinder output from all 47 species
Mp3g23480.1	ATVIIIA, VIIIA	class VIII myosin microfilament-based motor protein	0.04	OrthoFinder output from all 47 species
Msp_g02863	ATXIK, XI-17, XIK	class XI myosin microfilament-based motor protein &...	0.03	OrthoFinder output from all 47 species
Nbi_g20512	ATXIK, XI-17, XIK	class XI myosin microfilament-based motor protein &...	0.03	OrthoFinder output from all 47 species
Ore_g16120	ATXIK, XI-17, XIK	class XI myosin microfilament-based motor protein &...	0.05	OrthoFinder output from all 47 species
Ore_g16659	XIC, ATXIC	class XI myosin microfilament-based motor protein &...	0.04	OrthoFinder output from all 47 species
Ore_g36632	ATVIIIA, VIIIA	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g01696	ATXIK, XI-17, XIK	class XI myosin microfilament-based motor protein &...	0.03	OrthoFinder output from all 47 species
Pir_g31394	ATMYOS1, ATM4, ATM2	class VIII myosin microfilament-based motor protein &...	0.03	OrthoFinder output from all 47 species
Pnu_g27827	ATVIIIA, VIIIA	class VIII myosin microfilament-based motor protein &...	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008041	ATVIIIA, VIIIA	not classified & original description: CDS=63-1811	0.04	OrthoFinder output from all 47 species
Sam_g25578	No alias	class XI myosin microfilament-based motor protein &...	0.04	OrthoFinder output from all 47 species
Smo103418	ATVIIIA, VIIIA	Cytoskeleton.microfilament network.myosin...	0.03	OrthoFinder output from all 47 species
Solyc07g041150.4.1	ATXIK, XI-17,...	class XI myosin microfilament-based motor protein	0.05	OrthoFinder output from all 47 species
Solyc08g061500.3.1	XI-15, ATXI-I,...	class XI myosin microfilament-based motor protein	0.06	OrthoFinder output from all 47 species
Spa_g15875	ATVIIIA, VIIIA	class VIII myosin microfilament-based motor protein &...	0.03	OrthoFinder output from all 47 species
Zm00001e019983_P001	ATXIK, XI-17,...	class XI myosin microfilament-based motor protein	0.04	OrthoFinder output from all 47 species
Zm00001e028170_P003	ATXIK, XI-17,...	class XI myosin microfilament-based motor protein	0.04	OrthoFinder output from all 47 species
Zm00001e033368_P001	XI-8, XI-B, XIB,...	class XI myosin microfilament-based motor protein	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003774	cytoskeletal motor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006606	protein import into nucleus	RCA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0006913	nucleocytoplasmic transport	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007062	sister chromatid cohesion	RCA	Interproscan
BP	GO:0007389	pattern specification process	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009606	tropism	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009629	response to gravity	None	Extended
BP	GO:0009630	gravitropism	RCA	Interproscan
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009791	post-embryonic development	IGI	Interproscan
BP	GO:0009880	embryonic pattern specification	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010014	meristem initiation	None	Extended
BP	GO:0010072	primary shoot apical meristem specification	RCA	Interproscan
BP	GO:0010090	trichome morphogenesis	IGI	Interproscan
BP	GO:0010154	fruit development	IGI	Interproscan
BP	GO:0010431	seed maturation	RCA	Interproscan
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	IGI	Interproscan
CC	GO:0016459	myosin complex	ISS	Interproscan
BP	GO:0021700	developmental maturation	None	Extended
BP	GO:0022402	cell cycle process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0030029	actin filament-based process	None	Extended
BP	GO:0030048	actin filament-based movement	RCA	Interproscan
BP	GO:0030048	actin filament-based movement	TAS	Interproscan
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
BP	GO:0034504	protein localization to nucleus	None	Extended
BP	GO:0040007	growth	None	Extended
MF	GO:0042802	identical protein binding	IPI	Interproscan
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0045595	regulation of cell differentiation	RCA	Interproscan
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048438	floral whorl development	None	Extended
BP	GO:0048467	gynoecium development	IGI	Interproscan
BP	GO:0048468	cell development	None	Extended
BP	GO:0048608	reproductive structure development	None	Extended
BP	GO:0048609	multicellular organismal reproductive process	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051169	nuclear transport	None	Extended
BP	GO:0051170	import into nucleus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051276	chromosome organization	None	Extended
BP	GO:0051301	cell division	IGI	Interproscan
BP	GO:0051301	cell division	RCA	Interproscan
BP	GO:0051640	organelle localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051645	Golgi localization	IMP	Interproscan
BP	GO:0051645	Golgi localization	RCA	Interproscan
BP	GO:0051646	mitochondrion localization	IGI	Interproscan
BP	GO:0051646	mitochondrion localization	RCA	Interproscan
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0060151	peroxisome localization	IGI	Interproscan
BP	GO:0060151	peroxisome localization	RCA	Interproscan
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071695	anatomical structure maturation	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended
BP	GO:0090421	embryonic meristem initiation	None	Extended
BP	GO:0090436	leaf pavement cell development	IGI	Interproscan

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000003	reproduction	IEP	HCCA
BP	GO:0000226	microtubule cytoskeleton organization	IEP	HCCA
MF	GO:0000285	1-phosphatidylinositol-3-phosphate 5-kinase activity	IEP	HCCA
BP	GO:0000723	telomere maintenance	IEP	HCCA
BP	GO:0000724	double-strand break repair via homologous recombination	IEP	HCCA
BP	GO:0000725	recombinational repair	IEP	HCCA
BP	GO:0000910	cytokinesis	IEP	HCCA
BP	GO:0000911	cytokinesis by cell plate formation	IEP	HCCA
BP	GO:0000956	nuclear-transcribed mRNA catabolic process	IEP	HCCA
CC	GO:0005829	cytosol	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006302	double-strand break repair	IEP	HCCA
BP	GO:0006310	DNA recombination	IEP	HCCA
BP	GO:0006325	chromatin organization	IEP	HCCA
BP	GO:0006401	RNA catabolic process	IEP	HCCA
BP	GO:0006402	mRNA catabolic process	IEP	HCCA
BP	GO:0006486	protein glycosylation	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
BP	GO:0007015	actin filament organization	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007059	chromosome segregation	IEP	HCCA
BP	GO:0007129	homologous chromosome pairing at meiosis	IEP	HCCA
BP	GO:0007131	reciprocal meiotic recombination	IEP	HCCA
BP	GO:0007155	cell adhesion	IEP	HCCA
BP	GO:0009756	carbohydrate mediated signaling	IEP	HCCA
BP	GO:0009887	animal organ morphogenesis	IEP	HCCA
BP	GO:0009888	tissue development	IEP	HCCA
BP	GO:0010182	sugar mediated signaling pathway	IEP	HCCA
BP	GO:0010212	response to ionizing radiation	IEP	HCCA
BP	GO:0010332	response to gamma radiation	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010638	positive regulation of organelle organization	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
MF	GO:0016307	phosphatidylinositol phosphate kinase activity	IEP	HCCA
BP	GO:0019439	aromatic compound catabolic process	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
BP	GO:0032200	telomere organization	IEP	HCCA
BP	GO:0032204	regulation of telomere maintenance	IEP	HCCA
BP	GO:0032504	multicellular organism reproduction	IEP	HCCA
BP	GO:0033043	regulation of organelle organization	IEP	HCCA
BP	GO:0033044	regulation of chromosome organization	IEP	HCCA
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	HCCA
BP	GO:0035825	homologous recombination	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0042138	meiotic DNA double-strand break formation	IEP	HCCA
BP	GO:0043247	telomere maintenance in response to DNA damage	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
BP	GO:0043687	post-translational protein modification	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	HCCA
BP	GO:0045010	actin nucleation	IEP	HCCA
BP	GO:0045132	meiotic chromosome segregation	IEP	HCCA
BP	GO:0046700	heterocycle catabolic process	IEP	HCCA
BP	GO:0048366	leaf development	IEP	HCCA
BP	GO:0048825	cotyledon development	IEP	HCCA
BP	GO:0048827	phyllome development	IEP	HCCA
BP	GO:0051052	regulation of DNA metabolic process	IEP	HCCA
BP	GO:0051128	regulation of cellular component organization	IEP	HCCA
BP	GO:0051130	positive regulation of cellular component organization	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0061982	meiosis I cell cycle process	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA
BP	GO:0070192	chromosome organization involved in meiotic cell cycle	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
BP	GO:0090305	nucleic acid phosphodiester bond hydrolysis	IEP	HCCA
BP	GO:0097435	supramolecular fiber organization	IEP	HCCA
BP	GO:0098813	nuclear chromosome segregation	IEP	HCCA
BP	GO:0140527	reciprocal homologous recombination	IEP	HCCA
BP	GO:1901361	organic cyclic compound catabolic process	IEP	HCCA
BP	GO:1903046	meiotic cell cycle process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001609	Myosin_head_motor_dom	61	717
IPR000048	IQ_motif_EF-hand-BS	734	753
IPR000048	IQ_motif_EF-hand-BS	756	773
IPR000048	IQ_motif_EF-hand-BS	853	872
IPR000048	IQ_motif_EF-hand-BS	782	800
IPR000048	IQ_motif_EF-hand-BS	829	848
IPR004009	Myosin_N	9	45
IPR002710	Dilute_dom	1338	1442

External Links

No external refs found!

AT1G17580 (ATMYA1, XI-1, MYA1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation