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  5. AT1G13060

AT1G13060 (PBE1)


Aliases : PBE1

Description : 20S proteasome beta subunit E1


Gene families : OG0004761 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004761_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G13060

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00083100 evm_27.TU.AmTr_v1... Protein degradation.26S proteasome.20S core... 0.04 OrthoFinder output from all 47 species
Adi_g022653 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Aev_g09083 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.07 OrthoFinder output from all 47 species
Ala_g01174 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Als_g01614 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Aop_g00419 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.07 OrthoFinder output from all 47 species
Azfi_s0001.g000499 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Ceric.28G031800.1 Ceric.28G031800 beta-type-5 component *(PBE) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020554.44 No alias Protein degradation.26S proteasome.20S core... 0.13 OrthoFinder output from all 47 species
Cre10.g461950 No alias Protein degradation.26S proteasome.20S core... 0.19 OrthoFinder output from all 47 species
Dcu_g03476 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Ehy_g16817 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Gb_01835 No alias component beta type-5 of 26S proteasome 0.05 OrthoFinder output from all 47 species
LOC_Os06g06030.1 LOC_Os06g06030 component beta type-5 of 26S proteasome 0.12 OrthoFinder output from all 47 species
Len_g05178 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.06 OrthoFinder output from all 47 species
Lfl_g12238 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.06 OrthoFinder output from all 47 species
MA_2177g0010 PBE1 component beta type-5 of 26S proteasome 0.06 OrthoFinder output from all 47 species
MA_5918g0010 PBE1 component beta type-5 of 26S proteasome 0.04 OrthoFinder output from all 47 species
Mp2g06230.1 No alias component beta type-5 of 26S proteasome 0.08 OrthoFinder output from all 47 species
Msp_g07676 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Nbi_g43610 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.08 OrthoFinder output from all 47 species
Pir_g00866 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Pp3c11_2970V3.1 Pp3c11_2970 N-terminal nucleophile aminohydrolases (Ntn hydrolases)... 0.01 OrthoFinder output from all 47 species
Sam_g14103 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Smo270977 No alias Protein degradation.26S proteasome.20S core... 0.04 OrthoFinder output from all 47 species
Solyc05g056160.3.1 Solyc05g056160 component beta type-5 of 26S proteasome 0.07 OrthoFinder output from all 47 species
Spa_g02376 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.08 OrthoFinder output from all 47 species
Spa_g05432 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Spa_g44565 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Tin_g02565 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.09 OrthoFinder output from all 47 species
Zm00001e036472_P001 Zm00001e036472 component beta type-5 of 26S proteasome 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005839 proteasome core complex TAS Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process TAS Interproscan
MF GO:0008233 peptidase activity ISS Interproscan
BP GO:0046686 response to cadmium ion IEP Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0000904 cell morphogenesis involved in differentiation IEP HCCA
BP GO:0000913 preprophase band assembly IEP HCCA
BP GO:0001558 regulation of cell growth IEP HCCA
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP HCCA
CC GO:0005635 nuclear envelope IEP HCCA
CC GO:0005747 mitochondrial respiratory chain complex I IEP HCCA
CC GO:0005774 vacuolar membrane IEP HCCA
CC GO:0005819 spindle IEP HCCA
CC GO:0005829 cytosol IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006261 DNA-templated DNA replication IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006635 fatty acid beta-oxidation IEP HCCA
BP GO:0006833 water transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006970 response to osmotic stress IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP HCCA
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
BP GO:0009266 response to temperature stimulus IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009404 toxin metabolic process IEP HCCA
BP GO:0009407 toxin catabolic process IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
CC GO:0009524 phragmoplast IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009646 response to absence of light IEP HCCA
BP GO:0009647 skotomorphogenesis IEP HCCA
BP GO:0009651 response to salt stress IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009735 response to cytokinin IEP HCCA
BP GO:0009791 post-embryonic development IEP HCCA
BP GO:0009853 photorespiration IEP HCCA
BP GO:0009908 flower development IEP HCCA
BP GO:0009962 regulation of flavonoid biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010043 response to zinc ion IEP HCCA
BP GO:0010090 trichome morphogenesis IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016049 cell growth IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
BP GO:0019748 secondary metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022603 regulation of anatomical structure morphogenesis IEP HCCA
BP GO:0022604 regulation of cell morphogenesis IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0030865 cortical cytoskeleton organization IEP HCCA
CC GO:0030964 NADH dehydrogenase complex IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0031537 regulation of anthocyanin metabolic process IEP HCCA
BP GO:0031540 regulation of anthocyanin biosynthetic process IEP HCCA
CC GO:0031967 organelle envelope IEP HCCA
CC GO:0031975 envelope IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
BP GO:0035966 response to topologically incorrect protein IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0042023 DNA endoreduplication IEP HCCA
BP GO:0042044 fluid transport IEP HCCA
BP GO:0043090 amino acid import IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0044786 cell cycle DNA replication IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
CC GO:0045271 respiratory chain complex I IEP HCCA
MF GO:0045309 protein phosphorylated amino acid binding IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048366 leaf development IEP HCCA
BP GO:0048367 shoot system development IEP HCCA
BP GO:0048469 cell maturation IEP HCCA
BP GO:0048528 post-embryonic root development IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0048638 regulation of developmental growth IEP HCCA
BP GO:0048731 system development IEP HCCA
BP GO:0048764 trichoblast maturation IEP HCCA
BP GO:0048765 root hair cell differentiation IEP HCCA
BP GO:0048767 root hair elongation IEP HCCA
BP GO:0048825 cotyledon development IEP HCCA
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
MF GO:0051219 phosphoprotein binding IEP HCCA
BP GO:0051302 regulation of cell division IEP HCCA
BP GO:0051510 regulation of unidimensional cell growth IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0051788 response to misfolded protein IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
BP GO:0080129 proteasome core complex assembly IEP HCCA
BP GO:0090567 reproductive shoot system development IEP HCCA
BP GO:0090696 post-embryonic plant organ development IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
BP GO:0098754 detoxification IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 56 236
No external refs found!