AT1G04170 (EIF2 GAMMA)

Aliases : EIF2 GAMMA

Description : eukaryotic translation initiation factor 2 gamma subunit

Gene families : OG0003347 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003347_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G04170

Target	Alias	Description	ECC score	Gene Family Method
Aev_g07804	EIF2 GAMMA	component *(eIF2-gamma) of eIF2 Met-tRNA binding factor...	0.02	OrthoFinder output from all 47 species
Als_g11163	EIF2 GAMMA	component *(eIF2-gamma) of eIF2 Met-tRNA binding factor...	0.04	OrthoFinder output from all 47 species
Azfi_s0378.g067321	EIF2 GAMMA	component *(eIF2-gamma) of eIF2 Met-tRNA binding factor...	0.07	OrthoFinder output from all 47 species
Ceric.1Z015400.1	EIF2 GAMMA,...	component *(eIF2-gamma) of eIF2 Met-tRNA binding factor...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021433.27	EIF2 GAMMA	Protein biosynthesis.translation...	0.03	OrthoFinder output from all 47 species
Cre02.g098450	EIF2 GAMMA	Protein biosynthesis.translation...	0.04	OrthoFinder output from all 47 species
Dac_g29798	EIF2 GAMMA	component *(eIF2-gamma) of eIF2 Met-tRNA binding factor...	0.05	OrthoFinder output from all 47 species
Dcu_g01452	EIF2 GAMMA	component *(eIF2-gamma) of eIF2 Met-tRNA binding factor...	0.09	OrthoFinder output from all 47 species
Ehy_g12306	EIF2 GAMMA	component *(eIF2-gamma) of eIF2 Met-tRNA binding factor...	0.02	OrthoFinder output from all 47 species
GSVIVT01026269001	EIF2 GAMMA	Protein biosynthesis.translation...	0.04	OrthoFinder output from all 47 species
LOC_Os12g07740.1	EIF2 GAMMA,...	component eIF2-gamma of eIF2 Met-tRNA binding factor complex	0.07	OrthoFinder output from all 47 species
LOC_Os12g41400.1	EIF2 GAMMA,...	component eIF2-gamma of eIF2 Met-tRNA binding factor complex	0.09	OrthoFinder output from all 47 species
Len_g28086	EIF2 GAMMA	component *(eIF2-gamma) of eIF2 Met-tRNA binding factor...	0.02	OrthoFinder output from all 47 species
Mp1g04790.1	EIF2 GAMMA	component eIF2-gamma of eIF2 Met-tRNA binding factor complex	0.03	OrthoFinder output from all 47 species
Nbi_g00858	EIF2 GAMMA	component *(eIF2-gamma) of eIF2 Met-tRNA binding factor...	0.04	OrthoFinder output from all 47 species
Pp3c7_5020V3.1	EIF2 GAMMA, Pp3c7_5020	eukaryotic translation initiation factor 2 gamma subunit	0.01	OrthoFinder output from all 47 species
Smo172686	EIF2 GAMMA	Protein biosynthesis.translation...	0.03	OrthoFinder output from all 47 species
Solyc05g054310.4.1	EIF2 GAMMA,...	component eIF2-gamma of eIF2 Met-tRNA binding factor complex	0.06	OrthoFinder output from all 47 species
Solyc12g099470.2.1	EIF2 GAMMA,...	component eIF2-gamma of eIF2 Met-tRNA binding factor complex	0.05	OrthoFinder output from all 47 species
Spa_g18548	EIF2 GAMMA	component *(eIF2-gamma) of eIF2 Met-tRNA binding factor...	0.03	OrthoFinder output from all 47 species
Spa_g41801	EIF2 GAMMA	component *(eIF2-gamma) of eIF2 Met-tRNA binding factor...	0.04	OrthoFinder output from all 47 species
Zm00001e010573_P001	EIF2 GAMMA,...	component eIF2-gamma of eIF2 Met-tRNA binding factor complex	0.11	OrthoFinder output from all 47 species
Zm00001e035274_P001	EIF2 GAMMA,...	component eIF2-gamma of eIF2 Met-tRNA binding factor complex	0.11	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003743	translation initiation factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
CC	GO:0005829	cytosol	IDA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006220	pyrimidine nucleotide metabolic process	None	Extended
BP	GO:0006221	pyrimidine nucleotide biosynthetic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008135	translation factor activity, RNA binding	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009165	nucleotide biosynthetic process	None	Extended
BP	GO:0009218	pyrimidine ribonucleotide metabolic process	None	Extended
BP	GO:0009220	pyrimidine ribonucleotide biosynthetic process	RCA	Interproscan
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009260	ribonucleotide biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
BP	GO:0046390	ribose phosphate biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072527	pyrimidine-containing compound metabolic process	None	Extended
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901137	carbohydrate derivative biosynthetic process	None	Extended
BP	GO:1901293	nucleoside phosphate biosynthetic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0000175	3'-5'-exoribonuclease activity	IEP	HCCA
BP	GO:0001510	RNA methylation	IEP	HCCA
MF	GO:0004518	nuclease activity	IEP	HCCA
MF	GO:0004527	exonuclease activity	IEP	HCCA
MF	GO:0004532	exoribonuclease activity	IEP	HCCA
MF	GO:0004540	ribonuclease activity	IEP	HCCA
MF	GO:0004588	orotate phosphoribosyltransferase activity	IEP	HCCA
MF	GO:0004590	orotidine-5'-phosphate decarboxylase activity	IEP	HCCA
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
MF	GO:0004826	phenylalanine-tRNA ligase activity	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0005996	monosaccharide metabolic process	IEP	HCCA
BP	GO:0006006	glucose metabolic process	IEP	HCCA
BP	GO:0006094	gluconeogenesis	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
BP	GO:0006432	phenylalanyl-tRNA aminoacylation	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
BP	GO:0006606	protein import into nucleus	IEP	HCCA
BP	GO:0006913	nucleocytoplasmic transport	IEP	HCCA
BP	GO:0007010	cytoskeleton organization	IEP	HCCA
MF	GO:0008408	3'-5' exonuclease activity	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0009116	nucleoside metabolic process	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
BP	GO:0010022	meristem determinacy	IEP	HCCA
BP	GO:0010025	wax biosynthetic process	IEP	HCCA
BP	GO:0010038	response to metal ion	IEP	HCCA
BP	GO:0010043	response to zinc ion	IEP	HCCA
BP	GO:0010166	wax metabolic process	IEP	HCCA
BP	GO:0010498	proteasomal protein catabolic process	IEP	HCCA
BP	GO:0010582	floral meristem determinacy	IEP	HCCA
BP	GO:0016036	cellular response to phosphate starvation	IEP	HCCA
BP	GO:0016051	carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
MF	GO:0016763	pentosyltransferase activity	IEP	HCCA
MF	GO:0016796	exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
MF	GO:0016896	exoribonuclease activity, producing 5'-phosphomonoesters	IEP	HCCA
BP	GO:0019318	hexose metabolic process	IEP	HCCA
BP	GO:0019319	hexose biosynthetic process	IEP	HCCA
BP	GO:0030163	protein catabolic process	IEP	HCCA
BP	GO:0032259	methylation	IEP	HCCA
BP	GO:0034504	protein localization to nucleus	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043414	macromolecule methylation	IEP	HCCA
BP	GO:0044283	small molecule biosynthetic process	IEP	HCCA
BP	GO:0046364	monosaccharide biosynthetic process	IEP	HCCA
BP	GO:0046686	response to cadmium ion	IEP	HCCA
BP	GO:0051169	nuclear transport	IEP	HCCA
BP	GO:0051170	import into nucleus	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
BP	GO:1901565	organonitrogen compound catabolic process	IEP	HCCA
BP	GO:1901568	fatty acid derivative metabolic process	IEP	HCCA
BP	GO:1901570	fatty acid derivative biosynthetic process	IEP	HCCA
BP	GO:1901657	glycosyl compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000795	T_Tr_GTP-bd_dom	33	237
IPR004161	EFTu-like_2	269	351
IPR015256	eIF2g_C	363	452

External Links

No external refs found!

AT1G04170 (EIF2 GAMMA)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation