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  5. Pnu_g15458

Pnu_g15458


Description : not classified & original description: none


Gene families : OG0000394 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000394_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g15458

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00265860 evm_27.TU.AmTr_v1... Protein FLX-like 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00101p00119280 evm_27.TU.AmTr_v1... Protein FLX-like 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g057285 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g079468 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g115133 No alias component *(FLX) of FRI-C transcription effector complex... 0.03 OrthoFinder output from all 47 species
Adi_g117588 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04844 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08549 No alias component *(FLX) of FRI-C transcription effector complex... 0.03 OrthoFinder output from all 47 species
Als_g22232 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06272 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.15G054300.1 Ceric.15G054300 not classified & original description: pacid=50639834... 0.03 OrthoFinder output from all 47 species
Dac_g12870 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01021834001 No alias Protein FLX-like 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Len_g15202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g30014 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g06429 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29329 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g32006 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g37532 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e024097_P001 Zm00001e024097 Protein FLX-like 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e041078_P007 Zm00001e041078 Protein FLX-like 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!