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  5. Pnu_g14367

Pnu_g14367 (CHL)


Aliases : CHL

Description : regulatory protein lipocalin *(LCNP) of non-photochemical quenching & original description: none


Gene families : OG0007981 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007981_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g14367
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
Adi_g001139 CHL regulatory protein lipocalin *(LCNP) of... 0.04 OrthoFinder output from all 47 species
Aob_g04060 CHL regulatory protein lipocalin *(LCNP) of... 0.03 OrthoFinder output from all 47 species
Ehy_g02187 CHL regulatory protein lipocalin *(LCNP) of... 0.03 OrthoFinder output from all 47 species
Gb_16780 CHL LCNP non-photochemical quenching regulator lipocalin 0.04 OrthoFinder output from all 47 species
LOC_Os04g53490.1 CHL, LOC_Os04g53490 LCNP non-photochemical quenching regulator lipocalin 0.02 OrthoFinder output from all 47 species
MA_11407g0010 CHL LCNP non-photochemical quenching regulator lipocalin 0.05 OrthoFinder output from all 47 species
Mp4g07530.1 CHL LCNP non-photochemical quenching regulator lipocalin 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0125.g021654 CHL regulatory protein lipocalin *(LCNP) of... 0.04 OrthoFinder output from all 47 species
Smo98590 CHL Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000566 Lipocln_cytosolic_FA-bd_dom 130 290
No external refs found!