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  5. Pnu_g14012

Pnu_g14012


Description : regulatory protein *(SOQ1) of non-photochemical quenching & original description: none


Gene families : OG0003626 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003626_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g14012
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AT1G56500 No alias haloacid dehalogenase-like hydrolase family protein 0.09 OrthoFinder output from all 47 species
Adi_g021878 No alias regulatory protein *(SOQ1) of non-photochemical... 0.04 OrthoFinder output from all 47 species
Aev_g14013 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g09026 No alias regulatory protein *(SOQ1) of non-photochemical... 0.05 OrthoFinder output from all 47 species
Aob_g13340 No alias regulatory protein *(SOQ1) of non-photochemical... 0.03 OrthoFinder output from all 47 species
Cba_g31907 No alias regulatory protein *(SOQ1) of non-photochemical... 0.05 OrthoFinder output from all 47 species
Ceric.02G025300.1 Ceric.02G025300 regulatory protein *(SOQ1) of non-photochemical... 0.04 OrthoFinder output from all 47 species
Ceric.06G023000.1 Ceric.06G023000 regulatory protein *(SOQ1) of non-photochemical... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001339.10 No alias Protein SUPPRESSOR OF QUENCHING 1, chloroplastic... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020629.84 No alias Protein SUPPRESSOR OF QUENCHING 1, chloroplastic... 0.02 OrthoFinder output from all 47 species
Cre13.g586050 No alias Protein SUPPRESSOR OF QUENCHING 1, chloroplastic... 0.01 OrthoFinder output from all 47 species
Dac_g07066 No alias regulatory protein *(SOQ1) of non-photochemical... 0.03 OrthoFinder output from all 47 species
Dcu_g46221 No alias regulatory protein *(SOQ1) of non-photochemical... 0.04 OrthoFinder output from all 47 species
Dde_g18494 No alias regulatory protein *(SOQ1) of non-photochemical... 0.07 OrthoFinder output from all 47 species
Ehy_g18146 No alias regulatory protein *(SOQ1) of non-photochemical... 0.03 OrthoFinder output from all 47 species
GSVIVT01031253001 No alias Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder output from all 47 species
Gb_14671 No alias SOQ1 non-photochemical quenching regulator protein 0.05 OrthoFinder output from all 47 species
LOC_Os03g19760.1 LOC_Os03g19760 SOQ1 non-photochemical quenching regulator protein 0.06 OrthoFinder output from all 47 species
Len_g47037 No alias regulatory protein *(SOQ1) of non-photochemical... 0.05 OrthoFinder output from all 47 species
Lfl_g10265 No alias regulatory protein *(SOQ1) of non-photochemical... 0.05 OrthoFinder output from all 47 species
MA_10184459g0010 No alias SOQ1 non-photochemical quenching regulator protein 0.03 OrthoFinder output from all 47 species
MA_129620g0010 No alias Protein SUPPRESSOR OF QUENCHING 1, chloroplastic... 0.03 OrthoFinder output from all 47 species
Mp5g22510.1 No alias SOQ1 non-photochemical quenching regulator protein 0.06 OrthoFinder output from all 47 species
Msp_g13160 No alias regulatory protein *(SOQ1) of non-photochemical... 0.04 OrthoFinder output from all 47 species
Nbi_g39429 No alias regulatory protein *(SOQ1) of non-photochemical... 0.03 OrthoFinder output from all 47 species
Ore_g09927 No alias regulatory protein *(SOQ1) of non-photochemical... 0.07 OrthoFinder output from all 47 species
Pir_g20017 No alias regulatory protein *(SOQ1) of non-photochemical... 0.05 OrthoFinder output from all 47 species
Ppi_g08248 No alias regulatory protein *(SOQ1) of non-photochemical... 0.08 OrthoFinder output from all 47 species
Sam_g50621 No alias regulatory protein *(SOQ1) of non-photochemical... 0.03 OrthoFinder output from all 47 species
Smo79954 No alias Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
Solyc01g100650.3.1 Solyc01g100650 SOQ1 non-photochemical quenching regulator protein 0.03 OrthoFinder output from all 47 species
Spa_g16040 No alias regulatory protein *(SOQ1) of non-photochemical... 0.06 OrthoFinder output from all 47 species
Tin_g46320 No alias regulatory protein *(SOQ1) of non-photochemical... 0.04 OrthoFinder output from all 47 species
Zm00001e001473_P001 Zm00001e001473 SOQ1 non-photochemical quenching regulator protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0110102 ribulose bisphosphate carboxylase complex assembly IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR012336 Thioredoxin-like_fold 460 554
IPR041492 HAD_2 100 283
IPR001258 NHL_repeat 861 886
IPR001258 NHL_repeat 663 689
No external refs found!