Pnu_g13953 (GALT1)

Aliases : GALT1

Description : not classified & original description: none

Gene families : OG0000727 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000727_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pnu_g13953
Cluster	HCCA: Cluster_47

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00239510	evm_27.TU.AmTr_v1...	Cell wall.cell wall proteins.hydroxyproline-rich...	0.02	OrthoFinder output from all 47 species
AT3G06440	No alias	Galactosyltransferase family protein	0.03	OrthoFinder output from all 47 species
Adi_g109486	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g17641	No alias	hydroxyproline O-galactosyltransferase *(GALT) &...	0.03	OrthoFinder output from all 47 species
Aop_g05582	No alias	hydroxyproline O-galactosyltransferase *(GALT) &...	0.02	OrthoFinder output from all 47 species
Aspi01Gene63669.t2	GALT1, Aspi01Gene63669	not classified & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01011424001	GALT1	Protein modification.N-linked glycosylation.complex...	0.03	OrthoFinder output from all 47 species
LOC_Os12g17370.1	LOC_Os12g17370	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Len_g14245	GALT1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_103401g0010	No alias	hydroxyproline-O-galactosyltransferase (GALT). AGP...	0.03	OrthoFinder output from all 47 species
MA_10435969g0020	GALT1	Beta-1,3-galactosyltransferase GALT1 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Ore_g35976	GALT1	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g16236	No alias	hydroxyproline O-galactosyltransferase *(GALT) &...	0.02	OrthoFinder output from all 47 species
Pir_g18677	No alias	hydroxyproline O-galactosyltransferase *(GALT) &...	0.04	OrthoFinder output from all 47 species
Solyc03g113520.3.1	Solyc03g113520	hydroxyproline-O-galactosyltransferase (GALT). AGP...	0.05	OrthoFinder output from all 47 species
Zm00001e011403_P001	Zm00001e011403	hydroxyproline-O-galactosyltransferase (GALT). AGP...	0.02	OrthoFinder output from all 47 species
Zm00001e011406_P001	Zm00001e011406	hydroxyproline-O-galactosyltransferase (GALT). AGP...	0.02	OrthoFinder output from all 47 species
Zm00001e018130_P001	Zm00001e018130	hydroxyproline-O-galactosyltransferase (GALT). AGP...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006486	protein glycosylation	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	IEA	Interproscan
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043413	macromolecule glycosylation	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070085	glycosylation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0005509	calcium ion binding	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
MF	GO:0033926	glycopeptide alpha-N-acetylgalactosaminidase activity	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
MF	GO:0140103	catalytic activity, acting on a glycoprotein	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001079	Galectin_CRD	200	390
IPR002659	Glyco_trans_31	435	619

External Links

No external refs found!

Pnu_g13953 (GALT1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation