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Heatmap: Cluster_47 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Aerial Stem
Mature Aerial Stem
Syangia
Rhizome
- 0.06 - 1.57
-1.16 -1.48 -0.09 1.17
-1.46 -0.13 -2.63 1.36
-1.86 0.27 -4.16 1.3
-1.93 -0.76 -1.88 1.52
-1.28 -0.16 -0.13 0.83
-5.01 -3.79 -1.15 1.78
-1.17 -0.45 -3.26 1.44
Pnu_g03058 (RPT6A)
 -0.17 -0.04 -0.11 0.28
Pnu_g03091 (BRH1)
 -1.69 -0.67 0.3 0.87
-0.53 -0.31 -0.35 0.78
Pnu_g03355 (HB-2)
 -2.5 -0.93 -0.43 1.35
-1.47 -1.4 0.17 1.09
-1.47 -0.91 -2.43 1.55
-1.12 -1.13 0.24 0.93
-1.33 -0.76 -2.21 1.48
-0.11 -0.32 -0.1 0.42
- -0.72 - 1.76
-3.01 -0.2 -4.14 1.56
-2.9 -1.75 -6.45 1.83
-4.25 -1.47 - 1.84
-0.66 -0.65 0.28 0.6
- -2.12 -3.64 1.88
- -2.27 -1.61 1.79
- 0.24 - 1.5
Pnu_g06083 (SCZ)
 -1.0 -0.43 -2.25 1.35
-2.04 -0.85 -2.08 1.57
-0.52 -0.42 -0.49 0.88
Pnu_g07350 (HEC3)
 -0.54 -0.67 -0.39 0.94
Pnu_g07415 (BIR1)
 -1.8 -0.62 -2.18 1.51
-0.81 -1.14 -0.47 1.17
-0.27 -0.9 -0.7 1.01
-1.06 -1.65 -1.59 1.52
-0.56 -0.82 -2.11 1.34
-0.46 -0.23 -1.05 0.95
Pnu_g08098 (CHS)
 -1.19 -1.24 -2.22 1.55
Pnu_g08285 (UNE14)
 -2.19 -1.34 0.27 1.13
-3.25 -0.4 -3.24 1.6
-0.97 -1.23 -1.58 1.45
Pnu_g08735 (EDR3)
 -0.52 -0.12 0.07 0.42
Pnu_g08845 (TGA2)
 -1.1 -0.93 -0.16 1.08
Pnu_g09046 (TGA2)
 -0.69 -0.27 0.1 0.56
-1.04 -0.11 -0.55 0.93
Pnu_g10646 (UNE14)
 -5.84 -0.77 -0.12 1.31
-0.62 -0.67 -2.55 1.35
Pnu_g10984 (D6PK)
 -0.59 -0.53 -2.3 1.29
-0.42 0.02 -1.02 0.81
Pnu_g11593 (MYB3)
 -0.38 -0.91 -1.01 1.14
Pnu_g12046 (FUT4)
 -0.78 -1.29 -0.81 1.29
-2.22 -1.64 0.4 1.1
Pnu_g13510 (CRLK1)
 -0.13 -0.16 0.09 0.17
-3.44 -1.47 - 1.83
Pnu_g13689 (OFP6)
 -2.29 -1.74 0.01 1.31
Pnu_g13953 (GALT1)
 -0.78 -0.28 0.05 0.64
-1.87 -0.06 -0.21 0.93
-0.38 -0.62 -0.21 0.78
Pnu_g14041 (CINV2)
 -0.96 -0.36 -0.0 0.77
- - - 2.0
Pnu_g14377 (NAI1)
 -0.56 -0.97 -1.39 1.28
- - - 2.0
- -7.81 -5.85 1.99
-3.97 -1.02 -2.33 1.7
-2.14 -0.2 -0.3 1.06
Pnu_g14701 (ILR3)
 -4.77 -1.09 - 1.8
-2.47 -1.9 0.65 0.99
-4.54 -0.99 - 1.79
-4.71 -1.62 -4.79 1.85
-1.61 -0.61 -1.43 1.4
-0.81 -1.55 -2.61 1.55
-3.74 -2.17 -0.05 1.45
- - - 2.0
-3.58 -1.29 -3.12 1.76
Pnu_g15468 (NAC3)
 -2.48 -1.23 -1.39 1.59
Pnu_g15485 (ATHB13)
 -1.23 -0.97 -0.13 1.11
Pnu_g15606 (TUB5)
 -1.53 -0.59 -3.39 1.53
Pnu_g15652 (UGT85A1)
 -3.31 -3.86 0.32 1.37
Pnu_g15666 (CPK1)
 -0.31 -0.21 0.05 0.37
Pnu_g15686 (COX1)
 -3.42 -1.32 -3.7 1.78
-1.95 -0.44 -2.92 1.52
-3.09 -0.95 -4.02 1.72
- - - 2.0
-0.67 -0.33 -0.18 0.76
-0.83 0.09 -1.97 1.08
- 0.17 - 1.52
-2.12 -0.09 -3.48 1.46
- -1.19 -0.95 1.61
Pnu_g16230 (ACT11)
 -1.43 -1.33 - 1.69
-1.74 -2.63 -3.78 1.79
-2.22 -0.55 -1.28 1.43
-1.63 -1.21 -0.98 1.45
-0.47 -0.46 -1.51 1.14
-2.88 - -0.81 1.72
-3.02 -2.7 0.64 1.12
- - - 2.0
Pnu_g16733 (WRKY4)
 -0.39 -0.2 0.06 0.41
Pnu_g16743 (OMT1)
 -0.92 -1.11 -2.57 1.51
-1.68 -0.82 - 1.64
-1.38 -0.36 - 1.51
-1.86 -1.83 -6.37 1.78
Pnu_g17109 (ACT11)
 -2.97 -1.33 -1.52 1.64
- -2.06 - 1.91
-1.78 -1.1 0.16 1.09
-1.46 -0.49 -1.03 1.28
Pnu_g17566 (UGT85A7)
 -5.44 -3.92 -1.48 1.83
-1.95 -0.87 -4.92 1.66
-5.78 -3.24 -4.66 1.94
-0.05 -0.71 -0.5 0.78
-1.59 -0.52 0.14 0.9
Pnu_g17829 (UGT85A1)
 -2.8 -0.56 0.24 1.0
-1.18 -0.14 -2.65 1.32
-0.65 -0.53 -0.1 0.79
-0.46 -1.07 -3.06 1.42
Pnu_g18118 (UGT84A3)
 -3.67 -3.5 0.57 1.23
Pnu_g18246 (COX1)
 -4.72 - - 1.99
-3.05 -2.98 -3.12 1.86
-2.79 -1.95 -2.7 1.78
-3.17 -0.43 -3.91 1.62
-0.94 -1.08 -0.15 1.07
-3.68 -4.51 -4.64 1.94
Pnu_g18662 (HCT)
 -0.89 -1.44 -1.17 1.4
Pnu_g18731 (WRKY42)
 -2.72 -1.39 -2.83 1.73
Pnu_g18736 (DXR)
 -0.57 -1.52 0.19 0.87
-5.12 -2.53 - 1.93
-1.15 -0.52 -1.62 1.34
-1.23 -1.95 -2.2 1.63
-3.36 -0.97 - 1.76
Pnu_g19356 (PUB26)
 -0.53 -0.62 -1.06 1.12
-1.89 -2.39 - 1.82
-4.51 - -4.56 1.97
Pnu_g19629 (ACT11)
 -1.46 -0.81 -3.34 1.57
-0.65 -0.54 0.09 0.69
-2.07 -2.28 0.57 1.05
-1.07 -2.0 -1.03 1.48
-3.51 -1.39 -2.3 1.73
Pnu_g20039 (GAPCP-2)
 -0.63 -0.91 -0.15 0.94
-1.36 -1.5 -2.85 1.64
Pnu_g20300 (FUC1)
 -3.97 -1.08 -0.79 1.53
Pnu_g20362 (AR411)
 -6.17 -4.75 0.24 1.47
-2.14 -0.29 -1.91 1.43
Pnu_g20547 (ACT11)
 -3.74 -1.43 -3.79 1.8
-4.43 -3.34 -0.89 1.73
-1.0 -1.7 -1.82 1.54
-3.49 -2.8 -1.02 1.71
-1.21 -0.64 -1.62 1.38
-0.69 -0.36 0.11 0.6
-3.05 -0.92 -3.81 1.71
- - 0.4 1.42
-2.94 -1.78 0.35 1.21
- -2.76 0.75 1.12
-0.44 -0.06 -1.21 0.9
-0.98 -0.98 -1.05 1.32
-1.96 -1.28 0.14 1.16
-0.73 -0.41 -1.77 1.23
-1.79 -1.04 -0.83 1.41
Pnu_g25235 (GATA5)
 -0.27 -0.88 -0.26 0.84
-0.37 0.03 -0.46 0.57
-3.18 -1.61 0.15 1.3
-1.08 -0.9 -2.53 1.49
-0.61 -0.44 -0.99 1.07
Pnu_g27982 (CAM6)
 -0.84 -0.51 -0.55 1.04
Pnu_g28935 (OMT1)
 -2.3 -2.79 -1.82 1.75
-4.57 -1.79 0.69 1.04
-0.52 -0.35 -8.5 1.33
-1.02 -1.25 -1.6 1.46
-0.54 -0.12 -0.6 0.79
Pnu_g30108 (GATA12)
 -1.85 0.34 -3.71 1.25
-1.02 -1.06 -0.1 1.07
-2.04 -0.91 0.22 1.04
-0.58 -0.46 0.11 0.61
-1.0 -1.22 -0.35 1.19
Pnu_g33721 (FMA)
 -1.01 -0.25 -0.11 0.79

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.