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  5. Als_g25942

Als_g25942


Description : autophagosome cargo receptor protein *(NBR1) & original description: none


Gene families : OG0000431 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000431_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g25942

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021275.7 No alias Vesicle trafficking.autophagosome formation.cargo... 0.02 OrthoFinder output from all 47 species
Ehy_g27533 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10436174g0020 No alias NBR1 autophagosome autophagic adapter protein 0.05 OrthoFinder output from all 47 species
Msp_g26552 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g11527 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.03 OrthoFinder output from all 47 species
Sam_g51663 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.02 OrthoFinder output from all 47 species
Smo236729 No alias Vesicle trafficking.autophagosome formation.cargo... 0.03 OrthoFinder output from all 47 species
Spa_g05546 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.02 OrthoFinder output from all 47 species
Tin_g09509 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR032350 N_BRCA1_central 344 445
IPR000433 Znf_ZZ 219 262
IPR000270 PB1_dom 25 74
No external refs found!