Aliases : STV1, RPL24, RPL24B
Description : component *(eL24) of large ribosomal-subunit (LSU) proteome & original description: none
Gene families : OG0002539 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002539_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00069p00095150 | RPL24A,... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.04 | OrthoFinder output from all 47 species | |
AT2G36620 | RPL24A | ribosomal protein L24 | 0.05 | OrthoFinder output from all 47 species | |
AT3G53020 | STV1, RPL24, RPL24B | Ribosomal protein L24e family protein | 0.05 | OrthoFinder output from all 47 species | |
Als_g23672 | RPL24A | component *(eL24) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.27G010000.1 | STV1, RPL24,... | component *(eL24) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Cre09.g391097 | STV1, RPL24, RPL24B | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g13575 | RPL24A | component *(eL24) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01010601001 | RPL24A | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01033743001 | STV1, RPL24, RPL24B | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01034676001 | RPL24A | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.04 | OrthoFinder output from all 47 species | |
Gb_07396 | STV1, RPL24, RPL24B | pri-miRNA recruitment factor (STV1). component RPL24 of... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g59990.1 | STV1, RPL24,... | pri-miRNA recruitment factor (STV1). component RPL24 of... | 0.03 | OrthoFinder output from all 47 species | |
Mp5g17510.1 | RPL24A | pri-miRNA recruitment factor (STV1). component RPL24 of... | 0.03 | OrthoFinder output from all 47 species | |
Pp3c13_10770V3.1 | RPL24A, Pp3c13_10770 | ribosomal protein L24 | 0.02 | OrthoFinder output from all 47 species | |
Solyc09g008800.3.1 | STV1, RPL24,... | pri-miRNA recruitment factor (STV1). component RPL24 of... | 0.03 | OrthoFinder output from all 47 species | |
Solyc10g083740.3.1 | STV1, RPL24,... | pri-miRNA recruitment factor (STV1). component RPL24 of... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g03066 | RPL24A | component *(eL24) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
Tin_g23099 | STV1, RPL24, RPL24B | component *(eL24) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e004947_P001 | STV1, RPL24,... | pri-miRNA recruitment factor (STV1). component RPL24 of... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e012463_P004 | STV1, RPL24,... | pri-miRNA recruitment factor (STV1). component RPL24 of... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e027315_P001 | STV1, RPL24,... | pri-miRNA recruitment factor (STV1). component RPL24 of... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000123 | histone acetyltransferase complex | IEP | HCCA |
CC | GO:0000124 | SAGA complex | IEP | HCCA |
MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
MF | GO:0003713 | transcription coactivator activity | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
CC | GO:0005643 | nuclear pore | IEP | HCCA |
CC | GO:0005839 | proteasome core complex | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006405 | RNA export from nucleus | IEP | HCCA |
BP | GO:0006406 | mRNA export from nucleus | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006810 | transport | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
BP | GO:0006913 | nucleocytoplasmic transport | IEP | HCCA |
BP | GO:0008104 | protein localization | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
BP | GO:0009891 | positive regulation of biosynthetic process | IEP | HCCA |
BP | GO:0009893 | positive regulation of metabolic process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0015031 | protein transport | IEP | HCCA |
BP | GO:0015931 | nucleobase-containing compound transport | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
CC | GO:0031248 | protein acetyltransferase complex | IEP | HCCA |
BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0033036 | macromolecule localization | IEP | HCCA |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
BP | GO:0045893 | positive regulation of DNA-templated transcription | IEP | HCCA |
BP | GO:0045935 | positive regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
BP | GO:0048518 | positive regulation of biological process | IEP | HCCA |
BP | GO:0048522 | positive regulation of cellular process | IEP | HCCA |
BP | GO:0050657 | nucleic acid transport | IEP | HCCA |
BP | GO:0050658 | RNA transport | IEP | HCCA |
BP | GO:0051028 | mRNA transport | IEP | HCCA |
BP | GO:0051168 | nuclear export | IEP | HCCA |
BP | GO:0051169 | nuclear transport | IEP | HCCA |
BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
BP | GO:0051236 | establishment of RNA localization | IEP | HCCA |
BP | GO:0051254 | positive regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
CC | GO:0070461 | SAGA-type complex | IEP | HCCA |
BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
BP | GO:0071702 | organic substance transport | IEP | HCCA |
BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
CC | GO:1902493 | acetyltransferase complex | IEP | HCCA |
CC | GO:1902494 | catalytic complex | IEP | HCCA |
BP | GO:1902680 | positive regulation of RNA biosynthetic process | IEP | HCCA |
BP | GO:1903508 | positive regulation of nucleic acid-templated transcription | IEP | HCCA |
CC | GO:1905368 | peptidase complex | IEP | HCCA |
CC | GO:1990234 | transferase complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000988 | Ribosomal_L24e-rel | 4 | 67 |
No external refs found! |