Als_g20620


Description : RsmG-type rRNA methyltransferase & original description: none


Gene families : OG0007796 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007796_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g20620

Target Alias Description ECC score Gene Family Method Actions
Ala_g17218 No alias RsmG-type rRNA methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020927.46 No alias No description available 0.02 OrthoFinder output from all 47 species
Dde_g07760 No alias RsmG-type rRNA methyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Mp7g11310.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc03g113860.2.1 Solyc03g113860 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0006364 rRNA processing IEA Interproscan
MF GO:0008649 rRNA methyltransferase activity IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR003682 rRNA_ssu_MeTfrase_G 60 246
No external refs found!