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  5. Als_g14409

Als_g14409


Description : not classified & original description: none


Gene families : OG0007250 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007250_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g14409

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00101p00121540 evm_27.TU.AmTr_v1... PsbP domain-containing protein 6, chloroplastic... 0.05 OrthoFinder output from all 47 species
AT3G56650 No alias Mog1/PsbP/DUF1795-like photosystem II reaction center... 0.03 OrthoFinder output from all 47 species
Adi_g015482 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g02932 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g00819 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02884 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g13163 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g31306 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g00607 No alias not classified & original description: none 0.18 OrthoFinder output from all 47 species
Dde_g25294 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g00686 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01025792001 No alias PsbP domain-containing protein 6, chloroplastic... 0.05 OrthoFinder output from all 47 species
LOC_Os01g59090.1 LOC_Os01g59090 PsbP domain-containing protein 6, chloroplastic... 0.04 OrthoFinder output from all 47 species
Len_g07272 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Lfl_g12167 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g47911 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g07469 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g09687 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27494 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g65891 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g12133 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61363 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Solyc06g065490.3.1 Solyc06g065490 PsbP domain-containing protein 6, chloroplastic... 0.06 OrthoFinder output from all 47 species
Spa_g17127 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g21578 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Zm00001e019532_P001 Zm00001e019532 PsbP domain-containing protein 6, chloroplastic... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0019898 extrinsic component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0034311 diol metabolic process IEP HCCA
BP GO:0034312 diol biosynthetic process IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
BP GO:0042559 pteridine-containing compound biosynthetic process IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046146 tetrahydrobiopterin metabolic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046173 polyol biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002683 PsbP_C 142 298
No external refs found!